RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W TY1A-ER1P0CX71 440 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-LR2P0CX72 440 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-PLP0CX73 440 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-JR1P0CX74 440 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-LR3P0CX75 440 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-ML2P0CX76 440 aa6.83□□□□□ -1.32
SPO20YMR017W SAC7P17121 654 aa6.83□□□□□ -1.32
SPO20YMR017W MSH3P25336 1018 aa6.83□□□□□ -1.32
SPO20YMR017W PEX28P38848 579 aa6.83□□□□□ -1.32
SPO20YMR017W POL5P39985 1022 aaKnown RBP6.83□□□□□ -1.32
SPO20YMR017W UTP22P53254 1237 aaPredicted RBP6.83□□□□□ -1.32
SPO20YMR017W THI72Q08579 599 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-GR1Q12085 440 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.83□□□□□ -1.32
SPO20YMR017W TY4A-HQ6Q5P6 413 aa6.83□□□□□ -1.32
SPO20YMR017W TY1A-OLQ92392 440 aaKnown RBP6.83□□□□□ -1.32
SPO20YMR017W NAP1P25293 417 aaKnown RBP6.82□□□□□ -1.32
SPO20YMR017W EXO5P38289 585 aa6.82□□□□□ -1.32
SPO20YMR017W YFL066CP43538 392 aa6.82□□□□□ -1.32
SPO20YMR017W PET112P33893 541 aa6.81□□□□□ -1.32
SPO20YMR017W YKL077WP36081 392 aa6.81□□□□□ -1.32
SPO20YMR017W RRM3P38766 723 aa6.81□□□□□ -1.32
SPO20YMR017W NSG2P53898 299 aa6.81□□□□□ -1.32
SPO20YMR017W TDA6Q06466 467 aa6.81□□□□□ -1.32
SPO20YMR017W ELG1Q12050 791 aa6.81□□□□□ -1.32
SPO20YMR017W XKS1P42826 600 aa6.8□□□□□ -1.32
SPO20YMR017W YGL140CP53120 1219 aa6.8□□□□□ -1.32
SPO20YMR017W SEC23P15303 768 aaKnown RBP6.79□□□□□ -1.32
SPO20YMR017W MDJ1P35191 511 aa6.79□□□□□ -1.32
SPO20YMR017W GCV1P48015 400 aa6.79□□□□□ -1.32
SPO20YMR017W DSE4P53753 1117 aa6.79□□□□□ -1.32
SPO20YMR017W ERS1P17261 260 aa6.78□□□□□ -1.32
SPO20YMR017W MAE1P36013 669 aaKnown RBP6.78□□□□□ -1.32
SPO20YMR017W MCX1P38323 520 aaPredicted RBP6.78□□□□□ -1.32
SPO20YMR017W MAD1P40957 749 aa6.78□□□□□ -1.32
SPO20YMR017W FAR11P53917 953 aa6.78□□□□□ -1.32
SPO20YMR017W YMR074CQ04773 145 aa6.78□□□□□ -1.32
SPO20YMR017W MNR2P35724 969 aa6.77□□□□□ -1.33
SPO20YMR017W NEM1P38757 446 aa6.77□□□□□ -1.33
SPO20YMR017W MEC3Q02574 474 aa6.77□□□□□ -1.33
SPO20YMR017W VPS16Q03308 798 aa6.77□□□□□ -1.33
SPO20YMR017W MRL1Q06815 381 aa6.77□□□□□ -1.33
SPO20YMR017W GAS5Q08193 484 aa6.77□□□□□ -1.33
SPO20YMR017W GCR1P07261 785 aa6.76□□□□□ -1.33
SPO20YMR017W HEM13P11353 328 aaKnown RBP6.76□□□□□ -1.33
SPO20YMR017W CLN2P20438 545 aa6.76□□□□□ -1.33
SPO20YMR017W VMA4P22203 233 aaKnown RBP6.76□□□□□ -1.33
SPO20YMR017W SLS1P42900 643 aa6.76□□□□□ -1.33
SPO20YMR017W MTR4P47047 1073 aaKnown RBP6.76□□□□□ -1.33
SPO20YMR017W PIN2Q12057 282 aa6.76□□□□□ -1.33
SPO20YMR017W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SPO20YMR017W TAF13P11747 167 aa6.75□□□□□ -1.33
SPO20YMR017W RDH54P38086 958 aa6.75□□□□□ -1.33
SPO20YMR017W ARL1P38116 183 aaKnown RBP6.75□□□□□ -1.33
SPO20YMR017W REI1P38344 393 aaPredicted RBP6.75□□□□□ -1.33
SPO20YMR017W BUD9P53226 547 aa6.75□□□□□ -1.33
SPO20YMR017W HDA2Q06629 674 aa6.75□□□□□ -1.33
SPO20YMR017W YLL054CQ12244 843 aa6.75□□□□□ -1.33
SPO20YMR017W TY1A-NL1Q12391 440 aaKnown RBP6.75□□□□□ -1.33
SPO20YMR017W KIP3P53086 805 aaKnown RBP6.74□□□□□ -1.33
SPO20YMR017W UTP5Q04177 643 aaKnown RBP6.74□□□□□ -1.33
SPO20YMR017W MAG2Q06436 670 aaKnown RBP6.74□□□□□ -1.33
SPO20YMR017W PHM7Q12252 991 aa6.74□□□□□ -1.33
SPO20YMR017W CDC34P14682 295 aa6.73□□□□□ -1.33
SPO20YMR017W SFA1P32771 386 aa6.73□□□□□ -1.33
SPO20YMR017W GNP1P48813 663 aa6.73□□□□□ -1.33
SPO20YMR017W RTT10Q08924 1013 aa6.73□□□□□ -1.33
SPO20YMR017W ALG6Q12001 544 aaKnown RBP6.73□□□□□ -1.33
SPO20YMR017W YOR223WQ12015 292 aa6.73□□□□□ -1.33
SPO20YMR017W REC8Q12188 680 aa6.73□□□□□ -1.33
SPO20YMR017W YDR215CQ12240 137 aa6.73□□□□□ -1.33
SPO20YMR017W AI3P03877 415 aa6.72□□□□□ -1.33
SPO20YMR017W DUT1P33317 147 aa6.72□□□□□ -1.33
SPO20YMR017W PRY1P47032 299 aa6.72□□□□□ -1.33
SPO20YMR017W ALD6P54115 500 aaKnown RBP6.72□□□□□ -1.33
SPO20YMR017W YMR187CQ03236 431 aa6.72□□□□□ -1.33
SPO20YMR017W YPR053CQ6Q5F3 151 aa6.72□□□□□ -1.33
SPO20YMR017W DED1P06634 604 aaKnown RBP6.71□□□□□ -1.34
SPO20YMR017W SPO74P45819 413 aa6.71□□□□□ -1.34
SPO20YMR017W SIW14P53965 281 aa6.71□□□□□ -1.34
SPO20YMR017W ATG14P38270 344 aa6.7□□□□□ -1.34
SPO20YMR017W SLN1P39928 1220 aaPredicted RBP6.7□□□□□ -1.34
SPO20YMR017W VAC8P39968 578 aa6.7□□□□□ -1.34
SPO20YMR017W NCE103P53615 221 aa6.7□□□□□ -1.34
SPO20YMR017W CWC24P53769 259 aa6.7□□□□□ -1.34
SPO20YMR017W ROD1Q02805 837 aa6.7□□□□□ -1.34
SPO20YMR017W DOT1Q04089 582 aaKnown RBP6.7□□□□□ -1.34
SPO20YMR017W EST2Q06163 884 aa6.7□□□□□ -1.34
SPO20YMR017W YCK2P23292 546 aaKnown RBP6.69□□□□□ -1.34
SPO20YMR017W RSC6P25632 483 aa6.69□□□□□ -1.34
SPO20YMR017W RAD27P26793 382 aa6.69□□□□□ -1.34
SPO20YMR017W ADD66P36040 267 aa6.69□□□□□ -1.34
SPO20YMR017W HXT13P39924 564 aa6.69□□□□□ -1.34
SPO20YMR017W ICP55P40051 511 aa6.69□□□□□ -1.34
SPO20YMR017W ENT3P47160 408 aa6.69□□□□□ -1.34
SPO20YMR017W FAA4P47912 694 aaKnown RBP6.69□□□□□ -1.34
SPO20YMR017W HXT17P53631 564 aa6.69□□□□□ -1.34
SPO20YMR017W HXT15P54854 567 aa6.69□□□□□ -1.34
SPO20YMR017W AVO1Q08236 1176 aa6.69□□□□□ -1.34
SPO20YMR017W TMA46Q12000 345 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms