RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 NCS6P53088 359 aa3.38□□□□□ -1.87
snR43snR43 CWC15Q03772 175 aaKnown RBP3.38□□□□□ -1.87
snR43snR43 SYF1Q04048 859 aaPredicted RBP3.38□□□□□ -1.87
snR43snR43 YDR444WQ04093 687 aa3.38□□□□□ -1.87
snR43snR43 SUB2Q07478 446 aaKnown RBP3.38□□□□□ -1.87
snR43snR43 BDS1Q08347 646 aa3.38□□□□□ -1.87
snR43snR43 ALE1Q08548 619 aa3.38□□□□□ -1.87
snR43snR43 WTM2Q12206 467 aa3.38□□□□□ -1.87
snR43snR43 UTP10P42945 1769 aaKnown RBP3.38□□□□□ -1.87
snR43snR43 NTH2P35172 780 aa3.37□□□□□ -1.87
snR43snR43 ATG3P40344 310 aa3.37□□□□□ -1.87
snR43snR43 LCB5Q06147 687 aaKnown RBP3.37□□□□□ -1.87
snR43snR43 LYS2P07702 1392 aa3.37□□□□□ -1.87
snR43snR43 STE6P12866 1290 aa3.36□□□□□ -1.87
snR43snR43 MOT2P34909 587 aaKnown RBP3.36□□□□□ -1.87
snR43snR43 AIM9P40053 627 aaKnown RBP3.36□□□□□ -1.87
snR43snR43 HAT1Q12341 374 aa3.36□□□□□ -1.87
snR43snR43 GAL2P13181 574 aa3.35□□□□□ -1.87
snR43snR43 FRD1P32614 470 aaKnown RBP3.35□□□□□ -1.87
snR43snR43 AAD14P42884 376 aa3.35□□□□□ -1.87
snR43snR43 RRT6P53117 311 aaPredicted RBP3.35□□□□□ -1.87
snR43snR43 TRM44Q02648 567 aaKnown RBP3.35□□□□□ -1.87
snR43snR43 YDL176WQ12027 708 aa3.35□□□□□ -1.87
snR43snR43 CSR2Q12734 1121 aa3.35□□□□□ -1.87
snR43snR43 PMD1P32634 1753 aa3.35□□□□□ -1.87
snR43snR43 MLP1Q02455 1875 aaKnown RBP3.35□□□□□ -1.87
snR43snR43 ARG82P07250 355 aa3.34□□□□□ -1.87
snR43snR43 SWI5P08153 709 aa3.34□□□□□ -1.87
snR43snR43 HPR1P17629 752 aaKnown RBP3.34□□□□□ -1.87
snR43snR43 PHO87P25360 923 aa3.34□□□□□ -1.87
snR43snR43 STV1P37296 890 aa3.34□□□□□ -1.87
snR43snR43 APE3P37302 537 aaKnown RBP3.34□□□□□ -1.87
snR43snR43 TBS1P38114 1094 aa3.34□□□□□ -1.87
snR43snR43 SLX8P40072 274 aa3.34□□□□□ -1.87
snR43snR43 VPS4P52917 437 aa3.34□□□□□ -1.87
snR43snR43 ROM1P53046 1155 aa3.34□□□□□ -1.87
snR43snR43 PDS5Q04264 1277 aa3.34□□□□□ -1.87
snR43snR43 CRF1Q04930 467 aa3.34□□□□□ -1.87
snR43snR43 UTP13Q05946 817 aaKnown RBP3.34□□□□□ -1.87
snR43snR43 RPS6AP0CX37 236 aaKnown RBP3.33□□□□□ -1.88
snR43snR43 RPS6BP0CX38 236 aaPredicted RBP3.33□□□□□ -1.88
snR43snR43 KRE2P27809 442 aa3.33□□□□□ -1.88
snR43snR43 AFG2P32794 780 aa3.33□□□□□ -1.88
snR43snR43 APL2P36000 726 aaPredicted RBP3.33□□□□□ -1.88
snR43snR43 DLD3P39976 496 aaKnown RBP3.33□□□□□ -1.88
snR43snR43 PAP2P53632 584 aaKnown RBP3.33□□□□□ -1.88
snR43snR43 YNL050CP53952 270 aa3.33□□□□□ -1.88
snR43snR43 UBX2Q04228 584 aa3.33□□□□□ -1.88
snR43snR43 NSE3Q05541 303 aa3.33□□□□□ -1.88
snR43snR43 GAS5Q08193 484 aa3.33□□□□□ -1.88
snR43snR43 RRG1Q12167 365 aaPredicted RBP3.33□□□□□ -1.88
snR43snR43 TSC13Q99190 310 aa3.33□□□□□ -1.88
snR43snR43 SPT2P06843 333 aaPredicted RBP3.32□□□□□ -1.88
snR43snR43 PAM1P37304 830 aaKnown RBP3.32□□□□□ -1.88
snR43snR43 MAL31P38156 614 aa3.32□□□□□ -1.88
snR43snR43 TPS3P38426 1054 aaKnown RBP3.32□□□□□ -1.88
snR43snR43 PNT1P38969 423 aa3.32□□□□□ -1.88
snR43snR43 ALA1P40825 983 aaKnown RBP3.32□□□□□ -1.88
snR43snR43 OPT2Q06593 877 aa3.32□□□□□ -1.88
snR43snR43 HAP4P14064 554 aa3.31□□□□□ -1.88
snR43snR43 SIS2P36024 562 aa3.31□□□□□ -1.88
snR43snR43 ICP55P40051 511 aa3.31□□□□□ -1.88
snR43snR43 YJR098CP47139 656 aa3.31□□□□□ -1.88
snR43snR43 RRP46P53256 223 aaPredicted RBP3.31□□□□□ -1.88
snR43snR43 RBA50Q04418 439 aa3.31□□□□□ -1.88
snR43snR43 DPH6Q12429 685 aa3.31□□□□□ -1.88
snR43snR43 FAS2P19097 1887 aaKnown RBP3.3□□□□□ -1.88
snR43snR43 NUM1Q00402 2748 aa3.3□□□□□ -1.88
snR43snR43 FLO11P08640 1367 aa3.3□□□□□ -1.88
snR43snR43 CYT1P07143 309 aa3.3□□□□□ -1.88
snR43snR43 CBP1P07252 654 aa3.3□□□□□ -1.88
snR43snR43 SPL2P38839 148 aa3.3□□□□□ -1.88
snR43snR43 NUP85P46673 744 aa3.3□□□□□ -1.88
snR43snR43 PRP42Q03776 544 aaKnown RBP3.3□□□□□ -1.88
snR43snR43 HKR1P41809 1802 aa3.3□□□□□ -1.88
snR43snR43 YPR117WQ06116 2489 aa3.29□□□□□ -1.88
snR43snR43 SAC3P46674 1301 aa3.29□□□□□ -1.88
snR43snR43 SUV3P32580 737 aa3.29□□□□□ -1.88
snR43snR43 SSN3P39073 555 aa3.29□□□□□ -1.88
snR43snR43 ACO2P39533 789 aa3.29□□□□□ -1.88
snR43snR43 MAM1P40065 302 aa3.29□□□□□ -1.88
snR43snR43 YFL034WP43564 1073 aa3.29□□□□□ -1.88
snR43snR43 SUM1P46676 1062 aa3.29□□□□□ -1.88
snR43snR43 YJR008WP47085 338 aa3.29□□□□□ -1.88
snR43snR43 LSC2P53312 427 aa3.29□□□□□ -1.88
snR43snR43 YNL165WP53891 406 aa3.29□□□□□ -1.88
snR43snR43 ZDS2P54786 942 aa3.29□□□□□ -1.88
snR43snR43 RPL34AP87262 121 aaPredicted RBP3.29□□□□□ -1.88
snR43snR43 YLR225CQ05948 407 aaKnown RBP3.29□□□□□ -1.88
snR43snR43 PUN1Q06991 263 aa3.29□□□□□ -1.88
snR43snR43 TY1A-DR3Q12441 440 aa3.29□□□□□ -1.88
snR43snR43 SHM1P37292 490 aaPredicted RBP3.28□□□□□ -1.88
snR43snR43 MTC3P53077 123 aa3.28□□□□□ -1.88
snR43snR43 DNM1P54861 757 aa3.28□□□□□ -1.88
snR43snR43 YVH1Q02256 364 aaKnown RBP3.28□□□□□ -1.88
snR43snR43 VPS64Q03944 604 aa3.28□□□□□ -1.88
snR43snR43 IOC4Q04213 475 aa3.28□□□□□ -1.88
snR43snR43 YOL057WQ08225 711 aa3.28□□□□□ -1.88
snR43snR43 TAO3P40468 2376 aa3.27□□□□□ -1.89
snR43snR43 SWI1P09547 1314 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms