RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	STE5	P32917	917 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	MON1	P53129	644 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	YGR053C	P53234	283 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	OXR1	Q08952	273 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	CAT8	P39113	1433 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	SEC7	P11075	2009 aa	Known RBP	4.24	□□□□□ -1.73
HBT1	YDL223C	CHL1	P22516	861 aa	Predicted RBP	4.24	□□□□□ -1.73
HBT1	YDL223C	CIC1	P38779	376 aa	Known RBP	4.24	□□□□□ -1.73
HBT1	YDL223C	EEB1	Q02891	456 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	MET32	Q12041	191 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	RAD4	P14736	754 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	RRP14	P36080	434 aa	Known RBP	4.24	□□□□□ -1.73
HBT1	YDL223C	ULP1	Q02724	621 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	EMG1	Q06287	252 aa	Known RBP	4.24	□□□□□ -1.73
HBT1	YDL223C	ESC2	Q06340	456 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	OPI10	Q08202	246 aa		4.24	□□□□□ -1.73
HBT1	YDL223C	HEM13	P11353	328 aa	Known RBP	4.23	□□□□□ -1.73
HBT1	YDL223C	IRS4	P36115	615 aa	Known RBP	4.23	□□□□□ -1.73
HBT1	YDL223C	SPF1	P39986	1215 aa	Known RBP	4.23	□□□□□ -1.73
HBT1	YDL223C	YCS4	Q06156	1176 aa		4.23	□□□□□ -1.73
HBT1	YDL223C	RPC31	P17890	251 aa		4.23	□□□□□ -1.73
HBT1	YDL223C	TSR4	P25040	408 aa		4.23	□□□□□ -1.73
HBT1	YDL223C	NUP82	P40368	713 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	YJR142W	P47173	342 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	GNP1	P48813	663 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	UTP4	Q06679	776 aa	Known RBP	4.22	□□□□□ -1.73
HBT1	YDL223C	ERR1	P0CX10	437 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	ERR2	P0CX11	437 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	MRPS18	P42847	217 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	JJJ2	P46997	583 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	TYW3	P53177	273 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	UBX5	Q06682	500 aa		4.22	□□□□□ -1.73
HBT1	YDL223C	CCP1	P00431	361 aa		4.21	□□□□□ -1.73
HBT1	YDL223C	SLA1	P32790	1244 aa		4.21	□□□□□ -1.73
HBT1	YDL223C	DYS1	P38791	387 aa		4.21	□□□□□ -1.73
HBT1	YDL223C	YJL049W	P47048	450 aa		4.21	□□□□□ -1.73
HBT1	YDL223C	GEA1	P47102	1408 aa	Predicted RBP	4.21	□□□□□ -1.74
HBT1	YDL223C	TDA5	Q06417	326 aa	Known RBP	4.21	□□□□□ -1.74
HBT1	YDL223C	BMT6	Q12291	365 aa		4.21	□□□□□ -1.74
HBT1	YDL223C	YSP2	Q06681	1438 aa		4.21	□□□□□ -1.74
HBT1	YDL223C	MNN1	P39106	762 aa		4.21	□□□□□ -1.74
HBT1	YDL223C	PSH1	Q12161	406 aa		4.21	□□□□□ -1.74
HBT1	YDL223C	KAP122	P32767	1081 aa		4.2	□□□□□ -1.74
HBT1	YDL223C	GRX4	P32642	244 aa		4.2	□□□□□ -1.74
HBT1	YDL223C	ALA1	P40825	983 aa	Known RBP	4.2	□□□□□ -1.74
HBT1	YDL223C	NUT1	P53114	1132 aa		4.2	□□□□□ -1.74
HBT1	YDL223C	ADI1	Q03677	179 aa		4.2	□□□□□ -1.74
HBT1	YDL223C	MCD1	Q12158	566 aa		4.2	□□□□□ -1.74
HBT1	YDL223C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
HBT1	YDL223C	MRF1	P30775	413 aa	Predicted RBP	4.19	□□□□□ -1.74
HBT1	YDL223C	PYC2	P32327	1180 aa	Known RBP	4.19	□□□□□ -1.74
HBT1	YDL223C	TIM54	P47045	478 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	YNR040W	P53736	256 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	REC8	Q12188	680 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	BAS1	P22035	811 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	DLD3	P39976	496 aa	Known RBP	4.19	□□□□□ -1.74
HBT1	YDL223C	AIR1	P40507	360 aa	Known RBP	4.19	□□□□□ -1.74
HBT1	YDL223C	ITC1	P53125	1264 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	YOR296W	Q08748	1289 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	USO1	P25386	1790 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	SEA4	P38164	1038 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	GIP1	P38229	639 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	XKS1	P42826	600 aa		4.19	□□□□□ -1.74
HBT1	YDL223C	BNR1	P40450	1375 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	PDC6	P26263	563 aa	Known RBP	4.18	□□□□□ -1.74
HBT1	YDL223C	VRP1	P37370	817 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	ISW1	P38144	1129 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	HXT13	P39924	564 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	HXT17	P53631	564 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	HXT15	P54854	567 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	IRE1	P32361	1115 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	DLD1	P32891	587 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	YBR184W	P38299	523 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	RSP5	P39940	809 aa	Known RBP	4.18	□□□□□ -1.74
HBT1	YDL223C	FIR1	P40020	876 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	YJR115W	P47152	169 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	CUS1	Q02554	436 aa	Predicted RBP	4.18	□□□□□ -1.74
HBT1	YDL223C	HED1	Q03937	162 aa		4.18	□□□□□ -1.74
HBT1	YDL223C	MET6	P05694	767 aa	Known RBP	4.17	□□□□□ -1.74
HBT1	YDL223C	YAP3	P38749	330 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	FPR3	P38911	411 aa	Known RBP	4.17	□□□□□ -1.74
HBT1	YDL223C	FLC1	Q08967	793 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	FAL1	Q12099	399 aa	Known RBP	4.17	□□□□□ -1.74
HBT1	YDL223C	ABD1	P32783	436 aa	Predicted RBP	4.17	□□□□□ -1.74
HBT1	YDL223C	MSH6	Q03834	1242 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	YOR131C	Q12486	218 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	TOM20	P35180	183 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	AIM46	P38885	310 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	YIL165C	P40446	119 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	AAD14	P42884	376 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	DNM1	P54861	757 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	NAN1	Q02931	896 aa	Known RBP	4.17	□□□□□ -1.74
HBT1	YDL223C	MRL1	Q06815	381 aa		4.17	□□□□□ -1.74
HBT1	YDL223C	PFD1	P46988	109 aa		4.16	□□□□□ -1.74
HBT1	YDL223C	MSN5	P52918	1224 aa		4.16	□□□□□ -1.74
HBT1	YDL223C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
HBT1	YDL223C	HDA2	Q06629	674 aa		4.16	□□□□□ -1.74
HBT1	YDL223C	RTT10	Q08924	1013 aa		4.16	□□□□□ -1.74
HBT1	YDL223C	OSW7	P43611	510 aa		4.16	□□□□□ -1.74
HBT1	YDL223C	SAP155	P43612	1002 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms