RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeastyeast

Gene PXR1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PXR1YGR280C NMA111P53920 997 aa5.6□□□□□ -1.51
PXR1YGR280C SWI1P09547 1314 aa5.59□□□□□ -1.51
PXR1YGR280C RGT1P32862 1170 aa5.59□□□□□ -1.51
PXR1YGR280C RAM1P22007 431 aa5.58□□□□□ -1.52
PXR1YGR280C YBL028CP38202 106 aa5.58□□□□□ -1.52
PXR1YGR280C HXT5P38695 592 aa5.58□□□□□ -1.52
PXR1YGR280C SPT2P06843 333 aaPredicted RBP5.57□□□□□ -1.52
PXR1YGR280C VMA2P16140 517 aaKnown RBP5.57□□□□□ -1.52
PXR1YGR280C NOC2P39744 710 aaKnown RBP5.57□□□□□ -1.52
PXR1YGR280C RMD1Q03441 430 aa5.57□□□□□ -1.52
PXR1YGR280C TUB2P02557 457 aaKnown RBP5.56□□□□□ -1.52
PXR1YGR280C SUP35P05453 685 aaKnown RBP5.56□□□□□ -1.52
PXR1YGR280C IDI1P15496 288 aa5.56□□□□□ -1.52
PXR1YGR280C RPT3P33298 428 aaKnown RBP5.56□□□□□ -1.52
PXR1YGR280C SKP2P42843 763 aa5.56□□□□□ -1.52
PXR1YGR280C GCR2Q01722 534 aa5.56□□□□□ -1.52
PXR1YGR280C SUB2Q07478 446 aaKnown RBP5.56□□□□□ -1.52
PXR1YGR280C RTR1P40084 226 aaPredicted RBP5.55□□□□□ -1.52
PXR1YGR280C APL6P46682 809 aa5.55□□□□□ -1.52
PXR1YGR280C DUS4Q06063 367 aa5.55□□□□□ -1.52
PXR1YGR280C YDR461C-AQ2V2P7 80 aa5.55□□□□□ -1.52
PXR1YGR280C YEL077CQ3E7X8 1277 aa5.55□□□□□ -1.52
PXR1YGR280C GCN1P33892 2672 aaKnown RBP5.55□□□□□ -1.52
PXR1YGR280C CAD1P24813 409 aaKnown RBP5.54□□□□□ -1.52
PXR1YGR280C HUL4P40985 892 aa5.54□□□□□ -1.52
PXR1YGR280C YFH7P43591 353 aa5.54□□□□□ -1.52
PXR1YGR280C VPS70P47161 811 aa5.54□□□□□ -1.52
PXR1YGR280C YAF9P53930 226 aa5.54□□□□□ -1.52
PXR1YGR280C IRA2P19158 3079 aa5.54□□□□□ -1.52
PXR1YGR280C FMP27Q06179 2628 aa5.53□□□□□ -1.52
PXR1YGR280C MCM3P24279 971 aaKnown RBP5.53□□□□□ -1.52
PXR1YGR280C PER1P25625 357 aa5.53□□□□□ -1.52
PXR1YGR280C POT1P27796 417 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PXR1YGR280C SRP40P32583 406 aaPredicted RBP5.53□□□□□ -1.52
PXR1YGR280C FMP10P40098 244 aa5.53□□□□□ -1.52
PXR1YGR280C YNL115CP53925 644 aa5.53□□□□□ -1.52
PXR1YGR280C BUL2Q03758 920 aaKnown RBP5.53□□□□□ -1.52
PXR1YGR280C UBX5Q06682 500 aa5.53□□□□□ -1.52
PXR1YGR280C PDC1P06169 563 aaKnown RBP5.52□□□□□ -1.53
PXR1YGR280C PPZ1P26570 692 aa5.52□□□□□ -1.53
PXR1YGR280C NPL4P33755 580 aa5.52□□□□□ -1.53
PXR1YGR280C GPB2P39717 880 aa5.52□□□□□ -1.53
PXR1YGR280C NUG1P40010 520 aaKnown RBP5.52□□□□□ -1.53
PXR1YGR280C MPP10P47083 593 aaKnown RBP5.52□□□□□ -1.53
PXR1YGR280C VPS72Q03388 795 aa5.52□□□□□ -1.53
PXR1YGR280C EMI2Q04409 500 aaKnown RBP5.52□□□□□ -1.53
PXR1YGR280C RTP1Q12751 981 aa5.52□□□□□ -1.53
PXR1YGR280C SAC3P46674 1301 aa5.51□□□□□ -1.53
PXR1YGR280C PHR1P05066 565 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
PXR1YGR280C URK1P27515 501 aa5.51□□□□□ -1.53
PXR1YGR280C SYN8P31377 255 aa5.51□□□□□ -1.53
PXR1YGR280C TOM71P38825 639 aaKnown RBP5.51□□□□□ -1.53
PXR1YGR280C SGM1P47166 707 aa5.51□□□□□ -1.53
PXR1YGR280C SNU71P53207 620 aaKnown RBP5.51□□□□□ -1.53
PXR1YGR280C HEH2Q03281 663 aa5.51□□□□□ -1.53
PXR1YGR280C ECM16Q04217 1267 aaKnown RBP5.51□□□□□ -1.53
PXR1YGR280C PSH1Q12161 406 aa5.51□□□□□ -1.53
PXR1YGR280C YBR287WP38355 427 aa5.5□□□□□ -1.53
PXR1YGR280C HAL5P38970 855 aaKnown RBP5.5□□□□□ -1.53
PXR1YGR280C ITC1P53125 1264 aa5.5□□□□□ -1.53
PXR1YGR280C YGR273CP53329 174 aa5.5□□□□□ -1.53
PXR1YGR280C DAK1P54838 584 aaKnown RBP5.5□□□□□ -1.53
PXR1YGR280C LCD1Q04377 747 aa5.5□□□□□ -1.53
PXR1YGR280C YPR148CQ06523 435 aa5.5□□□□□ -1.53
PXR1YGR280C IRC10Q08118 586 aa5.5□□□□□ -1.53
PXR1YGR280C ECM29P38737 1868 aa5.49□□□□□ -1.53
PXR1YGR280C SPB4P25808 606 aaPredicted RBP5.49□□□□□ -1.53
PXR1YGR280C MDL2P33311 773 aa5.49□□□□□ -1.53
PXR1YGR280C GPT2P36148 743 aa5.49□□□□□ -1.53
PXR1YGR280C GUA1P38625 525 aaKnown RBP5.49□□□□□ -1.53
PXR1YGR280C BRL1P38770 471 aa5.49□□□□□ -1.53
PXR1YGR280C YTA12P40341 825 aa5.49□□□□□ -1.53
PXR1YGR280C INP52P50942 1183 aa5.49□□□□□ -1.53
PXR1YGR280C BIO5P53744 561 aaKnown RBP5.49□□□□□ -1.53
PXR1YGR280C YNL050CP53952 270 aa5.49□□□□□ -1.53
PXR1YGR280C YDL124WQ07551 312 aaKnown RBP5.49□□□□□ -1.53
PXR1YGR280C MSC6Q08818 692 aaKnown RBP5.49□□□□□ -1.53
PXR1YGR280C COQ4O13525 335 aa5.48□□□□□ -1.53
PXR1YGR280C CDC19P00549 500 aaKnown RBP5.48□□□□□ -1.53
PXR1YGR280C KRS1P15180 591 aaKnown RBP5.48□□□□□ -1.53
PXR1YGR280C FUN12P39730 1002 aaKnown RBP5.48□□□□□ -1.53
PXR1YGR280C VPS53P47061 822 aa5.48□□□□□ -1.53
PXR1YGR280C YML037CQ03703 340 aa5.48□□□□□ -1.53
PXR1YGR280C MTC5Q03897 1148 aa5.48□□□□□ -1.53
PXR1YGR280C MFB1Q04922 465 aa5.48□□□□□ -1.53
PXR1YGR280C BMS1Q08965 1183 aaKnown RBP5.48□□□□□ -1.53
PXR1YGR280C PCL8Q08966 492 aa5.48□□□□□ -1.53
PXR1YGR280C ERG12P07277 443 aa5.47□□□□□ -1.53
PXR1YGR280C SWI6P09959 803 aa5.47□□□□□ -1.53
PXR1YGR280C KIN1P13185 1064 aa5.47□□□□□ -1.53
PXR1YGR280C YKR018CP36114 725 aa5.47□□□□□ -1.53
PXR1YGR280C NUP133P36161 1157 aa5.47□□□□□ -1.53
PXR1YGR280C NOP2P40991 618 aaKnown RBP5.47□□□□□ -1.53
PXR1YGR280C MET13P53128 600 aa5.47□□□□□ -1.53
PXR1YGR280C YNL034WP53963 612 aa5.47□□□□□ -1.53
PXR1YGR280C YNL018CP53976 612 aa5.47□□□□□ -1.53
PXR1YGR280C LAP2Q10740 671 aa5.47□□□□□ -1.53
PXR1YGR280C SNU66Q12420 587 aaPredicted RBP5.47□□□□□ -1.53
PXR1YGR280C RPP0P05317 312 aaKnown RBP5.46□□□□□ -1.54
PXR1YGR280C YUR1P26725 428 aa5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms