RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W RVS167P39743 482 aaKnown RBP7.1□□□□□ -1.27
SSU72YNL222W TOS4Q06266 489 aa7.1□□□□□ -1.27
SSU72YNL222W UGA4P32837 571 aa7.09□□□□□ -1.27
SSU72YNL222W PRP40P33203 583 aaKnown RBP7.09□□□□□ -1.27
SSU72YNL222W RPT1P33299 467 aaKnown RBP7.08□□□□□ -1.28
SSU72YNL222W GCV1P48015 400 aa7.08□□□□□ -1.28
SSU72YNL222W UTP22P53254 1237 aaPredicted RBP7.08□□□□□ -1.28
SSU72YNL222W DAL4Q04895 635 aa7.08□□□□□ -1.28
SSU72YNL222W TY1A-LR4P0C2I8 440 aaKnown RBP7.07□□□□□ -1.28
SSU72YNL222W TY1A-DR6P0CX70 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-ER1P0CX71 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-LR2P0CX72 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-PLP0CX73 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-JR1P0CX74 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-LR3P0CX75 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-ML2P0CX76 440 aa7.07□□□□□ -1.28
SSU72YNL222W MAC1P35192 417 aa7.07□□□□□ -1.28
SSU72YNL222W YOR223WQ12015 292 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-GR1Q12085 440 aa7.07□□□□□ -1.28
SSU72YNL222W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.07□□□□□ -1.28
SSU72YNL222W TY1A-OLQ92392 440 aaKnown RBP7.07□□□□□ -1.28
SSU72YNL222W SAF1P38352 637 aa7.06□□□□□ -1.28
SSU72YNL222W ALO1P54783 526 aaKnown RBP7.06□□□□□ -1.28
SSU72YNL222W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.06□□□□□ -1.28not detected
SSU72YNL222W OXR1Q08952 273 aa7.06□□□□□ -1.28
SSU72YNL222W YLR122CQ12312 125 aa7.06□□□□□ -1.28
SSU72YNL222W MEC3Q02574 474 aa7.05□□□□□ -1.28
SSU72YNL222W ALG6Q12001 544 aaKnown RBP7.05□□□□□ -1.28
SSU72YNL222W REI1P38344 393 aaPredicted RBP7.04□□□□□ -1.28
SSU72YNL222W FAA3P39002 694 aa7.04□□□□□ -1.28
SSU72YNL222W DOT1Q04089 582 aaKnown RBP7.04□□□□□ -1.28
SSU72YNL222W YLL054CQ12244 843 aa7.04□□□□□ -1.28
SSU72YNL222W KAE1P36132 386 aa7.03□□□□□ -1.28
SSU72YNL222W GPT2P36148 743 aa7.03□□□□□ -1.28
SSU72YNL222W EXO5P38289 585 aa7.03□□□□□ -1.28
SSU72YNL222W POL32P47110 350 aa7.03□□□□□ -1.28
SSU72YNL222W ULP1Q02724 621 aa7.03□□□□□ -1.28
SSU72YNL222W KAR2P16474 682 aaKnown RBP7.02□□□□□ -1.29
SSU72YNL222W YKL077WP36081 392 aa7.02□□□□□ -1.29
SSU72YNL222W OMA1P36163 345 aa7.02□□□□□ -1.29
SSU72YNL222W RSM26P47141 266 aa7.02□□□□□ -1.29
SSU72YNL222W PEX13P80667 386 aa7.02□□□□□ -1.29
SSU72YNL222W CHS2P14180 963 aa7.01□□□□□ -1.29
SSU72YNL222W ATE1P16639 503 aa7.01□□□□□ -1.29
SSU72YNL222W SHU2P38957 223 aa7.01□□□□□ -1.29
SSU72YNL222W GIC2Q06648 383 aa7.01□□□□□ -1.29
SSU72YNL222W MSH3P25336 1018 aa7□□□□□ -1.29
SSU72YNL222W SQT1P35184 431 aa7□□□□□ -1.29
SSU72YNL222W NEM1P38757 446 aa7□□□□□ -1.29
SSU72YNL222W SLS1P42900 643 aa7□□□□□ -1.29
SSU72YNL222W YGR130CP53278 816 aa7□□□□□ -1.29
SSU72YNL222W NOG1Q02892 647 aaKnown RBP7□□□□□ -1.29
SSU72YNL222W TRP3P00937 484 aa6.99□□□□□ -1.29
SSU72YNL222W HXK1P04806 485 aaKnown RBP6.99□□□□□ -1.29
SSU72YNL222W YKR073CP36153 106 aa6.98□□□□□ -1.29
SSU72YNL222W INP52P50942 1183 aa6.98□□□□□ -1.29
SSU72YNL222W YPL109CQ02981 657 aa6.98□□□□□ -1.29
SSU72YNL222W HEM3P28789 327 aa6.97□□□□□ -1.29
SSU72YNL222W MGE1P38523 228 aa6.97□□□□□ -1.29
SSU72YNL222W PEX28P38848 579 aa6.97□□□□□ -1.29
SSU72YNL222W YGR045CP53229 120 aa6.97□□□□□ -1.29
SSU72YNL222W ELA1P53861 379 aaPredicted RBP6.97□□□□□ -1.29
SSU72YNL222W RRP15Q06511 250 aaPredicted RBP6.97□□□□□ -1.29
SSU72YNL222W MED7Q08278 222 aa6.97□□□□□ -1.29
SSU72YNL222W MCM2P29469 868 aa6.96□□□□□ -1.3
SSU72YNL222W ARL1P38116 183 aaKnown RBP6.96□□□□□ -1.3
SSU72YNL222W MSH4P40965 878 aaPredicted RBP6.96□□□□□ -1.3
SSU72YNL222W SPO74P45819 413 aa6.96□□□□□ -1.3
SSU72YNL222W MTR4P47047 1073 aaKnown RBP6.96□□□□□ -1.3
SSU72YNL222W ADI1Q03677 179 aa6.96□□□□□ -1.3
SSU72YNL222W AVO1Q08236 1176 aa6.96□□□□□ -1.3
SSU72YNL222W WHI3P34761 661 aaKnown RBP6.95□□□□□ -1.3
SSU72YNL222W TOS1P38288 455 aa6.95□□□□□ -1.3
SSU72YNL222W YGR122WP53272 402 aa6.95□□□□□ -1.3
SSU72YNL222W RPS26AP39938 119 aaKnown RBP6.94□□□□□ -1.3
SSU72YNL222W RPS26BP39939 119 aaKnown RBP6.94□□□□□ -1.3
SSU72YNL222W PIC2P40035 300 aa6.94□□□□□ -1.3
SSU72YNL222W FYV10P40492 516 aa6.94□□□□□ -1.3
SSU72YNL222W MMM1P41800 426 aa6.94□□□□□ -1.3
SSU72YNL222W UTP5Q04177 643 aaKnown RBP6.94□□□□□ -1.3
SSU72YNL222W CYC7P00045 113 aa6.93□□□□□ -1.3
SSU72YNL222W MSB1P21339 1137 aaKnown RBP6.93□□□□□ -1.3
SSU72YNL222W XKS1P42826 600 aa6.93□□□□□ -1.3
SSU72YNL222W YJR107WP47145 328 aa6.93□□□□□ -1.3
SSU72YNL222W RPS4AP0CX35 261 aaKnown RBP6.92□□□□□ -1.3
SSU72YNL222W RPS4BP0CX36 261 aaKnown RBP6.92□□□□□ -1.3
SSU72YNL222W YGL140CP53120 1219 aa6.92□□□□□ -1.3
SSU72YNL222W EAR1Q03212 550 aa6.92□□□□□ -1.3
SSU72YNL222W SPR28Q04921 423 aa6.92□□□□□ -1.3
SSU72YNL222W RAD2P07276 1031 aa6.91□□□□□ -1.3
SSU72YNL222W HEM13P11353 328 aaKnown RBP6.91□□□□□ -1.3
SSU72YNL222W CYC8P14922 966 aa6.91□□□□□ -1.3
SSU72YNL222W VMA4P22203 233 aaKnown RBP6.91□□□□□ -1.3
SSU72YNL222W YAR028WP39548 234 aa6.91□□□□□ -1.3
SSU72YNL222W CIT3P43635 486 aa6.91□□□□□ -1.3
SSU72YNL222W ALT1P52893 592 aa6.91□□□□□ -1.3
SSU72YNL222W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
SSU72YNL222W PRE9P23638 258 aaKnown RBP6.9□□□□□ -1.3
SSU72YNL222W NFS1P25374 497 aa6.9□□□□□ -1.3
SSU72YNL222W SMY2P32909 740 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms