RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	YKR018C	P36114	725 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	ETP1	P38748	585 aa	Known RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	LIN1	P38852	340 aa	Predicted RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	SWD1	P39706	426 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	YNL058C	P53947	316 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	SMD2	Q06217	110 aa	Known RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	NOP12	Q08208	459 aa	Known RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	SDH5	Q08230	162 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	HIS3	P06633	220 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	TAL1	P15019	335 aa	Known RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	RIB7	P33312	244 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	HCS1	P34243	683 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	MRP8	P35719	219 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	APD1	P38281	316 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	SIP3	P38717	1229 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	GCD14	P46959	383 aa	Predicted RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	RBL2	P48606	106 aa	Known RBP	7.78	□□□□□ -1.16
MSB3	YNL293W	YGL242C	P53066	181 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	NNT1	Q05874	261 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	STE23	Q06010	1027 aa		7.78	□□□□□ -1.16
MSB3	YNL293W	TYR1	P20049	452 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	STE11	P23561	717 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	MUD2	P36084	527 aa	Known RBP	7.77	□□□□□ -1.17
MSB3	YNL293W	YSW1	P38280	609 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	PIH1	P38768	344 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	ARB1	P40024	610 aa	Known RBP	7.77	□□□□□ -1.17
MSB3	YNL293W	UTP18	P40362	594 aa	Predicted RBP	7.77	□□□□□ -1.17
MSB3	YNL293W	SGM1	P47166	707 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	RTC4	P53850	401 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	ESBP6	P53918	673 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	CWC15	Q03772	175 aa	Known RBP	7.77	□□□□□ -1.17
MSB3	YNL293W	POB3	Q04636	552 aa	Known RBP	7.77	□□□□□ -1.17
MSB3	YNL293W	YOL098C	Q12496	1037 aa		7.77	□□□□□ -1.17
MSB3	YNL293W	ARO1	P08566	1588 aa	Known RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	BIK1	P11709	440 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.76	□□□□□ -1.17	RIP-Chip
MSB3	YNL293W	OPI1	P21957	404 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	KCC4	P25389	1037 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	NPL6	P32832	435 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	YBR242W	P38331	238 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	FTR1	P40088	404 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	YIL001W	P40560	513 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	ALG2	P43636	503 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	SFB2	P53953	876 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.76	□□□□□ -1.17	not detected
MSB3	YNL293W	LSO2	Q3E772	92 aa	Known RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	SNQ2	P32568	1501 aa	Known RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	DPS1	P04802	557 aa	Known RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	RPC34	P32910	317 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	SEG2	P34250	1132 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	MRPL40	P36534	297 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	AMN1	P38285	549 aa	Predicted RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	RTS1	P38903	757 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	YTA6	P40328	754 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	YIL092W	P40497	633 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	LAM5	P43560	674 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	CTH1	P47976	325 aa		7.76	□□□□□ -1.17
MSB3	YNL293W	NCS2	P53923	493 aa	Predicted RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	RKM1	Q08961	583 aa	Predicted RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	HTZ1	Q12692	134 aa	Known RBP	7.76	□□□□□ -1.17
MSB3	YNL293W	MAK16	P10962	306 aa	Predicted RBP	7.75	□□□□□ -1.17
MSB3	YNL293W	DAL7	P21826	554 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	BLI1	P35727	113 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	7.75	□□□□□ -1.17	not detected
MSB3	YNL293W	FAF1	P40546	346 aa	Predicted RBP	7.75	□□□□□ -1.17
MSB3	YNL293W	JJJ2	P46997	583 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	YGR266W	P53326	701 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	DCP2	P53550	970 aa	Known RBP	7.75	□□□□□ -1.17
MSB3	YNL293W	RBA50	Q04418	439 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	SFH1	Q06168	426 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	YOR296W	Q08748	1289 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	HIR3	P47171	1648 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	GDB1	Q06625	1536 aa		7.75	□□□□□ -1.17
MSB3	YNL293W	PSK1	P31374	1356 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	ADE3	P07245	946 aa	Known RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	RAD5	P32849	1169 aa	Predicted RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	NPL4	P33755	580 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	TTI1	P36097	1038 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	YHR218W	P38899	603 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	YHB1	P39676	399 aa	Known RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	VID27	P40157	782 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	GCD10	P41814	478 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	IML2	P47031	731 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	ATG2	P53855	1592 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	VAS1	P07806	1104 aa	Known RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	HEM1	P09950	548 aa	Predicted RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	ATO2	P32907	282 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	BUD2	P33314	1104 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	MUM2	P38236	366 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	YEL023C	P39992	682 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	PHB1	P40961	287 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	YKR005C	Q02203	525 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	ULP1	Q02724	621 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	RAT1	Q02792	1006 aa	Known RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	ECM11	Q04110	302 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	YLH47	Q06493	454 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	GPR1	Q12361	961 aa		7.74	□□□□□ -1.17
MSB3	YNL293W	NOT5	Q12514	560 aa	Predicted RBP	7.74	□□□□□ -1.17
MSB3	YNL293W	YRF1-4	O13559	1382 aa		7.73	□□□□□ -1.17
MSB3	YNL293W	PDR15	Q04182	1529 aa	Known RBP	7.73	□□□□□ -1.17

Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms