RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W GCD6P32501 712 aaKnown RBP3.8□□□□□ -1.8
SWD3YBR175W KTR2P33550 425 aa3.8□□□□□ -1.8
SWD3YBR175W PET112P33893 541 aa3.8□□□□□ -1.8
SWD3YBR175W MNN1P39106 762 aa3.8□□□□□ -1.8
SWD3YBR175W FIR1P40020 876 aa3.8□□□□□ -1.8
SWD3YBR175W YJR142WP47173 342 aa3.8□□□□□ -1.8
SWD3YBR175W ITC1P53125 1264 aa3.8□□□□□ -1.8
SWD3YBR175W MET6P05694 767 aaKnown RBP3.79□□□□□ -1.8
SWD3YBR175W RPB10P22139 70 aa3.79□□□□□ -1.8
SWD3YBR175W NAB2P32505 525 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SWD3YBR175W SMC1P32908 1225 aa3.79□□□□□ -1.8
SWD3YBR175W OMA1P36163 345 aa3.79□□□□□ -1.8
SWD3YBR175W BSD2P38356 321 aa3.79□□□□□ -1.8
SWD3YBR175W NTA1P40354 457 aa3.79□□□□□ -1.8
SWD3YBR175W TPM2P40414 161 aa3.79□□□□□ -1.8
SWD3YBR175W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SWD3YBR175W YGL081WP53156 320 aa3.79□□□□□ -1.8
SWD3YBR175W UFD2P54860 961 aa3.79□□□□□ -1.8
SWD3YBR175W GAS5Q08193 484 aa3.79□□□□□ -1.8
SWD3YBR175W YOL057WQ08225 711 aa3.79□□□□□ -1.8
SWD3YBR175W MRP10O75012 95 aa3.78□□□□□ -1.8
SWD3YBR175W CYC8P14922 966 aa3.78□□□□□ -1.8
SWD3YBR175W IDI1P15496 288 aa3.78□□□□□ -1.8
SWD3YBR175W SFA1P32771 386 aa3.78□□□□□ -1.8
SWD3YBR175W VPS35P34110 944 aa3.78□□□□□ -1.8
SWD3YBR175W MNR2P35724 969 aa3.78□□□□□ -1.8
SWD3YBR175W RRM3P38766 723 aa3.78□□□□□ -1.8
SWD3YBR175W TAT2P38967 592 aa3.78□□□□□ -1.8
SWD3YBR175W YIL165CP40446 119 aa3.78□□□□□ -1.8
SWD3YBR175W RGD2P43556 714 aa3.78□□□□□ -1.8
SWD3YBR175W SUT1P53032 299 aaKnown RBP3.78□□□□□ -1.8
SWD3YBR175W ARI1P53111 347 aaKnown RBP3.78□□□□□ -1.8
SWD3YBR175W HUL5P53119 910 aa3.78□□□□□ -1.8
SWD3YBR175W YGR122WP53272 402 aa3.78□□□□□ -1.8
SWD3YBR175W TPO2P53283 614 aa3.78□□□□□ -1.8
SWD3YBR175W RSC2Q06488 889 aa3.78□□□□□ -1.8
SWD3YBR175W GRX1P25373 110 aaKnown RBP3.77□□□□□ -1.81
SWD3YBR175W NUP82P40368 713 aa3.77□□□□□ -1.81
SWD3YBR175W RAD4P14736 754 aa3.76□□□□□ -1.81
SWD3YBR175W TIM23P32897 222 aa3.76□□□□□ -1.81
SWD3YBR175W IRS4P36115 615 aaKnown RBP3.76□□□□□ -1.81
SWD3YBR175W AIM46P38885 310 aa3.76□□□□□ -1.81
SWD3YBR175W PMC1P38929 1173 aaPredicted RBP3.76□□□□□ -1.81
SWD3YBR175W RAD55P38953 406 aa3.76□□□□□ -1.81
SWD3YBR175W NAB3P38996 802 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
SWD3YBR175W UBP12P39538 1254 aa3.76□□□□□ -1.81
SWD3YBR175W IRC24P40580 263 aa3.76□□□□□ -1.81
SWD3YBR175W MSH4P40965 878 aaPredicted RBP3.76□□□□□ -1.81
SWD3YBR175W SAM37P50110 327 aa3.76□□□□□ -1.81
SWD3YBR175W CDC55Q00362 526 aa3.76□□□□□ -1.81
SWD3YBR175W UTP14Q04500 899 aaKnown RBP3.76□□□□□ -1.81
SWD3YBR175W EMG1Q06287 252 aaKnown RBP3.76□□□□□ -1.81
SWD3YBR175W PPM2Q08282 695 aa3.76□□□□□ -1.81
SWD3YBR175W OXR1Q08952 273 aa3.76□□□□□ -1.81
SWD3YBR175W SLP1Q12232 587 aa3.76□□□□□ -1.81
SWD3YBR175W RAD2P07276 1031 aa3.75□□□□□ -1.81
SWD3YBR175W FAA3P39002 694 aa3.75□□□□□ -1.81
SWD3YBR175W YEN1P40028 759 aa3.75□□□□□ -1.81
SWD3YBR175W PSY2P40164 858 aa3.75□□□□□ -1.81
SWD3YBR175W NOP2P40991 618 aaKnown RBP3.75□□□□□ -1.81
SWD3YBR175W FAA4P47912 694 aaKnown RBP3.75□□□□□ -1.81
SWD3YBR175W RSC4Q02206 625 aa3.75□□□□□ -1.81
SWD3YBR175W GDE1Q02979 1223 aa3.75□□□□□ -1.81
SWD3YBR175W TOS4Q06266 489 aa3.75□□□□□ -1.81
SWD3YBR175W TIF6Q12522 245 aaKnown RBP3.75□□□□□ -1.81
SWD3YBR175W TY4B-PA0A0B7P3V8 1104 aa3.74□□□□□ -1.81
SWD3YBR175W PHO8P11491 566 aa3.74□□□□□ -1.81
SWD3YBR175W PRI2P20457 528 aa3.74□□□□□ -1.81
SWD3YBR175W YHL008CP38750 627 aa3.74□□□□□ -1.81
SWD3YBR175W CIC1P38779 376 aaKnown RBP3.74□□□□□ -1.81
SWD3YBR175W TIM54P47045 478 aa3.74□□□□□ -1.81
SWD3YBR175W YNL011CP53980 444 aa3.74□□□□□ -1.81
SWD3YBR175W NAN1Q02931 896 aaKnown RBP3.74□□□□□ -1.81
SWD3YBR175W TDA5Q06417 326 aaKnown RBP3.74□□□□□ -1.81
SWD3YBR175W GIN4Q12263 1142 aa3.74□□□□□ -1.81
SWD3YBR175W TY4A-HQ6Q5P6 413 aa3.74□□□□□ -1.81
SWD3YBR175W TRP3P00937 484 aa3.73□□□□□ -1.81
SWD3YBR175W HXK1P04806 485 aaKnown RBP3.73□□□□□ -1.81
SWD3YBR175W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
SWD3YBR175W GRX7P38068 203 aa3.73□□□□□ -1.81
SWD3YBR175W SPF1P39986 1215 aaKnown RBP3.73□□□□□ -1.81
SWD3YBR175W PPT1P53043 513 aa3.73□□□□□ -1.81
SWD3YBR175W NOC3Q07896 663 aaPredicted RBP3.73□□□□□ -1.81
SWD3YBR175W MED7Q08278 222 aa3.73□□□□□ -1.81
SWD3YBR175W YLR125WQ12138 136 aa3.73□□□□□ -1.81
SWD3YBR175W CDC34P14682 295 aa3.72□□□□□ -1.81
SWD3YBR175W SRM1P21827 482 aa3.72□□□□□ -1.81
SWD3YBR175W RSC6P25632 483 aa3.72□□□□□ -1.81
SWD3YBR175W COQ2P32378 372 aa3.72□□□□□ -1.81
SWD3YBR175W KAE1P36132 386 aa3.72□□□□□ -1.81
SWD3YBR175W YKR073CP36153 106 aa3.72□□□□□ -1.81
SWD3YBR175W CRP1P38845 465 aaKnown RBP3.72□□□□□ -1.81
SWD3YBR175W INP51P40559 946 aaKnown RBP3.72□□□□□ -1.81
SWD3YBR175W LEM3P42838 414 aa3.72□□□□□ -1.81
SWD3YBR175W ZDS1P50111 915 aaKnown RBP3.72□□□□□ -1.81
SWD3YBR175W BIO5P53744 561 aaKnown RBP3.72□□□□□ -1.81
SWD3YBR175W OPI10Q08202 246 aa3.72□□□□□ -1.81
SWD3YBR175W YLR122CQ12312 125 aa3.72□□□□□ -1.81
SWD3YBR175W FUS1P11710 512 aa3.71□□□□□ -1.82
SWD3YBR175W PRE9P23638 258 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms