RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C CCH1P50077 2039 aa2.19□□□□□ -2.06
IRC20YLR247C RED1P14291 827 aa2.19□□□□□ -2.06
IRC20YLR247C DJP1P40564 432 aa2.19□□□□□ -2.06
IRC20YLR247C YEL077CQ3E7X8 1277 aa2.19□□□□□ -2.06
IRC20YLR247C OCT1P35999 772 aa2.19□□□□□ -2.06
IRC20YLR247C EBP2P36049 427 aaKnown RBP2.19□□□□□ -2.06
IRC20YLR247C PKC1P24583 1151 aa2.18□□□□□ -2.06
IRC20YLR247C HGH1P48362 394 aaKnown RBP2.18□□□□□ -2.06
IRC20YLR247C RGT1P32862 1170 aa2.18□□□□□ -2.06
IRC20YLR247C YKR018CP36114 725 aa2.18□□□□□ -2.06
IRC20YLR247C FOL2P51601 243 aaKnown RBP2.18□□□□□ -2.06
IRC20YLR247C RRP46P53256 223 aaPredicted RBP2.18□□□□□ -2.06
IRC20YLR247C YOL057WQ08225 711 aa2.18□□□□□ -2.06
IRC20YLR247C PCL8Q08966 492 aa2.18□□□□□ -2.06
IRC20YLR247C HIF1Q12373 385 aa2.18□□□□□ -2.06
IRC20YLR247C MAM1P40065 302 aa2.18□□□□□ -2.06
IRC20YLR247C ZDS2P54786 942 aa2.18□□□□□ -2.06
IRC20YLR247C TOS4Q06266 489 aa2.18□□□□□ -2.06
IRC20YLR247C YGL082WP53155 381 aa2.18□□□□□ -2.06
IRC20YLR247C CDC73Q06697 393 aa2.18□□□□□ -2.06
IRC20YLR247C ERG12P07277 443 aa2.17□□□□□ -2.06
IRC20YLR247C SPT5P27692 1063 aaKnown RBP2.17□□□□□ -2.06
IRC20YLR247C MRF1P30775 413 aaPredicted RBP2.17□□□□□ -2.06
IRC20YLR247C SYN8P31377 255 aa2.17□□□□□ -2.06
IRC20YLR247C MGM1P32266 881 aa2.17□□□□□ -2.06
IRC20YLR247C GCD11P32481 527 aaKnown RBP2.17□□□□□ -2.06
IRC20YLR247C BRL1P38770 471 aa2.17□□□□□ -2.06
IRC20YLR247C IRC4Q03036 179 aa2.17□□□□□ -2.06
IRC20YLR247C YRR1Q12172 810 aa2.17□□□□□ -2.06
IRC20YLR247C PHR1P05066 565 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
IRC20YLR247C RNR4P49723 345 aaKnown RBP2.17□□□□□ -2.06
IRC20YLR247C FAB1P34756 2278 aa2.17□□□□□ -2.06
IRC20YLR247C GPB2P39717 880 aa2.17□□□□□ -2.06
IRC20YLR247C ATG3P40344 310 aa2.17□□□□□ -2.06
IRC20YLR247C RPT4P53549 437 aaKnown RBP2.17□□□□□ -2.06
IRC20YLR247C NSE3Q05541 303 aa2.17□□□□□ -2.06
IRC20YLR247C SKG3Q06315 1026 aa2.17□□□□□ -2.06
IRC20YLR247C MAK21Q12176 1025 aaKnown RBP2.17□□□□□ -2.06
IRC20YLR247C LAA1P39526 2014 aa2.17□□□□□ -2.06
IRC20YLR247C TPS3P38426 1054 aaKnown RBP2.16□□□□□ -2.06
IRC20YLR247C SOL3P38858 249 aa2.16□□□□□ -2.06
IRC20YLR247C VAB2P40003 282 aa2.16□□□□□ -2.06
IRC20YLR247C SYH1Q02875 849 aaKnown RBP2.16□□□□□ -2.06
IRC20YLR247C RPS7AP26786 190 aaKnown RBP2.16□□□□□ -2.06
IRC20YLR247C APL2P36000 726 aaPredicted RBP2.16□□□□□ -2.06
IRC20YLR247C ILV3P39522 585 aaKnown RBP2.16□□□□□ -2.06
IRC20YLR247C DNM1P54861 757 aa2.16□□□□□ -2.06
IRC20YLR247C UBX5Q06682 500 aa2.16□□□□□ -2.06
IRC20YLR247C SPT16P32558 1035 aaKnown RBP2.16□□□□□ -2.06
IRC20YLR247C ARP1P38696 384 aa2.16□□□□□ -2.06
IRC20YLR247C CST6P40535 587 aa2.16□□□□□ -2.06
IRC20YLR247C YML020WQ03722 664 aa2.16□□□□□ -2.06
IRC20YLR247C CSC1Q06538 782 aa2.16□□□□□ -2.06
IRC20YLR247C TOA1P32773 286 aa2.15□□□□□ -2.06
IRC20YLR247C LYS14P40971 790 aa2.15□□□□□ -2.06
IRC20YLR247C MET7Q08645 548 aa2.15□□□□□ -2.06
IRC20YLR247C SUP35P05453 685 aaKnown RBP2.15□□□□□ -2.06
IRC20YLR247C BIO2P32451 375 aa2.15□□□□□ -2.06
IRC20YLR247C DMA1P38823 416 aa2.15□□□□□ -2.06
IRC20YLR247C OYE3P41816 400 aaPredicted RBP2.15□□□□□ -2.06
IRC20YLR247C TSR2Q06672 205 aaKnown RBP2.15□□□□□ -2.07
IRC20YLR247C GUD1Q07729 489 aa2.15□□□□□ -2.07
IRC20YLR247C TFB4Q12004 338 aa2.15□□□□□ -2.07
IRC20YLR247C JIP3O13555 125 aa2.15□□□□□ -2.07
IRC20YLR247C COG8Q04632 607 aa2.15□□□□□ -2.07
IRC20YLR247C YLR326WQ06170 240 aaKnown RBP2.15□□□□□ -2.07
IRC20YLR247C HSP82P02829 709 aaKnown RBP2.14□□□□□ -2.07
IRC20YLR247C PUP2P32379 260 aa2.14□□□□□ -2.07
IRC20YLR247C EUG1P32474 517 aa2.14□□□□□ -2.07
IRC20YLR247C GEF1P37020 779 aa2.14□□□□□ -2.07
IRC20YLR247C YFH7P43591 353 aa2.14□□□□□ -2.07
IRC20YLR247C GIR2Q03768 265 aaPredicted RBP2.14□□□□□ -2.07
IRC20YLR247C YML082WQ04533 649 aaKnown RBP2.14□□□□□ -2.07
IRC20YLR247C YDR524C-BQ3E6R4 66 aa2.14□□□□□ -2.07
IRC20YLR247C RPS9AO13516 197 aaKnown RBP2.14□□□□□ -2.07
IRC20YLR247C IDI1P15496 288 aa2.14□□□□□ -2.07
IRC20YLR247C JHD1P40034 492 aa2.14□□□□□ -2.07
IRC20YLR247C JJJ1P53863 590 aa2.14□□□□□ -2.07
IRC20YLR247C SUB2Q07478 446 aaKnown RBP2.14□□□□□ -2.07
IRC20YLR247C ITC1P53125 1264 aa2.14□□□□□ -2.07
IRC20YLR247C THI3Q07471 609 aa2.14□□□□□ -2.07
IRC20YLR247C PLP2Q12017 286 aa2.14□□□□□ -2.07
IRC20YLR247C MAM3Q12296 706 aa2.14□□□□□ -2.07
IRC20YLR247C HAL5P38970 855 aaKnown RBP2.14□□□□□ -2.07
IRC20YLR247C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
IRC20YLR247C APL6P46682 809 aa2.14□□□□□ -2.07
IRC20YLR247C SNU71P53207 620 aaKnown RBP2.14□□□□□ -2.07
IRC20YLR247C GCR2Q01722 534 aa2.14□□□□□ -2.07
IRC20YLR247C VPS64Q03944 604 aa2.14□□□□□ -2.07
IRC20YLR247C NOP8Q08287 484 aaPredicted RBP2.14□□□□□ -2.07
IRC20YLR247C POT1P27796 417 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
IRC20YLR247C HUL4P40985 892 aa2.13□□□□□ -2.07
IRC20YLR247C COQ4O13525 335 aa2.13□□□□□ -2.07
IRC20YLR247C CYB2P00175 591 aa2.13□□□□□ -2.07
IRC20YLR247C TPM1P17536 199 aaKnown RBP2.13□□□□□ -2.07
IRC20YLR247C DBP7P36120 742 aaKnown RBP2.13□□□□□ -2.07
IRC20YLR247C UBP14P38237 781 aaKnown RBP2.13□□□□□ -2.07
IRC20YLR247C RIM4P38741 713 aa2.13□□□□□ -2.07
IRC20YLR247C RIX1P38883 763 aaPredicted RBP2.13□□□□□ -2.07
IRC20YLR247C PES4P39684 611 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms