RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W UTP10P42945 1769 aaKnown RBP1.95□□□□□ -2.1
SXM1YDR395W PTK2P47116 818 aaKnown RBP1.95□□□□□ -2.1
SXM1YDR395W NOP7P53261 605 aaKnown RBP1.95□□□□□ -2.1
SXM1YDR395W SEN54Q02825 467 aaPredicted RBP1.95□□□□□ -2.1
SXM1YDR395W VPS72Q03388 795 aa1.95□□□□□ -2.1
SXM1YDR395W TLG2Q08144 397 aa1.95□□□□□ -2.1
SXM1YDR395W SLM3Q12093 417 aa1.95□□□□□ -2.1
SXM1YDR395W DIT2P21595 489 aa1.95□□□□□ -2.1
SXM1YDR395W UIP5P36137 443 aa1.95□□□□□ -2.1
SXM1YDR395W POA1P38218 177 aa1.95□□□□□ -2.1
SXM1YDR395W ERG7P38604 731 aa1.95□□□□□ -2.1
SXM1YDR395W YOR097CQ12274 175 aaPredicted RBP1.95□□□□□ -2.1
SXM1YDR395W PAT1P25644 796 aaKnown RBP1.95□□□□□ -2.1
SXM1YDR395W TRK2P28584 889 aa1.95□□□□□ -2.1
SXM1YDR395W SSF1P38789 453 aaPredicted RBP1.95□□□□□ -2.1
SXM1YDR395W JHD1P40034 492 aa1.95□□□□□ -2.1
SXM1YDR395W SUB1P54000 292 aaKnown RBP1.95□□□□□ -2.1
SXM1YDR395W TOR2P32600 2474 aaKnown RBP1.94□□□□□ -2.1
SXM1YDR395W SCJ1P25303 377 aa1.94□□□□□ -2.1
SXM1YDR395W BRN1P38170 754 aa1.94□□□□□ -2.1
SXM1YDR395W SBE2P42223 864 aaKnown RBP1.94□□□□□ -2.1
SXM1YDR395W NET1P47035 1189 aa1.94□□□□□ -2.1
SXM1YDR395W YJL045WP47052 634 aa1.94□□□□□ -2.1
SXM1YDR395W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
SXM1YDR395W ROM1P53046 1155 aa1.94□□□□□ -2.1
SXM1YDR395W YPR097WQ06839 1073 aa1.94□□□□□ -2.1
SXM1YDR395W TOA1P32773 286 aa1.94□□□□□ -2.1
SXM1YDR395W NMD3P38861 518 aaKnown RBP1.94□□□□□ -2.1
SXM1YDR395W HST3P53687 447 aa1.94□□□□□ -2.1
SXM1YDR395W GUA1P38625 525 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W SYH1Q02875 849 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W PIN2Q12057 282 aa1.93□□□□□ -2.1
SXM1YDR395W GPR1Q12361 961 aa1.93□□□□□ -2.1
SXM1YDR395W TRP2P00899 507 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W SPT2P06843 333 aaPredicted RBP1.93□□□□□ -2.1
SXM1YDR395W CLB5P30283 435 aa1.93□□□□□ -2.1
SXM1YDR395W SER1P33330 395 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W GLY1P37303 387 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W BOI1P38041 980 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W ARP1P38696 384 aa1.93□□□□□ -2.1
SXM1YDR395W HGH1P48362 394 aaKnown RBP1.93□□□□□ -2.1
SXM1YDR395W RPA14P50106 137 aa1.93□□□□□ -2.1
SXM1YDR395W MTC5Q03897 1148 aa1.93□□□□□ -2.1
SXM1YDR395W SPB4P25808 606 aaPredicted RBP1.92□□□□□ -2.1
SXM1YDR395W RRN6P32786 894 aa1.92□□□□□ -2.1
SXM1YDR395W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SXM1YDR395W MAF1P41910 395 aa1.92□□□□□ -2.1
SXM1YDR395W PSH1Q12161 406 aa1.92□□□□□ -2.1
SXM1YDR395W YDL206WQ12424 762 aa1.92□□□□□ -2.1
SXM1YDR395W GBP2P25555 427 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SXM1YDR395W VAC17P25591 423 aa1.92□□□□□ -2.1
SXM1YDR395W ISW1P38144 1129 aa1.92□□□□□ -2.1
SXM1YDR395W YFL066CP43538 392 aa1.92□□□□□ -2.1
SXM1YDR395W RTS3P53289 263 aa1.92□□□□□ -2.1
SXM1YDR395W YAF9P53930 226 aa1.92□□□□□ -2.1
SXM1YDR395W TRM1P15565 570 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W KTR1P27810 393 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W FRD1P32614 470 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W EBP2P36049 427 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W YPT35P38815 214 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W NAB3P38996 802 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SXM1YDR395W PTI1P39927 425 aaPredicted RBP1.91□□□□□ -2.1
SXM1YDR395W NUP85P46673 744 aa1.91□□□□□ -2.1
SXM1YDR395W TEA1P47988 759 aa1.91□□□□□ -2.1
SXM1YDR395W PRP43P53131 767 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W YNR061CP53747 219 aa1.91□□□□□ -2.1
SXM1YDR395W NAM8Q00539 523 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W UBX2Q04228 584 aa1.91□□□□□ -2.1
SXM1YDR395W FPR4Q06205 392 aaPredicted RBP1.91□□□□□ -2.1
SXM1YDR395W HEM3P28789 327 aa1.91□□□□□ -2.1
SXM1YDR395W SMY1P32364 656 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W SEG2P34250 1132 aa1.91□□□□□ -2.1
SXM1YDR395W MDJ1P35191 511 aa1.91□□□□□ -2.1
SXM1YDR395W NMD2P38798 1089 aaKnown RBP1.91□□□□□ -2.1
SXM1YDR395W CSL4P53859 292 aaPredicted RBP1.91□□□□□ -2.1
SXM1YDR395W UBX5Q06682 500 aa1.91□□□□□ -2.1
SXM1YDR395W SLY41P22215 453 aa1.9□□□□□ -2.1
SXM1YDR395W PCA1P38360 1216 aa1.9□□□□□ -2.1
SXM1YDR395W YJR008WP47085 338 aa1.9□□□□□ -2.1
SXM1YDR395W HST2P53686 357 aa1.9□□□□□ -2.1
SXM1YDR395W RRP15Q06511 250 aaPredicted RBP1.9□□□□□ -2.1
SXM1YDR395W BUD21Q08492 214 aaPredicted RBP1.9□□□□□ -2.1
SXM1YDR395W SSM4P40318 1319 aa1.9□□□□□ -2.1
SXM1YDR395W IMG2P25642 146 aaPredicted RBP1.9□□□□□ -2.11
SXM1YDR395W ICL1P28240 557 aaPredicted RBP1.9□□□□□ -2.11
SXM1YDR395W SFP1P32432 683 aa1.9□□□□□ -2.11
SXM1YDR395W FMO1P38866 432 aa1.9□□□□□ -2.11
SXM1YDR395W AAD14P42884 376 aa1.9□□□□□ -2.11
SXM1YDR395W YJR098CP47139 656 aa1.9□□□□□ -2.11
SXM1YDR395W KXD1P53158 218 aa1.9□□□□□ -2.11
SXM1YDR395W TY1A-MR1Q04215 440 aa1.9□□□□□ -2.11
SXM1YDR395W BRE1Q07457 700 aaKnown RBP1.9□□□□□ -2.11
SXM1YDR395W YML133CQ03099 1374 aa1.9□□□□□ -2.11
SXM1YDR395W SLD2P34252 453 aa1.9□□□□□ -2.11
SXM1YDR395W CSM2P40465 213 aa1.9□□□□□ -2.11
SXM1YDR395W ROG3P43602 733 aa1.9□□□□□ -2.11
SXM1YDR395W WHI4Q07655 649 aaKnown RBP1.9□□□□□ -2.11
SXM1YDR395W GAS5Q08193 484 aa1.9□□□□□ -2.11
SXM1YDR395W UGA3P26370 528 aa1.89□□□□□ -2.11
SXM1YDR395W YJU3P28321 313 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms