RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C HDA3Q06623 655 aa2.61□□□□□ -1.99
SSD1YDR293C ELM1P32801 640 aa2.61□□□□□ -1.99
SSD1YDR293C RMT2Q03305 412 aa2.61□□□□□ -1.99
SSD1YDR293C CLF1Q12309 687 aaPredicted RBP2.61□□□□□ -1.99
SSD1YDR293C MRP7P12687 371 aa2.6□□□□□ -1.99
SSD1YDR293C OPI1P21957 404 aa2.6□□□□□ -1.99
SSD1YDR293C MSP1P28737 362 aa2.6□□□□□ -1.99
SSD1YDR293C PET112P33893 541 aa2.6□□□□□ -1.99
SSD1YDR293C RSC30P38781 883 aa2.6□□□□□ -1.99
SSD1YDR293C AIM9P40053 627 aaKnown RBP2.6□□□□□ -1.99
SSD1YDR293C ATG36P46983 293 aa2.6□□□□□ -1.99
SSD1YDR293C CWH41P53008 833 aa2.6□□□□□ -1.99
SSD1YDR293C GCR2Q01722 534 aa2.6□□□□□ -1.99
SSD1YDR293C SRT1Q03175 343 aa2.6□□□□□ -1.99
SSD1YDR293C FAL1Q12099 399 aaKnown RBP2.6□□□□□ -1.99
SSD1YDR293C PHM7Q12252 991 aa2.6□□□□□ -1.99
SSD1YDR293C RAM1P22007 431 aa2.6□□□□□ -1.99
SSD1YDR293C PRE9P23638 258 aaKnown RBP2.6□□□□□ -1.99
SSD1YDR293C PHO87P25360 923 aa2.6□□□□□ -1.99
SSD1YDR293C TCD1P38756 429 aa2.6□□□□□ -1.99
SSD1YDR293C DAK2P43550 591 aa2.6□□□□□ -1.99
SSD1YDR293C YJR142WP47173 342 aa2.6□□□□□ -1.99
SSD1YDR293C RRP46P53256 223 aaPredicted RBP2.6□□□□□ -1.99
SSD1YDR293C TFB4Q12004 338 aa2.6□□□□□ -1.99
SSD1YDR293C SSF2Q12153 453 aaPredicted RBP2.6□□□□□ -1.99
SSD1YDR293C ERR1P0CX10 437 aa2.6□□□□□ -1.99
SSD1YDR293C ERR2P0CX11 437 aa2.6□□□□□ -1.99
SSD1YDR293C PCT1P13259 424 aa2.6□□□□□ -1.99
SSD1YDR293C NMD2P38798 1089 aaKnown RBP2.6□□□□□ -1.99
SSD1YDR293C RRT14P40470 206 aa2.6□□□□□ -1.99
SSD1YDR293C DAL4Q04895 635 aa2.6□□□□□ -1.99
SSD1YDR293C DPL1Q05567 589 aa2.6□□□□□ -1.99
SSD1YDR293C YDR306CQ06640 478 aa2.6□□□□□ -1.99
SSD1YDR293C RTT109Q07794 436 aa2.6□□□□□ -1.99
SSD1YDR293C BMS1Q08965 1183 aaKnown RBP2.6□□□□□ -1.99
SSD1YDR293C YBL029C-AQ3E756 94 aa2.6□□□□□ -1.99
SSD1YDR293C SAC3P46674 1301 aa2.6□□□□□ -1.99
SSD1YDR293C TRP5P00931 707 aaKnown RBP2.59□□□□□ -1.99
SSD1YDR293C MPH3P0CE00 602 aa2.59□□□□□ -1.99
SSD1YDR293C RPS24AP0CX31 135 aaKnown RBP2.59□□□□□ -1.99
SSD1YDR293C RPS24BP0CX32 135 aaKnown RBP2.59□□□□□ -1.99
SSD1YDR293C HAP4P14064 554 aa2.59□□□□□ -1.99
SSD1YDR293C SIT4P20604 311 aa2.59□□□□□ -1.99
SSD1YDR293C YHL017WP38745 532 aa2.59□□□□□ -1.99
SSD1YDR293C POB3Q04636 552 aaKnown RBP2.59□□□□□ -1.99
SSD1YDR293C TRS33Q99394 268 aa2.59□□□□□ -1.99
SSD1YDR293C SRS2P12954 1174 aa2.59□□□□□ -1.99
SSD1YDR293C SPT5P27692 1063 aaKnown RBP2.59□□□□□ -1.99
SSD1YDR293C YDR344CQ05510 147 aa2.59□□□□□ -1.99
SSD1YDR293C TOS4Q06266 489 aa2.59□□□□□ -1.99
SSD1YDR293C RRP15Q06511 250 aaPredicted RBP2.59□□□□□ -1.99
SSD1YDR293C ALR1Q08269 859 aa2.59□□□□□ -1.99
SSD1YDR293C RIM15P43565 1770 aa2.59□□□□□ -2
SSD1YDR293C BIK1P11709 440 aa2.59□□□□□ -2
SSD1YDR293C IXR1P33417 597 aa2.59□□□□□ -2
SSD1YDR293C ARL1P38116 183 aaKnown RBP2.59□□□□□ -2
SSD1YDR293C FPR4Q06205 392 aaPredicted RBP2.59□□□□□ -2
SSD1YDR293C HIM1Q06674 414 aa2.59□□□□□ -2
SSD1YDR293C TSC13Q99190 310 aa2.59□□□□□ -2
SSD1YDR293C NUP145P49687 1317 aa2.59□□□□□ -2
SSD1YDR293C SUB1P54000 292 aaKnown RBP2.58□□□□□ -2
SSD1YDR293C ATG13Q06628 738 aa2.58□□□□□ -2
SSD1YDR293C NOP58Q12499 511 aaKnown RBP2.58□□□□□ -2
SSD1YDR293C UGA4P32837 571 aa2.58□□□□□ -2
SSD1YDR293C MPE1P35728 441 aaKnown RBP2.58□□□□□ -2
SSD1YDR293C RFT1P38206 574 aaPredicted RBP2.58□□□□□ -2
SSD1YDR293C ECM2P38241 364 aaKnown RBP2.58□□□□□ -2
SSD1YDR293C CRP1P38845 465 aaKnown RBP2.58□□□□□ -2
SSD1YDR293C BOI2P39969 1040 aa2.58□□□□□ -2
SSD1YDR293C ULI1P43604 169 aa2.58□□□□□ -2
SSD1YDR293C ALG2P43636 503 aa2.58□□□□□ -2
SSD1YDR293C YGR125WP53273 1036 aa2.58□□□□□ -2
SSD1YDR293C FOL1P53848 824 aa2.58□□□□□ -2
SSD1YDR293C LCD1Q04377 747 aa2.58□□□□□ -2
SSD1YDR293C NYV1Q12255 253 aa2.58□□□□□ -2
SSD1YDR293C BUB1P41695 1021 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
SSD1YDR293C XKS1P42826 600 aa2.58□□□□□ -2
SSD1YDR293C DAS1P47005 663 aa2.58□□□□□ -2
SSD1YDR293C ATG1P53104 897 aa2.58□□□□□ -2
SSD1YDR293C ALO1P54783 526 aaKnown RBP2.58□□□□□ -2
SSD1YDR293C VPS16Q03308 798 aa2.58□□□□□ -2
SSD1YDR293C GPI13Q07830 1017 aa2.58□□□□□ -2
SSD1YDR293C VAS1P07806 1104 aaKnown RBP2.57□□□□□ -2
SSD1YDR293C RPS6AP0CX37 236 aaKnown RBP2.57□□□□□ -2
SSD1YDR293C RPS6BP0CX38 236 aaPredicted RBP2.57□□□□□ -2
SSD1YDR293C YKL069WP36088 180 aa2.57□□□□□ -2
SSD1YDR293C RIX1P38883 763 aaPredicted RBP2.57□□□□□ -2
SSD1YDR293C FAA3P39002 694 aa2.57□□□□□ -2
SSD1YDR293C ALA1P40825 983 aaKnown RBP2.57□□□□□ -2
SSD1YDR293C STU2P46675 888 aa2.57□□□□□ -2
SSD1YDR293C KXD1P53158 218 aa2.57□□□□□ -2
SSD1YDR293C FRK1Q03002 865 aaPredicted RBP2.57□□□□□ -2
SSD1YDR293C NKP2Q06162 153 aa2.57□□□□□ -2
SSD1YDR293C ATG20Q07528 640 aa2.57□□□□□ -2
SSD1YDR293C FIG2P25653 1609 aa2.57□□□□□ -2
SSD1YDR293C CYB2P00175 591 aa2.57□□□□□ -2
SSD1YDR293C PHO8P11491 566 aa2.57□□□□□ -2
SSD1YDR293C PGI1P12709 554 aaKnown RBP2.57□□□□□ -2
SSD1YDR293C SFP1P32432 683 aa2.57□□□□□ -2
SSD1YDR293C PRP40P33203 583 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms