RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W RTR1P40084 226 aaPredicted RBP2.23□□□□□ -2.05
USO1YDL058W SEC9P40357 651 aa2.23□□□□□ -2.05
USO1YDL058W MKT1P40850 830 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W CCT7P42943 550 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W PMT3P47190 753 aa2.23□□□□□ -2.05
USO1YDL058W CWH41P53008 833 aa2.23□□□□□ -2.05
USO1YDL058W YNL144CP53907 740 aa2.23□□□□□ -2.05
USO1YDL058W GDE1Q02979 1223 aa2.23□□□□□ -2.05
USO1YDL058W CMC2Q3E7A4 109 aa2.23□□□□□ -2.05
USO1YDL058W MDS3P53094 1487 aa2.23□□□□□ -2.05
USO1YDL058W RPB4P20433 221 aaPredicted RBP2.23□□□□□ -2.05
USO1YDL058W SSH4P32343 579 aa2.23□□□□□ -2.05
USO1YDL058W MCD4P36051 919 aa2.23□□□□□ -2.05
USO1YDL058W YKL133CP36066 463 aa2.23□□□□□ -2.05
USO1YDL058W YIL166CP40445 542 aa2.23□□□□□ -2.05
USO1YDL058W YFL066CP43538 392 aa2.23□□□□□ -2.05
USO1YDL058W TOM22P49334 152 aa2.23□□□□□ -2.05
USO1YDL058W MLC2Q06580 163 aa2.23□□□□□ -2.05
USO1YDL058W SAM3Q08986 587 aa2.23□□□□□ -2.05
USO1YDL058W SEC6P32844 805 aa2.23□□□□□ -2.05
USO1YDL058W TCD1P38756 429 aa2.23□□□□□ -2.05
USO1YDL058W TMA108P40462 946 aa2.23□□□□□ -2.05
USO1YDL058W INA22P40576 216 aa2.23□□□□□ -2.05
USO1YDL058W RET2P43621 546 aa2.23□□□□□ -2.05
USO1YDL058W UTP8P53276 713 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W ENT1Q12518 454 aa2.23□□□□□ -2.05
USO1YDL058W ATG2P53855 1592 aa2.23□□□□□ -2.05
USO1YDL058W SPT6P23615 1451 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W HIR3P47171 1648 aa2.23□□□□□ -2.05
USO1YDL058W TRP5P00931 707 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W VAS1P07806 1104 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W KAR1P11927 433 aa2.23□□□□□ -2.05
USO1YDL058W GAP1P19145 602 aaPredicted RBP2.23□□□□□ -2.05
USO1YDL058W PEP12P32854 288 aa2.23□□□□□ -2.05
USO1YDL058W MDL2P33311 773 aa2.23□□□□□ -2.05
USO1YDL058W TFC3P34111 1160 aa2.23□□□□□ -2.05
USO1YDL058W KTR4P38131 464 aa2.23□□□□□ -2.05
USO1YDL058W RIM4P38741 713 aa2.23□□□□□ -2.05
USO1YDL058W YNG2P38806 282 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W NOP16P40007 231 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W TCB2P48231 1178 aa2.23□□□□□ -2.05
USO1YDL058W NUP42P49686 430 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W HST1P53685 503 aa2.23□□□□□ -2.05
USO1YDL058W HEH2Q03281 663 aa2.23□□□□□ -2.05
USO1YDL058W PPN1Q04119 674 aa2.23□□□□□ -2.05
USO1YDL058W SOV1Q04748 898 aa2.23□□□□□ -2.05
USO1YDL058W ARP9Q05123 467 aa2.23□□□□□ -2.05
USO1YDL058W SDH5Q08230 162 aa2.23□□□□□ -2.05
USO1YDL058W NCP1P16603 691 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W PRP9P19736 530 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W DBP3P20447 523 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W RAM2P29703 316 aa2.23□□□□□ -2.05
USO1YDL058W SDS22P36047 338 aa2.23□□□□□ -2.05
USO1YDL058W HSM3P38348 480 aa2.23□□□□□ -2.05
USO1YDL058W EMW1P42842 904 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W SHE4P51534 789 aa2.23□□□□□ -2.05
USO1YDL058W PEX19Q07418 342 aa2.23□□□□□ -2.05
USO1YDL058W RIX7Q07844 837 aaKnown RBP2.23□□□□□ -2.05
USO1YDL058W AVO1Q08236 1176 aa2.23□□□□□ -2.05
USO1YDL058W PEP3P27801 918 aa2.22□□□□□ -2.05
USO1YDL058W NIP1P32497 812 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W RRN6P32786 894 aa2.22□□□□□ -2.05
USO1YDL058W BEM3P32873 1128 aa2.22□□□□□ -2.05
USO1YDL058W KES1P35844 434 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W PEX18P38855 283 aa2.22□□□□□ -2.05
USO1YDL058W EMP47P43555 445 aa2.22□□□□□ -2.05
USO1YDL058W ROK1P45818 564 aaPredicted RBP2.22□□□□□ -2.05
USO1YDL058W CCM1P48237 864 aaPredicted RBP2.22□□□□□ -2.05
USO1YDL058W ZIP2P53061 704 aa2.22□□□□□ -2.05
USO1YDL058W MDG1P53885 366 aa2.22□□□□□ -2.05
USO1YDL058W MRX10Q05648 414 aa2.22□□□□□ -2.05
USO1YDL058W YLR283WQ05867 314 aa2.22□□□□□ -2.05
USO1YDL058W CEX1Q12453 761 aa2.22□□□□□ -2.05
USO1YDL058W MTF2P10849 440 aa2.22□□□□□ -2.05
USO1YDL058W PRP28P23394 588 aa2.22□□□□□ -2.05
USO1YDL058W PTP2P29461 750 aa2.22□□□□□ -2.05
USO1YDL058W ISW1P38144 1129 aa2.22□□□□□ -2.05
USO1YDL058W OLA1P38219 394 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W SLN1P39928 1220 aaPredicted RBP2.22□□□□□ -2.05
USO1YDL058W KAP123P40069 1113 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W ZDS1P50111 915 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W TUB4P53378 473 aa2.22□□□□□ -2.05
USO1YDL058W CNM67P53865 581 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W MTC5Q03897 1148 aa2.22□□□□□ -2.05
USO1YDL058W SEG1Q04279 960 aa2.22□□□□□ -2.05
USO1YDL058W COG4Q06096 861 aa2.22□□□□□ -2.05
USO1YDL058W ATG29Q12092 213 aa2.22□□□□□ -2.05
USO1YDL058W MST1P07236 462 aa2.22□□□□□ -2.05
USO1YDL058W PET18P25362 215 aa2.22□□□□□ -2.05
USO1YDL058W MCM2P29469 868 aa2.22□□□□□ -2.05
USO1YDL058W YEL043WP32618 956 aa2.22□□□□□ -2.05
USO1YDL058W SER1P33330 395 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W ARF3P40994 183 aaRIP-Chip data2.22□□□□□ -2.05not detected
USO1YDL058W CCT8P47079 568 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W VMA10P48836 114 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W NOP15P53927 220 aaPredicted RBP2.22□□□□□ -2.05
USO1YDL058W RPL34AP87262 121 aaPredicted RBP2.22□□□□□ -2.05
USO1YDL058W SLU7Q02775 382 aaKnown RBP2.22□□□□□ -2.05
USO1YDL058W MMT1Q03218 510 aa2.22□□□□□ -2.05
USO1YDL058W ATG16Q03818 150 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms