RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeastyeast

Gene PKR1, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PKR1YMR123W ARL1P38116 183 aaKnown RBP4.42□□□□□ -1.7
PKR1YMR123W AKR1P39010 764 aa4.42□□□□□ -1.7
PKR1YMR123W THI12P42883 340 aa4.42□□□□□ -1.7
PKR1YMR123W THI5P43534 340 aa4.42□□□□□ -1.7
PKR1YMR123W THI11P47183 340 aa4.42□□□□□ -1.7
PKR1YMR123W MEC3Q02574 474 aa4.42□□□□□ -1.7
PKR1YMR123W THI13Q07748 340 aa4.42□□□□□ -1.7
PKR1YMR123W PUF3Q07807 879 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
PKR1YMR123W NAM7P30771 971 aaKnown RBP4.41□□□□□ -1.7
PKR1YMR123W PRP40P33203 583 aaKnown RBP4.41□□□□□ -1.7
PKR1YMR123W SHU2P38957 223 aa4.41□□□□□ -1.7
PKR1YMR123W DAK2P43550 591 aa4.41□□□□□ -1.7
PKR1YMR123W TY1A-LR4P0C2I8 440 aaKnown RBP4.4□□□□□ -1.71
PKR1YMR123W TY1A-DR6P0CX70 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-ER1P0CX71 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-LR2P0CX72 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-PLP0CX73 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-JR1P0CX74 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-LR3P0CX75 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-ML2P0CX76 440 aa4.4□□□□□ -1.71
PKR1YMR123W KAR2P16474 682 aaKnown RBP4.4□□□□□ -1.71
PKR1YMR123W NOG1Q02892 647 aaKnown RBP4.4□□□□□ -1.71
PKR1YMR123W DOT1Q04089 582 aaKnown RBP4.4□□□□□ -1.71
PKR1YMR123W GIC2Q06648 383 aa4.4□□□□□ -1.71
PKR1YMR123W OXR1Q08952 273 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-GR1Q12085 440 aa4.4□□□□□ -1.71
PKR1YMR123W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.4□□□□□ -1.71
PKR1YMR123W TY1A-OLQ92392 440 aaKnown RBP4.4□□□□□ -1.71
PKR1YMR123W CHS2P14180 963 aa4.39□□□□□ -1.71
PKR1YMR123W YKL077WP36081 392 aa4.39□□□□□ -1.71
PKR1YMR123W EXO5P38289 585 aa4.39□□□□□ -1.71
PKR1YMR123W REI1P38344 393 aaPredicted RBP4.39□□□□□ -1.71
PKR1YMR123W DAL4Q04895 635 aa4.39□□□□□ -1.71
PKR1YMR123W MSB1P21339 1137 aaKnown RBP4.38□□□□□ -1.71
PKR1YMR123W YKR073CP36153 106 aa4.38□□□□□ -1.71
PKR1YMR123W SPO74P45819 413 aa4.38□□□□□ -1.71
PKR1YMR123W ALO1P54783 526 aaKnown RBP4.38□□□□□ -1.71
PKR1YMR123W ULP1Q02724 621 aa4.38□□□□□ -1.71
PKR1YMR123W MED7Q08278 222 aa4.38□□□□□ -1.71
PKR1YMR123W TRP3P00937 484 aa4.37□□□□□ -1.71
PKR1YMR123W HXK1P04806 485 aaKnown RBP4.37□□□□□ -1.71
PKR1YMR123W UGA4P32837 571 aa4.37□□□□□ -1.71
PKR1YMR123W RPT1P33299 467 aaKnown RBP4.37□□□□□ -1.71
PKR1YMR123W GPT2P36148 743 aa4.37□□□□□ -1.71
PKR1YMR123W NEM1P38757 446 aa4.37□□□□□ -1.71
PKR1YMR123W INP52P50942 1183 aa4.37□□□□□ -1.71
PKR1YMR123W YPL109CQ02981 657 aa4.37□□□□□ -1.71
PKR1YMR123W TOS4Q06266 489 aa4.37□□□□□ -1.71
PKR1YMR123W MAC1P35192 417 aa4.36□□□□□ -1.71
PKR1YMR123W OMA1P36163 345 aa4.36□□□□□ -1.71
PKR1YMR123W YGR130CP53278 816 aa4.36□□□□□ -1.71
PKR1YMR123W ADI1Q03677 179 aa4.36□□□□□ -1.71
PKR1YMR123W ALG6Q12001 544 aaKnown RBP4.36□□□□□ -1.71
PKR1YMR123W MSH3P25336 1018 aa4.35□□□□□ -1.71
PKR1YMR123W HEM3P28789 327 aa4.35□□□□□ -1.71
PKR1YMR123W SQT1P35184 431 aa4.35□□□□□ -1.71
PKR1YMR123W FAA3P39002 694 aa4.35□□□□□ -1.71
PKR1YMR123W MSH4P40965 878 aaPredicted RBP4.35□□□□□ -1.71
PKR1YMR123W MMM1P41800 426 aa4.35□□□□□ -1.71
PKR1YMR123W SLS1P42900 643 aa4.35□□□□□ -1.71
PKR1YMR123W MTR4P47047 1073 aaKnown RBP4.35□□□□□ -1.71
PKR1YMR123W RSM26P47141 266 aa4.35□□□□□ -1.71
PKR1YMR123W ALT1P52893 592 aa4.35□□□□□ -1.71
PKR1YMR123W YGR045CP53229 120 aa4.35□□□□□ -1.71
PKR1YMR123W RRP15Q06511 250 aaPredicted RBP4.35□□□□□ -1.71
PKR1YMR123W CYC7P00045 113 aa4.34□□□□□ -1.71
PKR1YMR123W VMA4P22203 233 aaKnown RBP4.34□□□□□ -1.71
PKR1YMR123W PUB1P32588 453 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71 RIP-Chip
PKR1YMR123W SMY2P32909 740 aaKnown RBP4.34□□□□□ -1.71
PKR1YMR123W TOS1P38288 455 aa4.34□□□□□ -1.71
PKR1YMR123W MGE1P38523 228 aa4.34□□□□□ -1.71
PKR1YMR123W PEX28P38848 579 aa4.34□□□□□ -1.71
PKR1YMR123W CIT3P43635 486 aa4.34□□□□□ -1.71
PKR1YMR123W POL32P47110 350 aa4.34□□□□□ -1.71
PKR1YMR123W YGR122WP53272 402 aa4.34□□□□□ -1.71
PKR1YMR123W UTP5Q04177 643 aaKnown RBP4.34□□□□□ -1.71
PKR1YMR123W AVO1Q08236 1176 aa4.34□□□□□ -1.71
PKR1YMR123W YOR059CQ08448 450 aaKnown RBP4.34□□□□□ -1.71
PKR1YMR123W RPS4AP0CX35 261 aaKnown RBP4.33□□□□□ -1.72
PKR1YMR123W RPS4BP0CX36 261 aaKnown RBP4.33□□□□□ -1.72
PKR1YMR123W SEC23P15303 768 aaKnown RBP4.33□□□□□ -1.72
PKR1YMR123W WHI3P34761 661 aaKnown RBP4.33□□□□□ -1.72
PKR1YMR123W NNK1P36003 928 aa4.33□□□□□ -1.72
PKR1YMR123W RDH54P38086 958 aa4.33□□□□□ -1.72
PKR1YMR123W YGL140CP53120 1219 aa4.33□□□□□ -1.72
PKR1YMR123W ELA1P53861 379 aaPredicted RBP4.33□□□□□ -1.72
PKR1YMR123W PEX13P80667 386 aa4.33□□□□□ -1.72
PKR1YMR123W NFS1P25374 497 aa4.32□□□□□ -1.72
PKR1YMR123W ASF1P32447 279 aa4.32□□□□□ -1.72
PKR1YMR123W YAR028WP39548 234 aa4.32□□□□□ -1.72
PKR1YMR123W XKS1P42826 600 aa4.32□□□□□ -1.72
PKR1YMR123W YJR107WP47145 328 aa4.32□□□□□ -1.72
PKR1YMR123W MAG2Q06436 670 aaKnown RBP4.32□□□□□ -1.72
PKR1YMR123W BRE4Q07660 1125 aa4.32□□□□□ -1.72
PKR1YMR123W MCD1Q12158 566 aa4.32□□□□□ -1.72
PKR1YMR123W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
PKR1YMR123W TAF13P11747 167 aa4.31□□□□□ -1.72
PKR1YMR123W ATE1P16639 503 aa4.31□□□□□ -1.72
PKR1YMR123W PIC2P40035 300 aa4.31□□□□□ -1.72
PKR1YMR123W CTH1P47976 325 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms