RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE4	YOR035C	GAS5	Q08193	484 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	MAE1	P36013	669 aa	Known RBP	4.57	□□□□□ -1.68
SHE4	YOR035C	YKL077W	P36081	392 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	ICP55	P40051	511 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	PRY1	P47032	299 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	DSE4	P53753	1117 aa		4.57	□□□□□ -1.68
SHE4	YOR035C	PUS1	Q12211	544 aa	Known RBP	4.57	□□□□□ -1.68
SHE4	YOR035C	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	CYC8	P14922	966 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	BUD9	P53226	547 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	FAR11	P53917	953 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	ESF1	Q06344	628 aa	Known RBP	4.56	□□□□□ -1.68
SHE4	YOR035C	PRE9	P23638	258 aa	Known RBP	4.56	□□□□□ -1.68
SHE4	YOR035C	PEX28	P38848	579 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	YIG1	Q08956	461 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	MCD1	Q12158	566 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	YDR215C	Q12240	137 aa		4.56	□□□□□ -1.68
SHE4	YOR035C	ERS1	P17261	260 aa		4.55	□□□□□ -1.68
SHE4	YOR035C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-DR6	P0CX70	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-ER1	P0CX71	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-LR2	P0CX72	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-PL	P0CX73	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-JR1	P0CX74	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-LR3	P0CX75	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-ML2	P0CX76	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	MSH3	P25336	1018 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	SFA1	P32771	386 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TAT1	P38085	619 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	EXO5	P38289	585 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	KIP3	P53086	805 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-GR1	Q12085	440 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	YLL054C	Q12244	843 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-NL1	Q12391	440 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	TY1A-OL	Q92392	440 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	YCK2	P23292	546 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	GCV1	P48015	400 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	MEC3	Q02574	474 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	NOG1	Q02892	647 aa	Known RBP	4.54	□□□□□ -1.68
SHE4	YOR035C	RMD1	Q03441	430 aa		4.54	□□□□□ -1.68
SHE4	YOR035C	AI3	P03877	415 aa		4.53	□□□□□ -1.68
SHE4	YOR035C	RSC6	P25632	483 aa		4.53	□□□□□ -1.68
SHE4	YOR035C	REI1	P38344	393 aa	Predicted RBP	4.53	□□□□□ -1.68
SHE4	YOR035C	PIC2	P40035	300 aa		4.53	□□□□□ -1.68
SHE4	YOR035C	MTR4	P47047	1073 aa	Known RBP	4.53	□□□□□ -1.68
SHE4	YOR035C	SLS1	P42900	643 aa		4.53	□□□□□ -1.68
SHE4	YOR035C	ALG6	Q12001	544 aa	Known RBP	4.52	□□□□□ -1.69
SHE4	YOR035C	YOR223W	Q12015	292 aa		4.52	□□□□□ -1.69
SHE4	YOR035C	NEM1	P38757	446 aa		4.51	□□□□□ -1.69
SHE4	YOR035C	XKS1	P42826	600 aa		4.51	□□□□□ -1.69
SHE4	YOR035C	YGL140C	P53120	1219 aa		4.51	□□□□□ -1.69
SHE4	YOR035C	NOP7	P53261	605 aa	Known RBP	4.51	□□□□□ -1.69
SHE4	YOR035C	ATG14	P38270	344 aa		4.51	□□□□□ -1.69
SHE4	YOR035C	DOT1	Q04089	582 aa	Known RBP	4.51	□□□□□ -1.69
SHE4	YOR035C	JIP5	Q06214	492 aa	Predicted RBP	4.51	□□□□□ -1.69
SHE4	YOR035C	ARL1	P38116	183 aa	Known RBP	4.5	□□□□□ -1.69
SHE4	YOR035C	AVO1	Q08236	1176 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	SEC23	P15303	768 aa	Known RBP	4.5	□□□□□ -1.69
SHE4	YOR035C	PET112	P33893	541 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	SKN7	P38889	622 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	ARI1	P53111	347 aa	Known RBP	4.5	□□□□□ -1.69
SHE4	YOR035C	SVF1	Q05515	481 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	MRL1	Q06815	381 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	MCA1	Q08601	432 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	REC8	Q12188	680 aa		4.5	□□□□□ -1.69
SHE4	YOR035C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
SHE4	YOR035C	PAM1	P37304	830 aa	Known RBP	4.49	□□□□□ -1.69
SHE4	YOR035C	NCE103	P53615	221 aa		4.49	□□□□□ -1.69
SHE4	YOR035C	UTP5	Q04177	643 aa	Known RBP	4.49	□□□□□ -1.69
SHE4	YOR035C	DED1	P06634	604 aa	Known RBP	4.49	□□□□□ -1.69
SHE4	YOR035C	VMA4	P22203	233 aa	Known RBP	4.49	□□□□□ -1.69
SHE4	YOR035C	AKR1	P39010	764 aa		4.49	□□□□□ -1.69
SHE4	YOR035C	NAP1	P25293	417 aa	Known RBP	4.48	□□□□□ -1.69
SHE4	YOR035C	COQ2	P32378	372 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	SPO74	P45819	413 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	ELA1	P53861	379 aa	Predicted RBP	4.48	□□□□□ -1.69
SHE4	YOR035C	GPT2	P36148	743 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	MAD1	P40957	749 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	YGR045C	P53229	120 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	YNR063W	P53749	607 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	EST2	Q06163	884 aa		4.48	□□□□□ -1.69
SHE4	YOR035C	GCR1	P07261	785 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	TAF13	P11747	167 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	YAR028W	P39548	234 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	MET10	P39692	1035 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	YPL034W	Q03083	165 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	HEM13	P11353	328 aa	Known RBP	4.47	□□□□□ -1.69
SHE4	YOR035C	RDH54	P38086	958 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	HDA2	Q06629	674 aa		4.47	□□□□□ -1.69
SHE4	YOR035C	CLN2	P20438	545 aa		4.46	□□□□□ -1.7
SHE4	YOR035C	RAD27	P26793	382 aa		4.46	□□□□□ -1.7
SHE4	YOR035C	NAM7	P30771	971 aa	Known RBP	4.46	□□□□□ -1.7
SHE4	YOR035C	MNR2	P35724	969 aa		4.46	□□□□□ -1.7
SHE4	YOR035C	ADD66	P36040	267 aa		4.46	□□□□□ -1.7
SHE4	YOR035C	LSB3	P43603	459 aa	Known RBP	4.46	□□□□□ -1.7
SHE4	YOR035C	CCT8	P47079	568 aa	Known RBP	4.46	□□□□□ -1.7
SHE4	YOR035C	GIC2	Q06648	383 aa		4.46	□□□□□ -1.7
SHE4	YOR035C	HSE1	P38753	452 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 88.2 ms