RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C URN1Q06525 465 aaKnown RBP4.55□□□□□ -1.68
HRD1YOL013C MSC6Q08818 692 aaKnown RBP4.55□□□□□ -1.68
HRD1YOL013C CHS2P14180 963 aa4.54□□□□□ -1.68
HRD1YOL013C PPX1P38698 397 aa4.54□□□□□ -1.68
HRD1YOL013C AKR1P39010 764 aa4.54□□□□□ -1.68
HRD1YOL013C GCV1P48015 400 aa4.54□□□□□ -1.68
HRD1YOL013C YIG1Q08956 461 aa4.54□□□□□ -1.68
HRD1YOL013C YOR223WQ12015 292 aa4.54□□□□□ -1.68
HRD1YOL013C NAM7P30771 971 aaKnown RBP4.54□□□□□ -1.68
HRD1YOL013C GCD6P32501 712 aaKnown RBP4.54□□□□□ -1.68
HRD1YOL013C YAF9P53930 226 aa4.54□□□□□ -1.68
HRD1YOL013C YCS4Q06156 1176 aa4.54□□□□□ -1.68
HRD1YOL013C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
HRD1YOL013C YLR122CQ12312 125 aa4.54□□□□□ -1.68
HRD1YOL013C SEC20P28791 383 aa4.53□□□□□ -1.68
HRD1YOL013C MCM5P29496 775 aaKnown RBP4.53□□□□□ -1.68
HRD1YOL013C VPS35P34110 944 aa4.53□□□□□ -1.68
HRD1YOL013C UTP22P53254 1237 aaPredicted RBP4.53□□□□□ -1.68
HRD1YOL013C ALO1P54783 526 aaKnown RBP4.53□□□□□ -1.68
HRD1YOL013C MEC3Q02574 474 aa4.53□□□□□ -1.68
HRD1YOL013C MED7Q08278 222 aa4.53□□□□□ -1.68
HRD1YOL013C WHI5Q12416 295 aa4.53□□□□□ -1.68
HRD1YOL013C ASF1P32447 279 aa4.52□□□□□ -1.69
HRD1YOL013C MAC1P35192 417 aa4.52□□□□□ -1.69
HRD1YOL013C YJR008WP47085 338 aa4.52□□□□□ -1.69
HRD1YOL013C POL32P47110 350 aa4.52□□□□□ -1.69
HRD1YOL013C NRD1P53617 575 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
HRD1YOL013C GIC2Q06648 383 aa4.52□□□□□ -1.69
HRD1YOL013C OMA1P36163 345 aa4.51□□□□□ -1.69
HRD1YOL013C SHU2P38957 223 aa4.51□□□□□ -1.69
HRD1YOL013C THI12P42883 340 aa4.51□□□□□ -1.69
HRD1YOL013C THI5P43534 340 aa4.51□□□□□ -1.69
HRD1YOL013C THI11P47183 340 aa4.51□□□□□ -1.69
HRD1YOL013C MON1P53129 644 aa4.51□□□□□ -1.69
HRD1YOL013C THI13Q07748 340 aa4.51□□□□□ -1.69
HRD1YOL013C PHO4P07270 312 aaKnown RBP4.51□□□□□ -1.69
HRD1YOL013C MSB1P21339 1137 aaKnown RBP4.51□□□□□ -1.69
HRD1YOL013C YKL077WP36081 392 aa4.51□□□□□ -1.69
HRD1YOL013C NNF1P47149 201 aa4.51□□□□□ -1.69
HRD1YOL013C OYE2Q03558 400 aaKnown RBP4.51□□□□□ -1.69
HRD1YOL013C DOT1Q04089 582 aaKnown RBP4.51□□□□□ -1.69
HRD1YOL013C MAG2Q06436 670 aaKnown RBP4.51□□□□□ -1.69
HRD1YOL013C MET4P32389 672 aa4.5□□□□□ -1.69
HRD1YOL013C ARL1P38116 183 aaKnown RBP4.5□□□□□ -1.69
HRD1YOL013C REI1P38344 393 aaPredicted RBP4.5□□□□□ -1.69
HRD1YOL013C NUG1P40010 520 aaKnown RBP4.5□□□□□ -1.69
HRD1YOL013C INP52P50942 1183 aa4.5□□□□□ -1.69
HRD1YOL013C YGR130CP53278 816 aa4.5□□□□□ -1.69
HRD1YOL013C RNH70P53331 553 aa4.5□□□□□ -1.69
HRD1YOL013C FPR4Q06205 392 aaPredicted RBP4.5□□□□□ -1.69
HRD1YOL013C OXR1Q08952 273 aa4.5□□□□□ -1.69
HRD1YOL013C TRP3P00937 484 aa4.49□□□□□ -1.69
HRD1YOL013C KAR2P16474 682 aaKnown RBP4.49□□□□□ -1.69
HRD1YOL013C SEC8P32855 1065 aa4.49□□□□□ -1.69
HRD1YOL013C SWE1P32944 819 aa4.49□□□□□ -1.69
HRD1YOL013C GPT2P36148 743 aa4.49□□□□□ -1.69
HRD1YOL013C SPO74P45819 413 aa4.49□□□□□ -1.69
HRD1YOL013C RTS3P53289 263 aa4.49□□□□□ -1.69
HRD1YOL013C JIP5Q06214 492 aaPredicted RBP4.49□□□□□ -1.69
HRD1YOL013C NMD2P38798 1089 aaKnown RBP4.48□□□□□ -1.69
HRD1YOL013C PRP40P33203 583 aaKnown RBP4.48□□□□□ -1.69
HRD1YOL013C YKR073CP36153 106 aa4.48□□□□□ -1.69
HRD1YOL013C MMM1P41800 426 aa4.48□□□□□ -1.69
HRD1YOL013C DAK2P43550 591 aa4.48□□□□□ -1.69
HRD1YOL013C CYC7P00045 113 aa4.47□□□□□ -1.69
HRD1YOL013C TOS1P38288 455 aa4.47□□□□□ -1.69
HRD1YOL013C NOG1Q02892 647 aaKnown RBP4.47□□□□□ -1.69
HRD1YOL013C DAL4Q04895 635 aa4.47□□□□□ -1.69
HRD1YOL013C AVO1Q08236 1176 aa4.47□□□□□ -1.69
HRD1YOL013C ALG6Q12001 544 aaKnown RBP4.47□□□□□ -1.69
HRD1YOL013C YOL098CQ12496 1037 aa4.47□□□□□ -1.69
HRD1YOL013C EXO5P38289 585 aa4.46□□□□□ -1.7
HRD1YOL013C CIT3P43635 486 aa4.46□□□□□ -1.7
HRD1YOL013C YOR059CQ08448 450 aaKnown RBP4.46□□□□□ -1.7
HRD1YOL013C NSI1Q12457 570 aa4.46□□□□□ -1.7
HRD1YOL013C TY1A-LR4P0C2I8 440 aaKnown RBP4.45□□□□□ -1.7
HRD1YOL013C TY1A-DR6P0CX70 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-ER1P0CX71 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-LR2P0CX72 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-PLP0CX73 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-JR1P0CX74 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-LR3P0CX75 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-ML2P0CX76 440 aa4.45□□□□□ -1.7
HRD1YOL013C PUB1P32588 453 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7 RIP-Chip
HRD1YOL013C LIP5P32875 414 aa4.45□□□□□ -1.7
HRD1YOL013C RSM26P47141 266 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-GR1Q12085 440 aa4.45□□□□□ -1.7
HRD1YOL013C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.45□□□□□ -1.7
HRD1YOL013C TY1A-OLQ92392 440 aaKnown RBP4.45□□□□□ -1.7
HRD1YOL013C SQT1P35184 431 aa4.45□□□□□ -1.7
HRD1YOL013C VAC8P39968 578 aa4.45□□□□□ -1.7
HRD1YOL013C MTR4P47047 1073 aaKnown RBP4.45□□□□□ -1.7
HRD1YOL013C YGR045CP53229 120 aa4.45□□□□□ -1.7
HRD1YOL013C ULP1Q02724 621 aa4.45□□□□□ -1.7
HRD1YOL013C UBX5Q06682 500 aa4.45□□□□□ -1.7
HRD1YOL013C RPS4AP0CX35 261 aaKnown RBP4.44□□□□□ -1.7
HRD1YOL013C RPS4BP0CX36 261 aaKnown RBP4.44□□□□□ -1.7
HRD1YOL013C MSH3P25336 1018 aa4.44□□□□□ -1.7
HRD1YOL013C RPT1P33299 467 aaKnown RBP4.44□□□□□ -1.7
HRD1YOL013C WHI3P34761 661 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms