RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	GLT1	Q12680	2145 aa	Known RBP	5.02	□□□□□ -1.61
SWS2	YNL081C	PHO4	P07270	312 aa	Known RBP	5.01	□□□□□ -1.61
SWS2	YNL081C	ARL1	P38116	183 aa	Known RBP	5.01	□□□□□ -1.61
SWS2	YNL081C	MON1	P53129	644 aa		5.01	□□□□□ -1.61
SWS2	YNL081C	GIC2	Q06648	383 aa		5.01	□□□□□ -1.61
SWS2	YNL081C	NAM7	P30771	971 aa	Known RBP	5	□□□□□ -1.61
SWS2	YNL081C	AKR1	P39010	764 aa		5	□□□□□ -1.61
SWS2	YNL081C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	RIP-Chip
SWS2	YNL081C	MED7	Q08278	222 aa		5	□□□□□ -1.61
SWS2	YNL081C	MSB1	P21339	1137 aa	Known RBP	4.99	□□□□□ -1.61
SWS2	YNL081C	MET4	P32389	672 aa		4.99	□□□□□ -1.61
SWS2	YNL081C	REI1	P38344	393 aa	Predicted RBP	4.99	□□□□□ -1.61
SWS2	YNL081C	YLR122C	Q12312	125 aa		4.99	□□□□□ -1.61
SWS2	YNL081C	MAC1	P35192	417 aa		4.98	□□□□□ -1.61
SWS2	YNL081C	IPL1	P38991	367 aa		4.98	□□□□□ -1.61
SWS2	YNL081C	ALO1	P54783	526 aa	Known RBP	4.98	□□□□□ -1.61
SWS2	YNL081C	DOT1	Q04089	582 aa	Known RBP	4.98	□□□□□ -1.61
SWS2	YNL081C	PRP40	P33203	583 aa	Known RBP	4.97	□□□□□ -1.61
SWS2	YNL081C	OMA1	P36163	345 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	DAK2	P43550	591 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	SPO74	P45819	413 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	SEN54	Q02825	467 aa	Predicted RBP	4.97	□□□□□ -1.61
SWS2	YNL081C	YML020W	Q03722	664 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	DAL4	Q04895	635 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	AVO1	Q08236	1176 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	NSI1	Q12457	570 aa		4.97	□□□□□ -1.61
SWS2	YNL081C	HEM3	P28789	327 aa		4.96	□□□□□ -1.62
SWS2	YNL081C	GPT2	P36148	743 aa		4.96	□□□□□ -1.62
SWS2	YNL081C	MTR4	P47047	1073 aa	Known RBP	4.96	□□□□□ -1.62
SWS2	YNL081C	YGR130C	P53278	816 aa		4.96	□□□□□ -1.62
SWS2	YNL081C	NOG1	Q02892	647 aa	Known RBP	4.96	□□□□□ -1.62
SWS2	YNL081C	YOR059C	Q08448	450 aa	Known RBP	4.96	□□□□□ -1.62
SWS2	YNL081C	WHI5	Q12416	295 aa		4.96	□□□□□ -1.62
SWS2	YNL081C	SQT1	P35184	431 aa		4.95	□□□□□ -1.62
SWS2	YNL081C	ATG14	P38270	344 aa		4.95	□□□□□ -1.62
SWS2	YNL081C	MGE1	P38523	228 aa		4.95	□□□□□ -1.62
SWS2	YNL081C	MMM1	P41800	426 aa		4.95	□□□□□ -1.62
SWS2	YNL081C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	RIP-Chip
SWS2	YNL081C	TRP3	P00937	484 aa		4.94	□□□□□ -1.62
SWS2	YNL081C	RPT1	P33299	467 aa	Known RBP	4.94	□□□□□ -1.62
SWS2	YNL081C	EXO5	P38289	585 aa		4.94	□□□□□ -1.62
SWS2	YNL081C	RSM26	P47141	266 aa		4.94	□□□□□ -1.62
SWS2	YNL081C	PEX13	P80667	386 aa		4.94	□□□□□ -1.62
SWS2	YNL081C	ULP1	Q02724	621 aa		4.94	□□□□□ -1.62
SWS2	YNL081C	ALG6	Q12001	544 aa	Known RBP	4.94	□□□□□ -1.62
SWS2	YNL081C	CYC7	P00045	113 aa		4.93	□□□□□ -1.62
SWS2	YNL081C	MSH3	P25336	1018 aa		4.93	□□□□□ -1.62
SWS2	YNL081C	NNK1	P36003	928 aa		4.93	□□□□□ -1.62
SWS2	YNL081C	CIT3	P43635	486 aa		4.93	□□□□□ -1.62
SWS2	YNL081C	INP52	P50942	1183 aa		4.93	□□□□□ -1.62
SWS2	YNL081C	ADI1	Q03677	179 aa		4.93	□□□□□ -1.62
SWS2	YNL081C	NOP8	Q08287	484 aa	Predicted RBP	4.93	□□□□□ -1.62
SWS2	YNL081C	RPS4A	P0CX35	261 aa	Known RBP	4.92	□□□□□ -1.62
SWS2	YNL081C	RPS4B	P0CX36	261 aa	Known RBP	4.92	□□□□□ -1.62
SWS2	YNL081C	VMA4	P22203	233 aa	Known RBP	4.92	□□□□□ -1.62
SWS2	YNL081C	TOS1	P38288	455 aa		4.92	□□□□□ -1.62
SWS2	YNL081C	HSE1	P38753	452 aa		4.92	□□□□□ -1.62
SWS2	YNL081C	SLS1	P42900	643 aa		4.92	□□□□□ -1.62
SWS2	YNL081C	YGR045C	P53229	120 aa		4.92	□□□□□ -1.62
SWS2	YNL081C	LAP2	Q10740	671 aa		4.92	□□□□□ -1.62
SWS2	YNL081C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-DR6	P0CX70	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-ER1	P0CX71	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-LR2	P0CX72	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-PL	P0CX73	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-JR1	P0CX74	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-LR3	P0CX75	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-ML2	P0CX76	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	NFS1	P25374	497 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SWS2	YNL081C	LIP5	P32875	414 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	YKR073C	P36153	106 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	PEX28	P38848	579 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	MSH4	P40965	878 aa	Predicted RBP	4.91	□□□□□ -1.62
SWS2	YNL081C	MRPS18	P42847	217 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	POL32	P47110	350 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	ELA1	P53861	379 aa	Predicted RBP	4.91	□□□□□ -1.62
SWS2	YNL081C	RCM1	P53972	490 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-GR1	Q12085	440 aa		4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.91	□□□□□ -1.62
SWS2	YNL081C	TY1A-OL	Q92392	440 aa	Known RBP	4.91	□□□□□ -1.62
SWS2	YNL081C	ASF1	P32447	279 aa		4.9	□□□□□ -1.63
SWS2	YNL081C	SMY2	P32909	740 aa	Known RBP	4.9	□□□□□ -1.63
SWS2	YNL081C	WHI3	P34761	661 aa	Known RBP	4.9	□□□□□ -1.63
SWS2	YNL081C	YAR028W	P39548	234 aa		4.9	□□□□□ -1.63
SWS2	YNL081C	YGR122W	P53272	402 aa		4.9	□□□□□ -1.63
SWS2	YNL081C	YPL109C	Q02981	657 aa		4.9	□□□□□ -1.63
SWS2	YNL081C	MCD1	Q12158	566 aa		4.9	□□□□□ -1.63
SWS2	YNL081C	HXK1	P04806	485 aa	Known RBP	4.89	□□□□□ -1.63
SWS2	YNL081C	PRE9	P23638	258 aa	Known RBP	4.89	□□□□□ -1.63
SWS2	YNL081C	UGA4	P32837	571 aa		4.89	□□□□□ -1.63
SWS2	YNL081C	NEM1	P38757	446 aa		4.89	□□□□□ -1.63
SWS2	YNL081C	ALT1	P52893	592 aa		4.89	□□□□□ -1.63
SWS2	YNL081C	UTP5	Q04177	643 aa	Known RBP	4.89	□□□□□ -1.63
SWS2	YNL081C	BRE4	Q07660	1125 aa		4.89	□□□□□ -1.63
SWS2	YNL081C	TAF13	P11747	167 aa		4.88	□□□□□ -1.63
SWS2	YNL081C	XKS1	P42826	600 aa		4.88	□□□□□ -1.63
SWS2	YNL081C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SWS2	YNL081C	RET1	P22276	1149 aa	Known RBP	4.87	□□□□□ -1.63
SWS2	YNL081C	ADD66	P36040	267 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms