RNA–Protein interactions for RNA: YGR081C

SLX9, Transcript of Protein required for pre-rRNA processing, yeastyeast

Gene SLX9, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX9YGR081C MCM5P29496 775 aaKnown RBP5.13□□□□□ -1.59
SLX9YGR081C PRP40P33203 583 aaKnown RBP5.13□□□□□ -1.59
SLX9YGR081C RVS167P39743 482 aaKnown RBP5.13□□□□□ -1.59
SLX9YGR081C FAR11P53917 953 aa5.13□□□□□ -1.59
SLX9YGR081C TY1A-GR1Q12085 440 aa5.13□□□□□ -1.59
SLX9YGR081C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.13□□□□□ -1.59
SLX9YGR081C TY1A-OLQ92392 440 aaKnown RBP5.13□□□□□ -1.59
SLX9YGR081C UGA4P32837 571 aa5.12□□□□□ -1.59
SLX9YGR081C SLD2P34252 453 aa5.12□□□□□ -1.59
SLX9YGR081C AKR1P39010 764 aa5.12□□□□□ -1.59
SLX9YGR081C COQ2P32378 372 aa5.11□□□□□ -1.59
SLX9YGR081C UTP22P53254 1237 aaPredicted RBP5.11□□□□□ -1.59
SLX9YGR081C YMR074CQ04773 145 aa5.11□□□□□ -1.59
SLX9YGR081C DAL4Q04895 635 aa5.11□□□□□ -1.59
SLX9YGR081C YOR223WQ12015 292 aa5.11□□□□□ -1.59
SLX9YGR081C YLR122CQ12312 125 aa5.11□□□□□ -1.59
SLX9YGR081C RPT1P33299 467 aaKnown RBP5.1□□□□□ -1.59
SLX9YGR081C EXO5P38289 585 aa5.1□□□□□ -1.59
SLX9YGR081C SAF1P38352 637 aa5.1□□□□□ -1.59
SLX9YGR081C FAA3P39002 694 aa5.1□□□□□ -1.59
SLX9YGR081C MEC3Q02574 474 aa5.1□□□□□ -1.59
SLX9YGR081C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
SLX9YGR081C NAM7P30771 971 aaKnown RBP5.09□□□□□ -1.59
SLX9YGR081C RRP15Q06511 250 aaPredicted RBP5.09□□□□□ -1.59
SLX9YGR081C SBP1P10080 294 aaKnown RBP5.08□□□□□ -1.6
SLX9YGR081C ULP1Q02724 621 aa5.08□□□□□ -1.6
SLX9YGR081C NOG1Q02892 647 aaKnown RBP5.08□□□□□ -1.6
SLX9YGR081C YPL109CQ02981 657 aa5.08□□□□□ -1.6
SLX9YGR081C DOT1Q04089 582 aaKnown RBP5.08□□□□□ -1.6
SLX9YGR081C OXR1Q08952 273 aa5.08□□□□□ -1.6
SLX9YGR081C YLL054CQ12244 843 aa5.08□□□□□ -1.6
SLX9YGR081C HXK1P04806 485 aaKnown RBP5.07□□□□□ -1.6
SLX9YGR081C KAR2P16474 682 aaKnown RBP5.07□□□□□ -1.6
SLX9YGR081C ATE1P16639 503 aa5.07□□□□□ -1.6
SLX9YGR081C KAE1P36132 386 aa5.07□□□□□ -1.6
SLX9YGR081C GPT2P36148 743 aa5.07□□□□□ -1.6
SLX9YGR081C ARL1P38116 183 aaKnown RBP5.07□□□□□ -1.6
SLX9YGR081C REI1P38344 393 aaPredicted RBP5.07□□□□□ -1.6
SLX9YGR081C NEM1P38757 446 aa5.07□□□□□ -1.6
SLX9YGR081C POL32P47110 350 aa5.07□□□□□ -1.6
SLX9YGR081C ALG6Q12001 544 aaKnown RBP5.07□□□□□ -1.6
SLX9YGR081C YKR073CP36153 106 aa5.06□□□□□ -1.6
SLX9YGR081C SHU2P38957 223 aa5.06□□□□□ -1.6
SLX9YGR081C TRP3P00937 484 aa5.05□□□□□ -1.6
SLX9YGR081C MSH3P25336 1018 aa5.05□□□□□ -1.6
SLX9YGR081C SLS1P42900 643 aa5.05□□□□□ -1.6
SLX9YGR081C RSM26P47141 266 aa5.05□□□□□ -1.6
SLX9YGR081C YJR107WP47145 328 aa5.05□□□□□ -1.6
SLX9YGR081C YGR122WP53272 402 aa5.05□□□□□ -1.6
SLX9YGR081C GIC2Q06648 383 aa5.05□□□□□ -1.6
SLX9YGR081C CHS2P14180 963 aa5.04□□□□□ -1.6
SLX9YGR081C HEM3P28789 327 aa5.04□□□□□ -1.6
SLX9YGR081C YKL077WP36081 392 aa5.04□□□□□ -1.6
SLX9YGR081C ALO1P54783 526 aaKnown RBP5.04□□□□□ -1.6
SLX9YGR081C PEX13P80667 386 aa5.04□□□□□ -1.6
SLX9YGR081C ADI1Q03677 179 aa5.04□□□□□ -1.6
SLX9YGR081C SQT1P35184 431 aa5.03□□□□□ -1.6
SLX9YGR081C PEX28P38848 579 aa5.03□□□□□ -1.6
SLX9YGR081C FYV10P40492 516 aa5.03□□□□□ -1.6
SLX9YGR081C MSH4P40965 878 aaPredicted RBP5.03□□□□□ -1.6
SLX9YGR081C YGR045CP53229 120 aa5.03□□□□□ -1.6
SLX9YGR081C YGR130CP53278 816 aa5.03□□□□□ -1.6
SLX9YGR081C UTP5Q04177 643 aaKnown RBP5.03□□□□□ -1.6
SLX9YGR081C HEM13P11353 328 aaKnown RBP5.02□□□□□ -1.61
SLX9YGR081C SEC23P15303 768 aaKnown RBP5.02□□□□□ -1.61
SLX9YGR081C RDH54P38086 958 aa5.02□□□□□ -1.61
SLX9YGR081C MGE1P38523 228 aa5.02□□□□□ -1.61
SLX9YGR081C PIC2P40035 300 aa5.02□□□□□ -1.61
SLX9YGR081C SPO74P45819 413 aa5.02□□□□□ -1.61
SLX9YGR081C MTR4P47047 1073 aaKnown RBP5.02□□□□□ -1.61
SLX9YGR081C INP52P50942 1183 aa5.02□□□□□ -1.61
SLX9YGR081C YGL140CP53120 1219 aa5.02□□□□□ -1.61
SLX9YGR081C MED7Q08278 222 aa5.02□□□□□ -1.61
SLX9YGR081C CYC8P14922 966 aa5.01□□□□□ -1.61
SLX9YGR081C MSB1P21339 1137 aaKnown RBP5.01□□□□□ -1.61
SLX9YGR081C VMA4P22203 233 aaKnown RBP5.01□□□□□ -1.61
SLX9YGR081C MCM2P29469 868 aa5.01□□□□□ -1.61
SLX9YGR081C WHI3P34761 661 aaKnown RBP5.01□□□□□ -1.61
SLX9YGR081C TOS1P38288 455 aa5.01□□□□□ -1.61
SLX9YGR081C MMM1P41800 426 aa5.01□□□□□ -1.61
SLX9YGR081C XKS1P42826 600 aa5.01□□□□□ -1.61
SLX9YGR081C ALT1P52893 592 aa5.01□□□□□ -1.61
SLX9YGR081C ELA1P53861 379 aaPredicted RBP5.01□□□□□ -1.61
SLX9YGR081C SCP160P06105 1222 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SLX9YGR081C ASF1P32447 279 aa5□□□□□ -1.61
SLX9YGR081C SMY2P32909 740 aaKnown RBP5□□□□□ -1.61
SLX9YGR081C OMA1P36163 345 aa5□□□□□ -1.61
SLX9YGR081C RPS26AP39938 119 aaKnown RBP5□□□□□ -1.61
SLX9YGR081C RPS26BP39939 119 aaKnown RBP5□□□□□ -1.61
SLX9YGR081C SPR28Q04921 423 aa5□□□□□ -1.61
SLX9YGR081C AVO1Q08236 1176 aa5□□□□□ -1.61
SLX9YGR081C MCD1Q12158 566 aa5□□□□□ -1.61
SLX9YGR081C CYC7P00045 113 aa4.99□□□□□ -1.61
SLX9YGR081C RAD2P07276 1031 aa4.99□□□□□ -1.61
SLX9YGR081C RPS4AP0CX35 261 aaKnown RBP4.99□□□□□ -1.61
SLX9YGR081C RPS4BP0CX36 261 aaKnown RBP4.99□□□□□ -1.61
SLX9YGR081C PRE9P23638 258 aaKnown RBP4.99□□□□□ -1.61
SLX9YGR081C MAC1P35192 417 aa4.99□□□□□ -1.61
SLX9YGR081C YAR028WP39548 234 aa4.99□□□□□ -1.61
SLX9YGR081C CIT3P43635 486 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms