RNA–Protein interactions for RNA: YPR036W

VMA13, Transcript of Subunit H of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA13, Length 1,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA13YPR036W ZDS2P54786 942 aa6.33□□□□□ -1.4
VMA13YPR036W OSM1P21375 501 aaKnown RBP6.33□□□□□ -1.4
VMA13YPR036W RRN7P40992 514 aa6.33□□□□□ -1.4
VMA13YPR036W RPN4Q03465 531 aa6.33□□□□□ -1.4
VMA13YPR036W YDR444WQ04093 687 aa6.33□□□□□ -1.4
VMA13YPR036W ALE1Q08548 619 aa6.33□□□□□ -1.4
VMA13YPR036W YRF1-3P0CX14 1859 aa6.32□□□□□ -1.4
VMA13YPR036W YRF1-7P0CX15 1859 aa6.32□□□□□ -1.4
VMA13YPR036W YRF1-6P53819 1859 aa6.32□□□□□ -1.4
VMA13YPR036W THS1P04801 734 aaKnown RBP6.32□□□□□ -1.4
VMA13YPR036W SWC3P31376 625 aa6.32□□□□□ -1.4
VMA13YPR036W VMS1Q04311 632 aaKnown RBP6.32□□□□□ -1.4
VMA13YPR036W YDR306CQ06640 478 aa6.32□□□□□ -1.4
VMA13YPR036W TY4B-PA0A0B7P3V8 1104 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-DR4O74302 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-HP0C2I4 478 aaKnown RBP6.31□□□□□ -1.4
VMA13YPR036W TY1A-AP0CX57 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-PR1P0CX58 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-ORP0CX59 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-PR2P0CX60 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-DR5P0CX65 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-ER2P0CX66 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-GR3P0CX67 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-LR1P0CX68 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-MR2P0CX69 440 aa6.31□□□□□ -1.4
VMA13YPR036W MRP7P12687 371 aa6.31□□□□□ -1.4
VMA13YPR036W YHL050CP38721 697 aa6.31□□□□□ -1.4
VMA13YPR036W YHR219WP38900 624 aa6.31□□□□□ -1.4
VMA13YPR036W MNN1P39106 762 aa6.31□□□□□ -1.4
VMA13YPR036W YJL049WP47048 450 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-JR2P47099 440 aa6.31□□□□□ -1.4
VMA13YPR036W ALD3P54114 506 aa6.31□□□□□ -1.4
VMA13YPR036W FOX2Q02207 900 aaKnown RBP6.31□□□□□ -1.4
VMA13YPR036W TY1A-DR1Q03856 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-ML1Q04706 440 aaKnown RBP6.31□□□□□ -1.4
VMA13YPR036W TY1A-BRQ12217 440 aa6.31□□□□□ -1.4
VMA13YPR036W STB3Q12427 513 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-NL2Q12470 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY1A-GR2Q12485 440 aa6.31□□□□□ -1.4
VMA13YPR036W TY4A-HQ6Q5P6 413 aa6.31□□□□□ -1.4
VMA13YPR036W LYS2P07702 1392 aa6.31□□□□□ -1.4
VMA13YPR036W SEC2P17065 759 aa6.3□□□□□ -1.4
VMA13YPR036W YKL133CP36066 463 aa6.3□□□□□ -1.4
VMA13YPR036W PPX1P38698 397 aa6.3□□□□□ -1.4
VMA13YPR036W UBP12P39538 1254 aa6.3□□□□□ -1.4
VMA13YPR036W YNL108CP53929 270 aa6.3□□□□□ -1.4
VMA13YPR036W SVL3Q03088 825 aaKnown RBP6.3□□□□□ -1.4
VMA13YPR036W HED1Q03937 162 aa6.3□□□□□ -1.4
VMA13YPR036W UTP14Q04500 899 aaKnown RBP6.3□□□□□ -1.4
VMA13YPR036W NKP2Q06162 153 aa6.3□□□□□ -1.4
VMA13YPR036W STI1P15705 589 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
VMA13YPR036W MAL31P38156 614 aa6.29□□□□□ -1.4
VMA13YPR036W MGE1P38523 228 aa6.29□□□□□ -1.4
VMA13YPR036W RFC1P38630 861 aaKnown RBP6.29□□□□□ -1.4
VMA13YPR036W BUD6P41697 788 aa6.29□□□□□ -1.4
VMA13YPR036W YJR142WP47173 342 aa6.29□□□□□ -1.4
VMA13YPR036W ITC1P53125 1264 aa6.29□□□□□ -1.4
VMA13YPR036W MEC3Q02574 474 aa6.29□□□□□ -1.4
VMA13YPR036W SYH1Q02875 849 aaKnown RBP6.28□□□□□ -1.4
VMA13YPR036W SNU66Q12420 587 aaPredicted RBP6.28□□□□□ -1.4
VMA13YPR036W ROM2P51862 1356 aaKnown RBP6.28□□□□□ -1.4
VMA13YPR036W GCD7P32502 381 aaPredicted RBP6.27□□□□□ -1.41
VMA13YPR036W TGL4P36165 910 aa6.27□□□□□ -1.41
VMA13YPR036W YEN1P40028 759 aa6.27□□□□□ -1.41
VMA13YPR036W FAF1P40546 346 aaPredicted RBP6.27□□□□□ -1.41
VMA13YPR036W EAF6P47128 113 aa6.27□□□□□ -1.41
VMA13YPR036W YJR107WP47145 328 aa6.27□□□□□ -1.41
VMA13YPR036W ALD6P54115 500 aaKnown RBP6.27□□□□□ -1.41
VMA13YPR036W ATG13Q06628 738 aa6.27□□□□□ -1.41
VMA13YPR036W WHI5Q12416 295 aa6.27□□□□□ -1.41
VMA13YPR036W YOR131CQ12486 218 aa6.27□□□□□ -1.41
VMA13YPR036W SWI1P09547 1314 aa6.27□□□□□ -1.41
VMA13YPR036W POM152P39685 1337 aa6.27□□□□□ -1.41
VMA13YPR036W PCT1P13259 424 aa6.26□□□□□ -1.41
VMA13YPR036W KTR1P27810 393 aaKnown RBP6.26□□□□□ -1.41
VMA13YPR036W PRP40P33203 583 aaKnown RBP6.26□□□□□ -1.41
VMA13YPR036W NUP133P36161 1157 aa6.26□□□□□ -1.41
VMA13YPR036W PBP2P38151 413 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
VMA13YPR036W MUM2P38236 366 aa6.26□□□□□ -1.41
VMA13YPR036W GLO3P38682 493 aaKnown RBP6.26□□□□□ -1.41
VMA13YPR036W NMD3P38861 518 aaKnown RBP6.26□□□□□ -1.41
VMA13YPR036W MSH4P40965 878 aaPredicted RBP6.26□□□□□ -1.41
VMA13YPR036W YBP2P53169 641 aa6.26□□□□□ -1.41
VMA13YPR036W MDM1Q01846 1127 aa6.26□□□□□ -1.41
VMA13YPR036W MET6P05694 767 aaKnown RBP6.25□□□□□ -1.41
VMA13YPR036W TRL1P09880 827 aaKnown RBP6.25□□□□□ -1.41
VMA13YPR036W SWI3P32591 825 aa6.25□□□□□ -1.41
VMA13YPR036W APL2P36000 726 aaPredicted RBP6.25□□□□□ -1.41
VMA13YPR036W MET1P36150 593 aa6.25□□□□□ -1.41
VMA13YPR036W TEA1P47988 759 aa6.25□□□□□ -1.41
VMA13YPR036W RMT2Q03305 412 aa6.25□□□□□ -1.41
VMA13YPR036W VPS64Q03944 604 aa6.25□□□□□ -1.41
VMA13YPR036W RAD50P12753 1312 aa6.25□□□□□ -1.41
VMA13YPR036W COBP00163 385 aa6.25□□□□□ -1.41
VMA13YPR036W LPD1P09624 499 aaKnown RBP6.25□□□□□ -1.41
VMA13YPR036W CDC16P09798 840 aa6.25□□□□□ -1.41
VMA13YPR036W SUP45P12385 437 aaKnown RBP6.25□□□□□ -1.41
VMA13YPR036W MRC1P25588 1096 aa6.25□□□□□ -1.41
VMA13YPR036W TFC3P34111 1160 aa6.25□□□□□ -1.41
VMA13YPR036W ORC6P38826 435 aa6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 100 ms