RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W GAS5Q08193 484 aa5.94□□□□□ -1.46
HSP42YDR171W TY1A-LR4P0C2I8 440 aaKnown RBP5.93□□□□□ -1.46
HSP42YDR171W TY1A-DR6P0CX70 440 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-ER1P0CX71 440 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-LR2P0CX72 440 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-PLP0CX73 440 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-JR1P0CX74 440 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-LR3P0CX75 440 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-ML2P0CX76 440 aa5.93□□□□□ -1.46
HSP42YDR171W PRE9P23638 258 aaKnown RBP5.93□□□□□ -1.46
HSP42YDR171W PAM1P37304 830 aaKnown RBP5.93□□□□□ -1.46
HSP42YDR171W PIC2P40035 300 aa5.93□□□□□ -1.46
HSP42YDR171W ESF1Q06344 628 aaKnown RBP5.93□□□□□ -1.46
HSP42YDR171W TY1A-GR1Q12085 440 aa5.93□□□□□ -1.46
HSP42YDR171W MCD1Q12158 566 aa5.93□□□□□ -1.46
HSP42YDR171W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.93□□□□□ -1.46
HSP42YDR171W TY1A-OLQ92392 440 aaKnown RBP5.93□□□□□ -1.46
HSP42YDR171W ERS1P17261 260 aa5.92□□□□□ -1.46
HSP42YDR171W MSH3P25336 1018 aa5.92□□□□□ -1.46
HSP42YDR171W PEX28P38848 579 aa5.92□□□□□ -1.46
HSP42YDR171W YIG1Q08956 461 aa5.92□□□□□ -1.46
HSP42YDR171W ELG1Q12050 791 aa5.92□□□□□ -1.46
HSP42YDR171W YKL077WP36081 392 aa5.91□□□□□ -1.46
HSP42YDR171W EXO5P38289 585 aa5.91□□□□□ -1.46
HSP42YDR171W PRY1P47032 299 aa5.91□□□□□ -1.46
HSP42YDR171W UTP22P53254 1237 aaPredicted RBP5.91□□□□□ -1.46
HSP42YDR171W NOG1Q02892 647 aaKnown RBP5.91□□□□□ -1.46
HSP42YDR171W YMR074CQ04773 145 aa5.91□□□□□ -1.46
HSP42YDR171W JIP5Q06214 492 aaPredicted RBP5.91□□□□□ -1.46
HSP42YDR171W MAE1P36013 669 aaKnown RBP5.9□□□□□ -1.46
HSP42YDR171W MCX1P38323 520 aaPredicted RBP5.9□□□□□ -1.46
HSP42YDR171W SHU2P38957 223 aa5.9□□□□□ -1.46
HSP42YDR171W BUD9P53226 547 aa5.9□□□□□ -1.46
HSP42YDR171W NOP7P53261 605 aaKnown RBP5.9□□□□□ -1.46
HSP42YDR171W DSE4P53753 1117 aa5.9□□□□□ -1.46
HSP42YDR171W XKS1P42826 600 aa5.89□□□□□ -1.47
HSP42YDR171W YMR187CQ03236 431 aa5.89□□□□□ -1.47
HSP42YDR171W ALG6Q12001 544 aaKnown RBP5.89□□□□□ -1.47
HSP42YDR171W PET112P33893 541 aa5.88□□□□□ -1.47
HSP42YDR171W SLN1P39928 1220 aaPredicted RBP5.88□□□□□ -1.47
HSP42YDR171W SLS1P42900 643 aa5.88□□□□□ -1.47
HSP42YDR171W KIP3P53086 805 aaKnown RBP5.88□□□□□ -1.47
HSP42YDR171W YGL140CP53120 1219 aa5.88□□□□□ -1.47
HSP42YDR171W RMD1Q03441 430 aa5.88□□□□□ -1.47
HSP42YDR171W YDR215CQ12240 137 aa5.88□□□□□ -1.47
HSP42YDR171W TY1A-NL1Q12391 440 aaKnown RBP5.88□□□□□ -1.47
HSP42YDR171W HEM13P11353 328 aaKnown RBP5.87□□□□□ -1.47
HSP42YDR171W YCK2P23292 546 aaKnown RBP5.87□□□□□ -1.47
HSP42YDR171W REI1P38344 393 aaPredicted RBP5.87□□□□□ -1.47
HSP42YDR171W NEM1P38757 446 aa5.87□□□□□ -1.47
HSP42YDR171W GCV1P48015 400 aa5.87□□□□□ -1.47
HSP42YDR171W FAR11P53917 953 aa5.87□□□□□ -1.47
HSP42YDR171W MEC3Q02574 474 aa5.87□□□□□ -1.47
HSP42YDR171W MRL1Q06815 381 aa5.87□□□□□ -1.47
HSP42YDR171W PHM7Q12252 991 aa5.87□□□□□ -1.47
HSP42YDR171W YPR053CQ6Q5F3 151 aa5.87□□□□□ -1.47
HSP42YDR171W MET10P39692 1035 aa5.86□□□□□ -1.47
HSP42YDR171W AI3P03877 415 aa5.85□□□□□ -1.47
HSP42YDR171W DED1P06634 604 aaKnown RBP5.85□□□□□ -1.47
HSP42YDR171W GCR1P07261 785 aa5.85□□□□□ -1.47
HSP42YDR171W SEC23P15303 768 aaKnown RBP5.85□□□□□ -1.47
HSP42YDR171W ICP55P40051 511 aa5.85□□□□□ -1.47
HSP42YDR171W SVF1Q05515 481 aa5.85□□□□□ -1.47
HSP42YDR171W REC8Q12188 680 aa5.85□□□□□ -1.47
HSP42YDR171W SFA1P32771 386 aa5.84□□□□□ -1.47
HSP42YDR171W TAT1P38085 619 aa5.84□□□□□ -1.47
HSP42YDR171W MAD1P40957 749 aa5.84□□□□□ -1.47
HSP42YDR171W SPO74P45819 413 aa5.84□□□□□ -1.47
HSP42YDR171W MTR4P47047 1073 aaKnown RBP5.84□□□□□ -1.47
HSP42YDR171W UTP5Q04177 643 aaKnown RBP5.84□□□□□ -1.47
HSP42YDR171W HDA2Q06629 674 aa5.84□□□□□ -1.47
HSP42YDR171W MCA1Q08601 432 aa5.84□□□□□ -1.47
HSP42YDR171W YOR223WQ12015 292 aa5.84□□□□□ -1.47
HSP42YDR171W PUS1Q12211 544 aaKnown RBP5.84□□□□□ -1.47
HSP42YDR171W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
HSP42YDR171W VMA4P22203 233 aaKnown RBP5.83□□□□□ -1.48
HSP42YDR171W RDH54P38086 958 aa5.83□□□□□ -1.48
HSP42YDR171W NCE103P53615 221 aa5.83□□□□□ -1.48
HSP42YDR171W YNR063WP53749 607 aa5.83□□□□□ -1.48
HSP42YDR171W DOT1Q04089 582 aaKnown RBP5.83□□□□□ -1.48
HSP42YDR171W YLL054CQ12244 843 aa5.83□□□□□ -1.48
HSP42YDR171W TCB3Q03640 1545 aaKnown RBP5.83□□□□□ -1.48
HSP42YDR171W RSC6P25632 483 aa5.81□□□□□ -1.48
HSP42YDR171W ARL1P38116 183 aaKnown RBP5.81□□□□□ -1.48
HSP42YDR171W ATG14P38270 344 aa5.81□□□□□ -1.48
HSP42YDR171W SKN7P38889 622 aa5.81□□□□□ -1.48
HSP42YDR171W GNP1P48813 663 aa5.81□□□□□ -1.48
HSP42YDR171W ELA1P53861 379 aaPredicted RBP5.81□□□□□ -1.48
HSP42YDR171W ROD1Q02805 837 aa5.81□□□□□ -1.48
HSP42YDR171W VPS16Q03308 798 aa5.81□□□□□ -1.48
HSP42YDR171W EST2Q06163 884 aa5.81□□□□□ -1.48
HSP42YDR171W MAG2Q06436 670 aaKnown RBP5.81□□□□□ -1.48
HSP42YDR171W AVO1Q08236 1176 aa5.81□□□□□ -1.48
HSP42YDR171W CLN2P20438 545 aa5.8□□□□□ -1.48
HSP42YDR171W DUT1P33317 147 aa5.8□□□□□ -1.48
HSP42YDR171W MNR2P35724 969 aa5.8□□□□□ -1.48
HSP42YDR171W GPT2P36148 743 aa5.8□□□□□ -1.48
HSP42YDR171W AKR1P39010 764 aa5.8□□□□□ -1.48
HSP42YDR171W ARI1P53111 347 aaKnown RBP5.8□□□□□ -1.48
HSP42YDR171W YGR045CP53229 120 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms