RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A YIG1Q08956 461 aa4.88□□□□□ -1.63
SUS1YBR111W-A TY1A-LR4P0C2I8 440 aaKnown RBP4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-DR6P0CX70 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-ER1P0CX71 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-LR2P0CX72 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-PLP0CX73 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-JR1P0CX74 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-LR3P0CX75 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-ML2P0CX76 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A PEX13P80667 386 aa4.87□□□□□ -1.63
SUS1YBR111W-A NOG1Q02892 647 aaKnown RBP4.87□□□□□ -1.63
SUS1YBR111W-A GAS5Q08193 484 aa4.87□□□□□ -1.63
SUS1YBR111W-A ELG1Q12050 791 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-GR1Q12085 440 aa4.87□□□□□ -1.63
SUS1YBR111W-A PHM7Q12252 991 aa4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-PR3Q6Q5H1 440 aaKnown RBP4.87□□□□□ -1.63
SUS1YBR111W-A TY1A-OLQ92392 440 aaKnown RBP4.87□□□□□ -1.63
SUS1YBR111W-A ERS1P17261 260 aa4.86□□□□□ -1.63
SUS1YBR111W-A MSH3P25336 1018 aa4.86□□□□□ -1.63
SUS1YBR111W-A YKL077WP36081 392 aa4.86□□□□□ -1.63
SUS1YBR111W-A PAM1P37304 830 aaKnown RBP4.86□□□□□ -1.63
SUS1YBR111W-A EXO5P38289 585 aa4.86□□□□□ -1.63
SUS1YBR111W-A PEX28P38848 579 aa4.86□□□□□ -1.63
SUS1YBR111W-A PIC2P40035 300 aa4.86□□□□□ -1.63
SUS1YBR111W-A LSB3P43603 459 aaKnown RBP4.86□□□□□ -1.63
SUS1YBR111W-A BUD9P53226 547 aa4.86□□□□□ -1.63
SUS1YBR111W-A UTP22P53254 1237 aaPredicted RBP4.86□□□□□ -1.63
SUS1YBR111W-A DSE4P53753 1117 aa4.86□□□□□ -1.63
SUS1YBR111W-A RMD1Q03441 430 aa4.86□□□□□ -1.63
SUS1YBR111W-A MAE1P36013 669 aaKnown RBP4.85□□□□□ -1.63
SUS1YBR111W-A PRY1P47032 299 aa4.85□□□□□ -1.63
SUS1YBR111W-A GCV1P48015 400 aa4.85□□□□□ -1.63
SUS1YBR111W-A YMR074CQ04773 145 aa4.85□□□□□ -1.63
SUS1YBR111W-A YDR215CQ12240 137 aa4.85□□□□□ -1.63
SUS1YBR111W-A YPR053CQ6Q5F3 151 aa4.85□□□□□ -1.63
SUS1YBR111W-A NOP7P53261 605 aaKnown RBP4.84□□□□□ -1.63
SUS1YBR111W-A FAR11P53917 953 aa4.84□□□□□ -1.63
SUS1YBR111W-A MEC3Q02574 474 aa4.84□□□□□ -1.63
SUS1YBR111W-A YMR187CQ03236 431 aa4.84□□□□□ -1.63
SUS1YBR111W-A SVF1Q05515 481 aa4.84□□□□□ -1.63
SUS1YBR111W-A TY1A-NL1Q12391 440 aaKnown RBP4.84□□□□□ -1.63
SUS1YBR111W-A SEC23P15303 768 aaKnown RBP4.83□□□□□ -1.64
SUS1YBR111W-A YCK2P23292 546 aaKnown RBP4.83□□□□□ -1.64
SUS1YBR111W-A SFA1P32771 386 aa4.83□□□□□ -1.64
SUS1YBR111W-A PET112P33893 541 aa4.83□□□□□ -1.64
SUS1YBR111W-A NEM1P38757 446 aa4.83□□□□□ -1.64
SUS1YBR111W-A ICP55P40051 511 aa4.83□□□□□ -1.64
SUS1YBR111W-A XKS1P42826 600 aa4.83□□□□□ -1.64
SUS1YBR111W-A KIP3P53086 805 aaKnown RBP4.83□□□□□ -1.64
SUS1YBR111W-A YGL140CP53120 1219 aa4.83□□□□□ -1.64
SUS1YBR111W-A AI3P03877 415 aa4.82□□□□□ -1.64
SUS1YBR111W-A REI1P38344 393 aaPredicted RBP4.82□□□□□ -1.64
SUS1YBR111W-A SLN1P39928 1220 aaPredicted RBP4.82□□□□□ -1.64
SUS1YBR111W-A SLS1P42900 643 aa4.82□□□□□ -1.64
SUS1YBR111W-A MTR4P47047 1073 aaKnown RBP4.82□□□□□ -1.64
SUS1YBR111W-A NRD1P53617 575 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64 RIP-Chip
SUS1YBR111W-A JIP5Q06214 492 aaPredicted RBP4.82□□□□□ -1.64
SUS1YBR111W-A PUS1Q12211 544 aaKnown RBP4.82□□□□□ -1.64
SUS1YBR111W-A YLL054CQ12244 843 aa4.82□□□□□ -1.64
SUS1YBR111W-A HEM13P11353 328 aaKnown RBP4.81□□□□□ -1.64
SUS1YBR111W-A VMA4P22203 233 aaKnown RBP4.81□□□□□ -1.64
SUS1YBR111W-A RDH54P38086 958 aa4.81□□□□□ -1.64
SUS1YBR111W-A ARL1P38116 183 aaKnown RBP4.81□□□□□ -1.64
SUS1YBR111W-A MRL1Q06815 381 aa4.81□□□□□ -1.64
SUS1YBR111W-A ALG6Q12001 544 aaKnown RBP4.81□□□□□ -1.64
SUS1YBR111W-A SCP160P06105 1222 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
SUS1YBR111W-A NAP1P25293 417 aaKnown RBP4.8□□□□□ -1.64
SUS1YBR111W-A RSC6P25632 483 aa4.8□□□□□ -1.64
SUS1YBR111W-A TAT1P38085 619 aa4.8□□□□□ -1.64
SUS1YBR111W-A NCE103P53615 221 aa4.8□□□□□ -1.64
SUS1YBR111W-A UTP5Q04177 643 aaKnown RBP4.8□□□□□ -1.64
SUS1YBR111W-A YOR223WQ12015 292 aa4.8□□□□□ -1.64
SUS1YBR111W-A GCR1P07261 785 aa4.79□□□□□ -1.64
SUS1YBR111W-A TAF13P11747 167 aa4.79□□□□□ -1.64
SUS1YBR111W-A MNR2P35724 969 aa4.79□□□□□ -1.64
SUS1YBR111W-A SKN7P38889 622 aa4.79□□□□□ -1.64
SUS1YBR111W-A MET10P39692 1035 aa4.79□□□□□ -1.64
SUS1YBR111W-A SPO74P45819 413 aa4.79□□□□□ -1.64
SUS1YBR111W-A ARI1P53111 347 aaKnown RBP4.79□□□□□ -1.64
SUS1YBR111W-A DOT1Q04089 582 aaKnown RBP4.79□□□□□ -1.64
SUS1YBR111W-A HDA2Q06629 674 aa4.79□□□□□ -1.64
SUS1YBR111W-A REC8Q12188 680 aa4.79□□□□□ -1.64
SUS1YBR111W-A CLN2P20438 545 aa4.78□□□□□ -1.64
SUS1YBR111W-A MAD1P40957 749 aa4.78□□□□□ -1.64
SUS1YBR111W-A GNP1P48813 663 aa4.78□□□□□ -1.64
SUS1YBR111W-A AVO1Q08236 1176 aa4.78□□□□□ -1.64
SUS1YBR111W-A MCA1Q08601 432 aa4.78□□□□□ -1.64
SUS1YBR111W-A DED1P06634 604 aaKnown RBP4.77□□□□□ -1.65
SUS1YBR111W-A CDC34P14682 295 aa4.77□□□□□ -1.65
SUS1YBR111W-A GPT2P36148 743 aa4.77□□□□□ -1.65
SUS1YBR111W-A ATG14P38270 344 aa4.77□□□□□ -1.65
SUS1YBR111W-A YGR045CP53229 120 aa4.77□□□□□ -1.65
SUS1YBR111W-A ELA1P53861 379 aaPredicted RBP4.77□□□□□ -1.65
SUS1YBR111W-A SIW14P53965 281 aa4.77□□□□□ -1.65
SUS1YBR111W-A ROD1Q02805 837 aa4.77□□□□□ -1.65
SUS1YBR111W-A VPS16Q03308 798 aa4.77□□□□□ -1.65
SUS1YBR111W-A EST2Q06163 884 aa4.77□□□□□ -1.65
SUS1YBR111W-A DUT1P33317 147 aa4.76□□□□□ -1.65
SUS1YBR111W-A ADD66P36040 267 aa4.76□□□□□ -1.65
SUS1YBR111W-A AKR1P39010 764 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms