RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W SUP35P05453 685 aaKnown RBP7.11□□□□□ -1.27
RPN11YFR004W TIF1P10081 395 aaKnown RBP7.11□□□□□ -1.27
RPN11YFR004W DLD1P32891 587 aa7.11□□□□□ -1.27
RPN11YFR004W VPS24P36095 224 aaKnown RBP7.11□□□□□ -1.27
RPN11YFR004W ORC6P38826 435 aa7.11□□□□□ -1.27
RPN11YFR004W YFH7P43591 353 aa7.11□□□□□ -1.27
RPN11YFR004W PUS6P53294 404 aa7.11□□□□□ -1.27
RPN11YFR004W RAD54P32863 898 aa7.1□□□□□ -1.27
RPN11YFR004W TTI1P36097 1038 aa7.1□□□□□ -1.27
RPN11YFR004W BRN1P38170 754 aa7.1□□□□□ -1.27
RPN11YFR004W BDP1P46678 594 aa7.1□□□□□ -1.27
RPN11YFR004W VPS62P53285 467 aa7.1□□□□□ -1.27
RPN11YFR004W EAR1Q03212 550 aa7.1□□□□□ -1.27
RPN11YFR004W IXR1P33417 597 aa7.09□□□□□ -1.27
RPN11YFR004W LDH1P38139 375 aa7.09□□□□□ -1.27
RPN11YFR004W UBP12P39538 1254 aa7.09□□□□□ -1.27
RPN11YFR004W GCR2Q01722 534 aa7.09□□□□□ -1.27
RPN11YFR004W SNU66Q12420 587 aaPredicted RBP7.09□□□□□ -1.27
RPN11YFR004W SRS2P12954 1174 aa7.08□□□□□ -1.28
RPN11YFR004W MSP1P28737 362 aa7.08□□□□□ -1.28
RPN11YFR004W BIO2P32451 375 aa7.08□□□□□ -1.28
RPN11YFR004W RPT3P33298 428 aaKnown RBP7.08□□□□□ -1.28
RPN11YFR004W HXT13P39924 564 aa7.08□□□□□ -1.28
RPN11YFR004W SLN1P39928 1220 aaPredicted RBP7.08□□□□□ -1.28
RPN11YFR004W BOI2P39969 1040 aa7.08□□□□□ -1.28
RPN11YFR004W HXT10P43581 546 aa7.08□□□□□ -1.28
RPN11YFR004W APL6P46682 809 aa7.08□□□□□ -1.28
RPN11YFR004W ATG1P53104 897 aa7.08□□□□□ -1.28
RPN11YFR004W TY3A-GQ12173 290 aa7.08□□□□□ -1.28
RPN11YFR004W TY3A-IQ99219 290 aa7.08□□□□□ -1.28
RPN11YFR004W PMA1P05030 918 aaKnown RBP7.07□□□□□ -1.28
RPN11YFR004W SNF3P10870 884 aa7.07□□□□□ -1.28
RPN11YFR004W ADP1P25371 1049 aa7.07□□□□□ -1.28
RPN11YFR004W GCD7P32502 381 aaPredicted RBP7.07□□□□□ -1.28
RPN11YFR004W OCT1P35999 772 aa7.07□□□□□ -1.28
RPN11YFR004W HXT17P53631 564 aa7.07□□□□□ -1.28
RPN11YFR004W ELP4Q02884 456 aaKnown RBP7.07□□□□□ -1.28
RPN11YFR004W ECM30Q06673 1274 aa7.07□□□□□ -1.28
RPN11YFR004W NOB1Q08444 459 aaKnown RBP7.07□□□□□ -1.28
RPN11YFR004W CDC60P26637 1090 aaKnown RBP7.06□□□□□ -1.28
RPN11YFR004W WHI3P34761 661 aaKnown RBP7.06□□□□□ -1.28
RPN11YFR004W FIR1P40020 876 aa7.06□□□□□ -1.28
RPN11YFR004W RMD1Q03441 430 aa7.06□□□□□ -1.28
RPN11YFR004W CFT2Q12102 859 aaPredicted RBP7.06□□□□□ -1.28
RPN11YFR004W LSP1Q12230 341 aaKnown RBP7.06□□□□□ -1.28
RPN11YFR004W AIM44Q99299 758 aa7.06□□□□□ -1.28
RPN11YFR004W RPP1BP10622 106 aaKnown RBP7.05□□□□□ -1.28
RPN11YFR004W RGR1P19263 1082 aa7.05□□□□□ -1.28
RPN11YFR004W YDJ1P25491 409 aaKnown RBP7.05□□□□□ -1.28
RPN11YFR004W YBL036CP38197 257 aa7.05□□□□□ -1.28
RPN11YFR004W GLO3P38682 493 aaKnown RBP7.05□□□□□ -1.28
RPN11YFR004W YGL081WP53156 320 aa7.05□□□□□ -1.28
RPN11YFR004W ICL2Q12031 575 aa7.05□□□□□ -1.28
RPN11YFR004W VAS1P07806 1104 aaKnown RBP7.04□□□□□ -1.28
RPN11YFR004W CDC16P09798 840 aa7.04□□□□□ -1.28
RPN11YFR004W MCD4P36051 919 aa7.04□□□□□ -1.28
RPN11YFR004W ARL1P38116 183 aaKnown RBP7.04□□□□□ -1.28
RPN11YFR004W ACA1P39970 489 aa7.04□□□□□ -1.28
RPN11YFR004W RPL34BP40525 121 aaKnown RBP7.04□□□□□ -1.28
RPN11YFR004W CHL1P22516 861 aaPredicted RBP7.03□□□□□ -1.28
RPN11YFR004W PRE3P38624 215 aa7.03□□□□□ -1.28
RPN11YFR004W VAB2P40003 282 aa7.03□□□□□ -1.28
RPN11YFR004W AIM21P40563 679 aa7.03□□□□□ -1.28
RPN11YFR004W LYS14P40971 790 aa7.03□□□□□ -1.28
RPN11YFR004W YFL040WP43562 540 aa7.03□□□□□ -1.28
RPN11YFR004W NPA3P47122 385 aa7.03□□□□□ -1.28
RPN11YFR004W TUB2P02557 457 aaKnown RBP7.02□□□□□ -1.29
RPN11YFR004W PTK1P36002 662 aaPredicted RBP7.02□□□□□ -1.29
RPN11YFR004W VPS20Q04272 221 aa7.02□□□□□ -1.29
RPN11YFR004W MPC54Q08550 464 aa7.02□□□□□ -1.29
RPN11YFR004W PCL8Q08966 492 aa7.02□□□□□ -1.29
RPN11YFR004W RNR2P09938 399 aaKnown RBP7.01□□□□□ -1.29
RPN11YFR004W SLA1P32790 1244 aa7.01□□□□□ -1.29
RPN11YFR004W YIR042CP40586 236 aa7.01□□□□□ -1.29
RPN11YFR004W MSH4P40965 878 aaPredicted RBP7.01□□□□□ -1.29
RPN11YFR004W ARH1P48360 493 aa7.01□□□□□ -1.29
RPN11YFR004W HST2P53686 357 aa7.01□□□□□ -1.29
RPN11YFR004W NSG2P53898 299 aa7.01□□□□□ -1.29
RPN11YFR004W FMP30Q02883 468 aa7.01□□□□□ -1.29
RPN11YFR004W YPL034WQ03083 165 aa7.01□□□□□ -1.29
RPN11YFR004W PDR18P53756 1333 aa7.01□□□□□ -1.29
RPN11YFR004W YMR084WA2P2R3 262 aa7□□□□□ -1.29
RPN11YFR004W SUP45P12385 437 aaKnown RBP7□□□□□ -1.29
RPN11YFR004W KNS1P32350 737 aaPredicted RBP7□□□□□ -1.29
RPN11YFR004W CDC3P32457 520 aaKnown RBP7□□□□□ -1.29
RPN11YFR004W YBL028CP38202 106 aa7□□□□□ -1.29
RPN11YFR004W MVP1P40959 511 aaKnown RBP7□□□□□ -1.29
RPN11YFR004W KRI1P42846 591 aaKnown RBP7□□□□□ -1.29
RPN11YFR004W NMA111P53920 997 aa7□□□□□ -1.29
RPN11YFR004W NIS1P53939 407 aa7□□□□□ -1.29
RPN11YFR004W INM2Q05533 292 aa7□□□□□ -1.29
RPN11YFR004W CDC73Q06697 393 aa7□□□□□ -1.29
RPN11YFR004W YOR131CQ12486 218 aa7□□□□□ -1.29
RPN11YFR004W NCB2Q92317 146 aa7□□□□□ -1.29
RPN11YFR004W TRL1P09880 827 aaKnown RBP6.99□□□□□ -1.29
RPN11YFR004W SEC18P18759 758 aaKnown RBP6.99□□□□□ -1.29
RPN11YFR004W CLB5P30283 435 aa6.99□□□□□ -1.29
RPN11YFR004W MDL2P33311 773 aa6.99□□□□□ -1.29
RPN11YFR004W SLD2P34252 453 aa6.99□□□□□ -1.29
RPN11YFR004W UIP5P36137 443 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms