RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C PSE1P32337 1089 aaKnown RBP5.96□□□□□ -1.46
RAT1YOR048C ADE17P38009 592 aaKnown RBP5.96□□□□□ -1.46
RAT1YOR048C GLO3P38682 493 aaKnown RBP5.96□□□□□ -1.46
RAT1YOR048C NDC80P40460 691 aa5.96□□□□□ -1.46
RAT1YOR048C DSN1P40568 576 aa5.96□□□□□ -1.46
RAT1YOR048C PRP42Q03776 544 aaKnown RBP5.96□□□□□ -1.46
RAT1YOR048C KAR5Q04746 504 aa5.96□□□□□ -1.46
RAT1YOR048C GET3Q12154 354 aaKnown RBP5.96□□□□□ -1.46
RAT1YOR048C MRC1P25588 1096 aa5.96□□□□□ -1.46
RAT1YOR048C PCI8P40512 444 aa5.96□□□□□ -1.46
RAT1YOR048C EBS1Q03466 884 aaKnown RBP5.96□□□□□ -1.46
RAT1YOR048C TUF1P02992 437 aaKnown RBP5.95□□□□□ -1.46
RAT1YOR048C DAL7P21826 554 aa5.95□□□□□ -1.46
RAT1YOR048C OPI1P21957 404 aa5.95□□□□□ -1.46
RAT1YOR048C ERG7P38604 731 aa5.95□□□□□ -1.46
RAT1YOR048C SPL2P38839 148 aa5.95□□□□□ -1.46
RAT1YOR048C IRC8P47046 822 aa5.95□□□□□ -1.46
RAT1YOR048C GFD1Q04839 188 aaKnown RBP5.95□□□□□ -1.46
RAT1YOR048C GIN4Q12263 1142 aa5.95□□□□□ -1.46
RAT1YOR048C PGI1P12709 554 aaKnown RBP5.95□□□□□ -1.46
RAT1YOR048C RAD53P22216 821 aa5.95□□□□□ -1.46
RAT1YOR048C CWC22P53333 577 aaKnown RBP5.95□□□□□ -1.46
RAT1YOR048C YCG1Q06680 1035 aa5.95□□□□□ -1.46
RAT1YOR048C PHO13P19881 312 aa5.94□□□□□ -1.46
RAT1YOR048C MGM1P32266 881 aa5.94□□□□□ -1.46
RAT1YOR048C MCD4P36051 919 aa5.94□□□□□ -1.46
RAT1YOR048C SAP190P36123 1033 aa5.94□□□□□ -1.46
RAT1YOR048C BOP3P53958 396 aa5.94□□□□□ -1.46
RAT1YOR048C MTC5Q03897 1148 aa5.94□□□□□ -1.46
RAT1YOR048C MMR1Q06324 491 aa5.94□□□□□ -1.46
RAT1YOR048C SPN1Q06505 410 aaPredicted RBP5.94□□□□□ -1.46
RAT1YOR048C ATG23Q06671 453 aa5.94□□□□□ -1.46
RAT1YOR048C YOR223WQ12015 292 aa5.94□□□□□ -1.46
RAT1YOR048C TAH18Q12181 623 aa5.94□□□□□ -1.46
RAT1YOR048C PDC6P26263 563 aaKnown RBP5.94□□□□□ -1.46
RAT1YOR048C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
RAT1YOR048C CTK3P46963 296 aaPredicted RBP5.94□□□□□ -1.46
RAT1YOR048C NSG2P53898 299 aa5.94□□□□□ -1.46
RAT1YOR048C VPS38Q05919 439 aa5.94□□□□□ -1.46
RAT1YOR048C SPP382Q06411 708 aaPredicted RBP5.94□□□□□ -1.46
RAT1YOR048C UTP10P42945 1769 aaKnown RBP5.94□□□□□ -1.46
RAT1YOR048C RAD1P06777 1100 aa5.93□□□□□ -1.46
RAT1YOR048C TOM70P07213 617 aaKnown RBP5.93□□□□□ -1.46
RAT1YOR048C MTF2P10849 440 aa5.93□□□□□ -1.46
RAT1YOR048C MSH1P25846 959 aa5.93□□□□□ -1.46
RAT1YOR048C YKR075CP36155 307 aa5.93□□□□□ -1.46
RAT1YOR048C MIC19P43594 170 aa5.93□□□□□ -1.46
RAT1YOR048C SMD2Q06217 110 aaKnown RBP5.93□□□□□ -1.46
RAT1YOR048C TOS4Q06266 489 aa5.93□□□□□ -1.46
RAT1YOR048C ALD2P47771 506 aa5.93□□□□□ -1.46
RAT1YOR048C MET6P05694 767 aaKnown RBP5.93□□□□□ -1.46
RAT1YOR048C SSA2P10592 639 aaKnown RBP5.93□□□□□ -1.46
RAT1YOR048C RIT1P23796 513 aa5.93□□□□□ -1.46
RAT1YOR048C YHL050CP38721 697 aa5.93□□□□□ -1.46
RAT1YOR048C TFG2P41896 400 aaPredicted RBP5.93□□□□□ -1.46
RAT1YOR048C GSM1P42950 618 aa5.93□□□□□ -1.46
RAT1YOR048C OXP1P28273 1286 aa5.92□□□□□ -1.46
RAT1YOR048C CRG1P38892 291 aaRIP-Chip data5.92□□□□□ -1.46not detected
RAT1YOR048C TRS120Q04183 1289 aa5.92□□□□□ -1.46
RAT1YOR048C SOV1Q04748 898 aa5.92□□□□□ -1.46
RAT1YOR048C YLR287CQ05881 355 aa5.92□□□□□ -1.46
RAT1YOR048C MRD1Q06106 887 aaKnown RBP5.92□□□□□ -1.46
RAT1YOR048C YPL225WQ08971 146 aaKnown RBP5.92□□□□□ -1.46
RAT1YOR048C PHM7Q12252 991 aa5.92□□□□□ -1.46
RAT1YOR048C JIP3O13555 125 aa5.92□□□□□ -1.46
RAT1YOR048C SUP35P05453 685 aaKnown RBP5.92□□□□□ -1.46
RAT1YOR048C MDL2P33311 773 aa5.92□□□□□ -1.46
RAT1YOR048C PTK1P36002 662 aaPredicted RBP5.92□□□□□ -1.46
RAT1YOR048C KIC1P38692 1080 aa5.92□□□□□ -1.46
RAT1YOR048C SIP3P38717 1229 aa5.92□□□□□ -1.46
RAT1YOR048C CCT4P39078 528 aaKnown RBP5.92□□□□□ -1.46
RAT1YOR048C SHQ1P40486 507 aaPredicted RBP5.92□□□□□ -1.46
RAT1YOR048C TAD1P53065 400 aa5.92□□□□□ -1.46
RAT1YOR048C MRS2Q01926 470 aa5.92□□□□□ -1.46
RAT1YOR048C SPO75Q07798 868 aa5.92□□□□□ -1.46
RAT1YOR048C NYV1Q12255 253 aa5.92□□□□□ -1.46
RAT1YOR048C HIS4P00815 799 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C ANP1P32629 500 aa5.91□□□□□ -1.46
RAT1YOR048C PET10P36139 283 aa5.91□□□□□ -1.46
RAT1YOR048C MIP6P38760 659 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C MVP1P40959 511 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C IES1P43579 692 aa5.91□□□□□ -1.46
RAT1YOR048C HFM1P51979 1187 aa5.91□□□□□ -1.46
RAT1YOR048C RPT4P53549 437 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C ADY4Q05955 493 aa5.91□□□□□ -1.46
RAT1YOR048C RAD57P25301 460 aa5.91□□□□□ -1.46
RAT1YOR048C RFT1P38206 574 aaPredicted RBP5.91□□□□□ -1.46
RAT1YOR048C RPS15Q01855 142 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C ADR1P07248 1323 aa5.91□□□□□ -1.46
RAT1YOR048C RNA1P11745 407 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C XRS2P33301 854 aa5.91□□□□□ -1.46
RAT1YOR048C CTM1P38818 585 aa5.91□□□□□ -1.46
RAT1YOR048C CCC2P38995 1004 aa5.91□□□□□ -1.46
RAT1YOR048C YMR124WP39523 943 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C AIP1P46680 615 aaKnown RBP5.91□□□□□ -1.46
RAT1YOR048C ERG5P54781 538 aa5.91□□□□□ -1.46
RAT1YOR048C SSF2Q12153 453 aaPredicted RBP5.91□□□□□ -1.46
RAT1YOR048C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.9□□□□□ -1.46 RIP-Chip
RAT1YOR048C PET111P08468 800 aa5.9□□□□□ -1.46
RAT1YOR048C RXT2P38255 430 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms