RNA–Protein interactions for RNA: YOR055W

YOR055W, Transcript of Dubious open reading frame, yeast

Gene YOR055W, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR055W	YOR055W	BOI1	P38041	980 aa	Known RBP	2.82	□□□□□ -1.96
YOR055W	YOR055W	RRM3	P38766	723 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	RTS1	P38903	757 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	RRP8	P38961	392 aa	Known RBP	2.82	□□□□□ -1.96
YOR055W	YOR055W	NOC2	P39744	710 aa	Known RBP	2.82	□□□□□ -1.96
YOR055W	YOR055W	PCI8	P40512	444 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	SET4	P42948	560 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	TCB2	P48231	1178 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	WAR1	Q03631	944 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	SAS4	Q04003	481 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	MYO5	Q04439	1219 aa	Known RBP	2.82	□□□□□ -1.96
YOR055W	YOR055W	IRC3	Q06683	689 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	GAS5	Q08193	484 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	TMA16	Q08687	178 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	IOC2	Q12072	812 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	BMT6	Q12291	365 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	2.82	□□□□□ -1.96	not detected
YOR055W	YOR055W	PTC5	Q12511	572 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	YOR111W	Q99210	232 aa		2.82	□□□□□ -1.96
YOR055W	YOR055W	MET6	P05694	767 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	SSA2	P10592	639 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	RGP1	P16664	663 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	MAK31	P23059	88 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	RIT1	P23796	513 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	PRO3	P32263	286 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	MDL2	P33311	773 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	MFT1	P33441	392 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	SIS2	P36024	562 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	MNN4	P36044	1178 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	EBP2	P36049	427 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	PXL1	P36166	706 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	MAL31	P38156	614 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	PFF1	P38244	976 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	RXT2	P38255	430 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	VID27	P40157	782 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	MSH4	P40965	878 aa	Predicted RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	GSM1	P42950	618 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	STU2	P46675	888 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	JJJ2	P46997	583 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	STR2	P47164	639 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	ALD2	P47771	506 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	CUE3	P53137	624 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	ERO1	Q03103	563 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	EIS1	Q05050	843 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	MRD1	Q06106	887 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	CSC1	Q06538	782 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	WRS1	Q12109	432 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	GET3	Q12154	354 aa	Known RBP	2.81	□□□□□ -1.96
YOR055W	YOR055W	RAD61	Q99359	647 aa		2.81	□□□□□ -1.96
YOR055W	YOR055W	FLO1	P32768	1537 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.8	□□□□□ -1.96	not detected
YOR055W	YOR055W	RNR3	P21672	869 aa	Known RBP	2.8	□□□□□ -1.96
YOR055W	YOR055W	MCM3	P24279	971 aa	Known RBP	2.8	□□□□□ -1.96
YOR055W	YOR055W	BMH1	P29311	267 aa	Known RBP	2.8	□□□□□ -1.96
YOR055W	YOR055W	YBL086C	P38177	466 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	LEO1	P38439	464 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	LYS14	P40971	790 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	TFG2	P41896	400 aa	Predicted RBP	2.8	□□□□□ -1.96
YOR055W	YOR055W	PIP2	P52960	996 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	GIS4	Q04233	774 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	YDR341C	Q05506	607 aa	Known RBP	2.8	□□□□□ -1.96
YOR055W	YOR055W	PIB1	Q06651	286 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	AFT2	Q08957	416 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	APL4	Q12028	832 aa		2.8	□□□□□ -1.96
YOR055W	YOR055W	NOP58	Q12499	511 aa	Known RBP	2.8	□□□□□ -1.96
YOR055W	YOR055W	RPL22A	P05749	121 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	PDC1	P06169	563 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	ARG82	P07250	355 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	SRP54	P20424	541 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	ACE2	P21192	770 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	CDC15	P27636	974 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	OXP1	P28273	1286 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	SAC6	P32599	642 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	YKU70	P32807	602 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	YET1	P35723	206 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	SHM1	P37292	490 aa	Predicted RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	PCH2	P38126	564 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	ERT1	P38140	529 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	RTT107	P38850	1070 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	GTT3	P39996	337 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	TPM2	P40414	161 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	ULI1	P43604	169 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	OSW7	P43611	510 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	ALG2	P43636	503 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	APL6	P46682	809 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	YGR237C	P50089	785 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	YGL138C	P53122	345 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	PUS6	P53294	404 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	VPS75	P53853	264 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	FAR11	P53917	953 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	RPT6	Q01939	405 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	HOS3	Q02959	697 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	GDE1	Q02979	1223 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	PRP42	Q03776	544 aa	Known RBP	2.79	□□□□□ -1.96
YOR055W	YOR055W	UBX2	Q04228	584 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	MMR1	Q06324	491 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	ESC2	Q06340	456 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	PSR2	Q07949	397 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	DSE3	Q08729	430 aa		2.79	□□□□□ -1.96
YOR055W	YOR055W	YOR296W	Q08748	1289 aa		2.79	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms