RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	NSG2	P53898	299 aa		5.26	□□□□□ -1.57
XKS1	YGR194C	RAV1	P47104	1357 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	GEF1	P37020	779 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	ISW1	P38144	1129 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	DRS2	P39524	1355 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	IDI1	P15496	288 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	SPE2	P21182	396 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	RPB10	P22139	70 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	MSP1	P28737	362 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	YER156C	P40093	338 aa	Known RBP	5.25	□□□□□ -1.57
XKS1	YGR194C	HXT8	P40886	569 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	PHM7	Q12252	991 aa		5.25	□□□□□ -1.57
XKS1	YGR194C	YSP2	Q06681	1438 aa		5.24	□□□□□ -1.57
XKS1	YGR194C	ARL1	P38116	183 aa	Known RBP	5.24	□□□□□ -1.57
XKS1	YGR194C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
XKS1	YGR194C	NTE1	Q04958	1679 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	DAL5	P15365	543 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	SUT1	P53032	299 aa	Known RBP	5.23	□□□□□ -1.57
XKS1	YGR194C	KAR5	Q04746	504 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	RPO21	P04050	1733 aa	Known RBP	5.23	□□□□□ -1.57
XKS1	YGR194C	YOR093C	Q12275	1648 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	CDC3	P32457	520 aa	Known RBP	5.23	□□□□□ -1.57
XKS1	YGR194C	YIL165C	P40446	119 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	RGD2	P43556	714 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	CTR9	P89105	1077 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	TDA6	Q06466	467 aa		5.23	□□□□□ -1.57
XKS1	YGR194C	MRP10	O75012	95 aa		5.22	□□□□□ -1.57
XKS1	YGR194C	YNR014W	P53719	212 aa		5.22	□□□□□ -1.57
XKS1	YGR194C	NOT3	P06102	836 aa	Known RBP	5.21	□□□□□ -1.58
XKS1	YGR194C	MET1	P36150	593 aa		5.21	□□□□□ -1.58
XKS1	YGR194C	BOI2	P39969	1040 aa		5.21	□□□□□ -1.58
XKS1	YGR194C	FIR1	P40020	876 aa		5.21	□□□□□ -1.58
XKS1	YGR194C	RTR1	P40084	226 aa	Predicted RBP	5.21	□□□□□ -1.58
XKS1	YGR194C	SAP155	P43612	1002 aa		5.21	□□□□□ -1.58
XKS1	YGR194C	EMG1	Q06287	252 aa	Known RBP	5.21	□□□□□ -1.58
XKS1	YGR194C	NOP58	Q12499	511 aa	Known RBP	5.21	□□□□□ -1.58
XKS1	YGR194C	BNR1	P40450	1375 aa		5.21	□□□□□ -1.58
XKS1	YGR194C	CHZ1	P40019	153 aa	Predicted RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	NTA1	P40354	457 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
XKS1	YGR194C	ATG1	P53104	897 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	IOC4	Q04213	475 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	PUS1	Q12211	544 aa	Known RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	PDR11	P40550	1411 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	TRL1	P09880	827 aa	Known RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	YEF3	P16521	1044 aa	Known RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	NAR1	P23503	491 aa	Known RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	MCX1	P38323	520 aa	Predicted RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	GLO3	P38682	493 aa	Known RBP	5.2	□□□□□ -1.58
XKS1	YGR194C	QDR1	P40475	563 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	POL32	P47110	350 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	DNF2	Q12675	1612 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	EDE1	P34216	1381 aa		5.2	□□□□□ -1.58
XKS1	YGR194C	PGM2	P37012	569 aa	Known RBP	5.19	□□□□□ -1.58
XKS1	YGR194C	MTC5	Q03897	1148 aa		5.19	□□□□□ -1.58
XKS1	YGR194C	GIS4	Q04233	774 aa		5.19	□□□□□ -1.58
XKS1	YGR194C	LSP1	Q12230	341 aa	Known RBP	5.19	□□□□□ -1.58
XKS1	YGR194C	SMC1	P32908	1225 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	YBR287W	P38355	427 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	RAD55	P38953	406 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	YIL092W	P40497	633 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	COG8	Q04632	607 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	ALG14	P38242	237 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	AIM46	P38885	310 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	PPT1	P53043	513 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	TIF6	Q12522	245 aa	Known RBP	5.18	□□□□□ -1.58
XKS1	YGR194C	YPR053C	Q6Q5F3	151 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	NHA1	Q99271	985 aa		5.18	□□□□□ -1.58
XKS1	YGR194C	SPO14	P36126	1683 aa		5.17	□□□□□ -1.58
XKS1	YGR194C	NAP1	P25293	417 aa	Known RBP	5.17	□□□□□ -1.58
XKS1	YGR194C	SKN7	P38889	622 aa		5.17	□□□□□ -1.58
XKS1	YGR194C	ACF4	P47129	309 aa		5.17	□□□□□ -1.58
XKS1	YGR194C	TAF8	Q03750	510 aa		5.17	□□□□□ -1.58
XKS1	YGR194C	RSC2	Q06488	889 aa		5.17	□□□□□ -1.58
XKS1	YGR194C	RPA190	P10964	1664 aa	Known RBP	5.17	□□□□□ -1.58
XKS1	YGR194C	TRM3	Q07527	1436 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	PSY2	P40164	858 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	YMR187C	Q03236	431 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	HAT1	Q12341	374 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	DOP1	Q03921	1698 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	YCK2	P23292	546 aa	Known RBP	5.16	□□□□□ -1.58
XKS1	YGR194C	IRS4	P36115	615 aa	Known RBP	5.16	□□□□□ -1.58
XKS1	YGR194C	YAP3	P38749	330 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	ERP5	P38819	212 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	RSC1	P53236	928 aa		5.16	□□□□□ -1.58
XKS1	YGR194C	MDJ2	P42834	146 aa		5.15	□□□□□ -1.59
XKS1	YGR194C	YJL181W	P46987	611 aa		5.15	□□□□□ -1.59
XKS1	YGR194C	UFD2	P54860	961 aa		5.15	□□□□□ -1.59
XKS1	YGR194C	YDR215C	Q12240	137 aa		5.15	□□□□□ -1.59
XKS1	YGR194C	YBL113C	Q7M4S9	792 aa		5.15	□□□□□ -1.59
XKS1	YGR194C	SNF2	P22082	1703 aa		5.15	□□□□□ -1.59
XKS1	YGR194C	CHC1	P22137	1653 aa	Known RBP	5.15	□□□□□ -1.59
XKS1	YGR194C	KRE5	P22023	1365 aa		5.14	□□□□□ -1.59
XKS1	YGR194C	INP51	P40559	946 aa	Known RBP	5.14	□□□□□ -1.59
XKS1	YGR194C	RRP46	P53256	223 aa	Predicted RBP	5.14	□□□□□ -1.59
XKS1	YGR194C	YGR130C	P53278	816 aa		5.14	□□□□□ -1.59
XKS1	YGR194C	PAP2	P53632	584 aa	Known RBP	5.14	□□□□□ -1.59
XKS1	YGR194C	LCD1	Q04377	747 aa		5.14	□□□□□ -1.59
XKS1	YGR194C	THI22	Q06490	572 aa		5.14	□□□□□ -1.59
XKS1	YGR194C	VMR1	P38735	1592 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms