RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C CIC1P38779 376 aaKnown RBP7.13□□□□□ -1.27
DEF1YKL054C RTA1P53047 317 aa7.13□□□□□ -1.27
DEF1YKL054C NPR1P22211 790 aa7.12□□□□□ -1.27
DEF1YKL054C GGA2P38817 585 aaKnown RBP7.12□□□□□ -1.27
DEF1YKL054C FAF1P40546 346 aaPredicted RBP7.12□□□□□ -1.27
DEF1YKL054C TFB2Q02939 513 aa7.12□□□□□ -1.27
DEF1YKL054C MET32Q12041 191 aa7.12□□□□□ -1.27
DEF1YKL054C RPS6AP0CX37 236 aaKnown RBP7.11□□□□□ -1.27
DEF1YKL054C RPS6BP0CX38 236 aaPredicted RBP7.11□□□□□ -1.27
DEF1YKL054C PGI1P12709 554 aaKnown RBP7.11□□□□□ -1.27
DEF1YKL054C PIC2P40035 300 aa7.11□□□□□ -1.27
DEF1YKL054C YJR115WP47152 169 aa7.11□□□□□ -1.27
DEF1YKL054C YNL034WP53963 612 aa7.11□□□□□ -1.27
DEF1YKL054C YNL018CP53976 612 aa7.11□□□□□ -1.27
DEF1YKL054C UBX4P54730 416 aa7.11□□□□□ -1.27
DEF1YKL054C MDM1Q01846 1127 aa7.11□□□□□ -1.27
DEF1YKL054C TAF8Q03750 510 aa7.11□□□□□ -1.27
DEF1YKL054C DAL4Q04895 635 aa7.11□□□□□ -1.27
DEF1YKL054C BSC2Q05611 235 aa7.11□□□□□ -1.27
DEF1YKL054C GCR1P07261 785 aa7.11□□□□□ -1.27
DEF1YKL054C UGA4P32837 571 aa7.11□□□□□ -1.27
DEF1YKL054C MRT4P33201 236 aaKnown RBP7.11□□□□□ -1.27
DEF1YKL054C EMW1P42842 904 aaKnown RBP7.11□□□□□ -1.27
DEF1YKL054C SUT1P53032 299 aaKnown RBP7.11□□□□□ -1.27
DEF1YKL054C APP1P53933 587 aa7.11□□□□□ -1.27
DEF1YKL054C YPL109CQ02981 657 aa7.11□□□□□ -1.27
DEF1YKL054C UGO1Q03327 502 aa7.11□□□□□ -1.27
DEF1YKL054C FMP25Q08023 583 aa7.11□□□□□ -1.27
DEF1YKL054C HSC82P15108 705 aaKnown RBP7.1□□□□□ -1.27
DEF1YKL054C YBR071WP38243 211 aa7.1□□□□□ -1.27
DEF1YKL054C HXT5P38695 592 aa7.1□□□□□ -1.27
DEF1YKL054C SRC1Q03707 834 aa7.1□□□□□ -1.27
DEF1YKL054C FAL1Q12099 399 aaKnown RBP7.1□□□□□ -1.27
DEF1YKL054C NYV1Q12255 253 aa7.1□□□□□ -1.27
DEF1YKL054C SWI5P08153 709 aa7.09□□□□□ -1.27
DEF1YKL054C PEA2P40091 420 aa7.09□□□□□ -1.27
DEF1YKL054C SST2P11972 698 aaKnown RBP7.09□□□□□ -1.27
DEF1YKL054C BET3P36149 193 aa7.09□□□□□ -1.27
DEF1YKL054C REC8Q12188 680 aa7.09□□□□□ -1.27
DEF1YKL054C MPD2Q99316 277 aa7.09□□□□□ -1.27
DEF1YKL054C HSP60P19882 572 aaKnown RBP7.08□□□□□ -1.28
DEF1YKL054C SFP1P32432 683 aa7.08□□□□□ -1.28
DEF1YKL054C BLI1P35727 113 aa7.08□□□□□ -1.28
DEF1YKL054C PMT3P47190 753 aa7.08□□□□□ -1.28
DEF1YKL054C ALO1P54783 526 aaKnown RBP7.08□□□□□ -1.28
DEF1YKL054C SPO75Q07798 868 aa7.08□□□□□ -1.28
DEF1YKL054C THI73Q07904 523 aa7.08□□□□□ -1.28
DEF1YKL054C TAF13P11747 167 aa7.08□□□□□ -1.28
DEF1YKL054C MRPL33P20084 86 aa7.08□□□□□ -1.28
DEF1YKL054C PUF4P25339 888 aaKnown RBP RIP-Chip data7.08□□□□□ -1.28 RIP-Chip
DEF1YKL054C EUG1P32474 517 aa7.08□□□□□ -1.28
DEF1YKL054C PRP40P33203 583 aaKnown RBP7.08□□□□□ -1.28
DEF1YKL054C GNP1P48813 663 aa7.08□□□□□ -1.28
DEF1YKL054C SPC105P53148 917 aa7.08□□□□□ -1.28
DEF1YKL054C INP54Q08227 384 aaKnown RBP7.08□□□□□ -1.28
DEF1YKL054C RTT10Q08924 1013 aa7.08□□□□□ -1.28
DEF1YKL054C BAS1P22035 811 aa7.07□□□□□ -1.28
DEF1YKL054C PIP2P52960 996 aa7.07□□□□□ -1.28
DEF1YKL054C YLR001CQ07895 862 aa7.07□□□□□ -1.28
DEF1YKL054C FOB1O13329 566 aa7.07□□□□□ -1.28
DEF1YKL054C OPI1P21957 404 aa7.07□□□□□ -1.28
DEF1YKL054C EXO84P38261 753 aa7.07□□□□□ -1.28
DEF1YKL054C HLJ1P48353 224 aa7.07□□□□□ -1.28
DEF1YKL054C YNL193WP53870 558 aa7.07□□□□□ -1.28
DEF1YKL054C OSH2Q12451 1283 aa7.07□□□□□ -1.28
DEF1YKL054C RTP1Q12751 981 aa7.07□□□□□ -1.28
DEF1YKL054C CDC4P07834 779 aa7.06□□□□□ -1.28
DEF1YKL054C YEF3P16521 1044 aaKnown RBP7.06□□□□□ -1.28
DEF1YKL054C MCM5P29496 775 aaKnown RBP7.06□□□□□ -1.28
DEF1YKL054C PLC1P32383 869 aa7.06□□□□□ -1.28
DEF1YKL054C MKK2P32491 506 aa7.06□□□□□ -1.28
DEF1YKL054C UME1Q03010 460 aa7.06□□□□□ -1.28
DEF1YKL054C YCS4Q06156 1176 aa7.06□□□□□ -1.28
DEF1YKL054C AGP1P25376 633 aa7.05□□□□□ -1.28
DEF1YKL054C SEA4P38164 1038 aa7.05□□□□□ -1.28
DEF1YKL054C RRP8P38961 392 aaKnown RBP7.05□□□□□ -1.28
DEF1YKL054C SHE9Q04172 456 aa7.05□□□□□ -1.28
DEF1YKL054C PSK2Q08217 1101 aa7.05□□□□□ -1.28
DEF1YKL054C TRZ1P36159 838 aaPredicted RBP7.05□□□□□ -1.28
DEF1YKL054C IRR1P40541 1150 aa7.05□□□□□ -1.28
DEF1YKL054C MEH1Q02205 184 aa7.05□□□□□ -1.28
DEF1YKL054C PEX6P33760 1030 aa7.04□□□□□ -1.28
DEF1YKL054C YBL086CP38177 466 aa7.04□□□□□ -1.28
DEF1YKL054C YAP1801P38856 637 aa7.04□□□□□ -1.28
DEF1YKL054C UTP8P53276 713 aaKnown RBP7.04□□□□□ -1.28
DEF1YKL054C MET14Q02196 202 aa7.04□□□□□ -1.28
DEF1YKL054C ATG20Q07528 640 aa7.04□□□□□ -1.28
DEF1YKL054C GAL1P04385 528 aa7.04□□□□□ -1.28
DEF1YKL054C SBP1P10080 294 aaKnown RBP7.04□□□□□ -1.28
DEF1YKL054C MEF1P25039 761 aa7.04□□□□□ -1.28
DEF1YKL054C SMC1P32908 1225 aa7.04□□□□□ -1.28
DEF1YKL054C HSE1P38753 452 aa7.04□□□□□ -1.28
DEF1YKL054C MPP10P47083 593 aaKnown RBP7.04□□□□□ -1.28
DEF1YKL054C PEX14P53112 341 aa7.04□□□□□ -1.28
DEF1YKL054C ADI1Q03677 179 aa7.04□□□□□ -1.28
DEF1YKL054C VPS5Q92331 675 aa7.04□□□□□ -1.28
DEF1YKL054C HXT8P40886 569 aa7.03□□□□□ -1.28
DEF1YKL054C ULP1Q02724 621 aa7.03□□□□□ -1.28
DEF1YKL054C YOL087CQ99247 1116 aa7.03□□□□□ -1.28
DEF1YKL054C VBA5P36172 582 aa7.03□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms