RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL40	YPL173W	PEX7	P39108	375 aa		5.05	□□□□□ -1.6
MRPL40	YPL173W	MSH4	P40965	878 aa	Predicted RBP	5.05	□□□□□ -1.6
MRPL40	YPL173W	MSH6	Q03834	1242 aa		5.05	□□□□□ -1.6
MRPL40	YPL173W	AIM3	P38266	947 aa	Known RBP	5.04	□□□□□ -1.6
MRPL40	YPL173W	YVC1	Q12324	675 aa		5.04	□□□□□ -1.6
MRPL40	YPL173W	COB	P00163	385 aa		5.03	□□□□□ -1.6
MRPL40	YPL173W	HTS1	P07263	546 aa	Known RBP	5.03	□□□□□ -1.6
MRPL40	YPL173W	YML083C	Q04526	418 aa		5.03	□□□□□ -1.6
MRPL40	YPL173W	PRO1	P32264	428 aa		5.02	□□□□□ -1.61
MRPL40	YPL173W	RIM11	P38615	370 aa		5.02	□□□□□ -1.61
MRPL40	YPL173W	MEC3	Q02574	474 aa		5.02	□□□□□ -1.61
MRPL40	YPL173W	YDL177C	Q12257	170 aa		5.02	□□□□□ -1.61
MRPL40	YPL173W	CMR1	Q12510	522 aa	Known RBP	5.02	□□□□□ -1.61
MRPL40	YPL173W	NPR1	P22211	790 aa		5.01	□□□□□ -1.61
MRPL40	YPL173W	RIM8	P53179	542 aa		5.01	□□□□□ -1.61
MRPL40	YPL173W	MRPL22	P53881	309 aa		5.01	□□□□□ -1.61
MRPL40	YPL173W	PRP5	P21372	849 aa	Predicted RBP	5	□□□□□ -1.61
MRPL40	YPL173W	ALG6	Q12001	544 aa	Known RBP	5	□□□□□ -1.61
MRPL40	YPL173W	NFS1	P25374	497 aa		4.98	□□□□□ -1.61
MRPL40	YPL173W	DUR3	P33413	735 aa		4.98	□□□□□ -1.61
MRPL40	YPL173W	REI1	P38344	393 aa	Predicted RBP	4.98	□□□□□ -1.61
MRPL40	YPL173W	PTC7	P38797	343 aa		4.98	□□□□□ -1.61
MRPL40	YPL173W	UTP22	P53254	1237 aa	Predicted RBP	4.98	□□□□□ -1.61
MRPL40	YPL173W	SMY2	P32909	740 aa	Known RBP	4.97	□□□□□ -1.61
MRPL40	YPL173W	GSF2	Q04697	403 aa	Known RBP	4.97	□□□□□ -1.61
MRPL40	YPL173W	NOB1	Q08444	459 aa	Known RBP	4.97	□□□□□ -1.61
MRPL40	YPL173W	SOD2	P00447	233 aa		4.96	□□□□□ -1.62
MRPL40	YPL173W	BOL3	P39724	118 aa		4.95	□□□□□ -1.62
MRPL40	YPL173W	GTS1	P40956	396 aa		4.95	□□□□□ -1.62
MRPL40	YPL173W	YGR045C	P53229	120 aa		4.95	□□□□□ -1.62
MRPL40	YPL173W	SUB2	Q07478	446 aa	Known RBP	4.95	□□□□□ -1.62
MRPL40	YPL173W	FUR4	P05316	633 aa	Known RBP	4.94	□□□□□ -1.62
MRPL40	YPL173W	TOD6	P34219	525 aa		4.94	□□□□□ -1.62
MRPL40	YPL173W	ETP1	P38748	585 aa	Known RBP	4.94	□□□□□ -1.62
MRPL40	YPL173W	ELA1	P53861	379 aa	Predicted RBP	4.94	□□□□□ -1.62
MRPL40	YPL173W	NNK1	P36003	928 aa		4.93	□□□□□ -1.62
MRPL40	YPL173W	RSC4	Q02206	625 aa		4.93	□□□□□ -1.62
MRPL40	YPL173W	YPL277C	Q08989	487 aa		4.93	□□□□□ -1.62
MRPL40	YPL173W	ABZ1	P37254	787 aa	Predicted RBP	4.92	□□□□□ -1.62
MRPL40	YPL173W	TAD3	Q9URQ3	322 aa		4.92	□□□□□ -1.62
MRPL40	YPL173W	SSA1	P10591	642 aa	Known RBP	4.91	□□□□□ -1.62
MRPL40	YPL173W	ECM2	P38241	364 aa	Known RBP	4.91	□□□□□ -1.62
MRPL40	YPL173W	SAP155	P43612	1002 aa		4.91	□□□□□ -1.62
MRPL40	YPL173W	PUS7	Q08647	676 aa	Known RBP	4.91	□□□□□ -1.62
MRPL40	YPL173W	RPS13	P05756	151 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-DR6	P0CX70	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-ER1	P0CX71	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-LR2	P0CX72	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-PL	P0CX73	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-JR1	P0CX74	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-LR3	P0CX75	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-ML2	P0CX76	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	SSA4	P22202	642 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	ARL1	P38116	183 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	CLU1	Q03690	1277 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-GR1	Q12085	440 aa		4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	TY1A-OL	Q92392	440 aa	Known RBP	4.9	□□□□□ -1.63
MRPL40	YPL173W	GEF1	P37020	779 aa		4.89	□□□□□ -1.63
MRPL40	YPL173W	AVO1	Q08236	1176 aa		4.89	□□□□□ -1.63
MRPL40	YPL173W	TPP1	Q03796	238 aa		4.88	□□□□□ -1.63
MRPL40	YPL173W	SAM35	P14693	329 aa		4.87	□□□□□ -1.63
MRPL40	YPL173W	CTS1	P29029	562 aa		4.87	□□□□□ -1.63
MRPL40	YPL173W	SHM2	P37291	469 aa	Known RBP	4.87	□□□□□ -1.63
MRPL40	YPL173W	UFD2	P54860	961 aa		4.87	□□□□□ -1.63
MRPL40	YPL173W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
MRPL40	YPL173W	SNO2	P53823	222 aa		4.86	□□□□□ -1.63
MRPL40	YPL173W	YAF9	P53930	226 aa		4.86	□□□□□ -1.63
MRPL40	YPL173W	YLR358C	O13565	187 aa		4.85	□□□□□ -1.63
MRPL40	YPL173W	TUB2	P02557	457 aa	Known RBP	4.85	□□□□□ -1.63
MRPL40	YPL173W	YML020W	Q03722	664 aa		4.85	□□□□□ -1.63
MRPL40	YPL173W	PMT7	Q06644	662 aa		4.85	□□□□□ -1.63
MRPL40	YPL173W	NOP8	Q08287	484 aa	Predicted RBP	4.85	□□□□□ -1.63
MRPL40	YPL173W	FLP1	P03870	423 aa		4.84	□□□□□ -1.63
MRPL40	YPL173W	NUT1	P53114	1132 aa		4.84	□□□□□ -1.63
MRPL40	YPL173W	YHL012W	P38709	493 aa		4.83	□□□□□ -1.64
MRPL40	YPL173W	FOL2	P51601	243 aa	Known RBP	4.83	□□□□□ -1.64
MRPL40	YPL173W	PNS1	Q12412	539 aa		4.83	□□□□□ -1.64
MRPL40	YPL173W	GLO3	P38682	493 aa	Known RBP	4.82	□□□□□ -1.64
MRPL40	YPL173W	SLS1	P42900	643 aa		4.82	□□□□□ -1.64
MRPL40	YPL173W	YDR132C	Q03900	495 aa		4.82	□□□□□ -1.64
MRPL40	YPL173W	MDL2	P33311	773 aa		4.81	□□□□□ -1.64
MRPL40	YPL173W	EXO5	P38289	585 aa		4.81	□□□□□ -1.64
MRPL40	YPL173W	NMD3	P38861	518 aa	Known RBP	4.81	□□□□□ -1.64
MRPL40	YPL173W	QDR1	P40475	563 aa		4.81	□□□□□ -1.64
MRPL40	YPL173W	YNL011C	P53980	444 aa		4.81	□□□□□ -1.64
MRPL40	YPL173W	BSC2	Q05611	235 aa		4.81	□□□□□ -1.64
MRPL40	YPL173W	YPT53	P36019	220 aa		4.8	□□□□□ -1.64
MRPL40	YPL173W	NEM1	P38757	446 aa		4.8	□□□□□ -1.64
MRPL40	YPL173W	YLR257W	Q06146	321 aa	Known RBP	4.8	□□□□□ -1.64
MRPL40	YPL173W	MNL2	Q12205	849 aa		4.8	□□□□□ -1.64
MRPL40	YPL173W	RET1	P22276	1149 aa	Known RBP	4.79	□□□□□ -1.64
MRPL40	YPL173W	MCM5	P29496	775 aa	Known RBP	4.79	□□□□□ -1.64
MRPL40	YPL173W	YAR028W	P39548	234 aa		4.79	□□□□□ -1.64
MRPL40	YPL173W	AIM26	P32858	118 aa		4.78	□□□□□ -1.64
MRPL40	YPL173W	YKL077W	P36081	392 aa		4.78	□□□□□ -1.64
MRPL40	YPL173W	TAT2	P38967	592 aa		4.78	□□□□□ -1.64
MRPL40	YPL173W	SRO9	P25567	434 aa	Known RBP	4.77	□□□□□ -1.65
MRPL40	YPL173W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms