RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C PRP22P24384 1145 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C CLA4P48562 842 aa2.23□□□□□ -2.05
PEP1YBL017C YAF9P53930 226 aa2.23□□□□□ -2.05
PEP1YBL017C YPL034WQ03083 165 aa2.23□□□□□ -2.05
PEP1YBL017C TMA64Q04600 565 aaKnown RBP2.23□□□□□ -2.05
PEP1YBL017C NUC1P08466 329 aa2.22□□□□□ -2.05
PEP1YBL017C TRL1P09880 827 aaKnown RBP2.22□□□□□ -2.05
PEP1YBL017C ADP1P25371 1049 aa2.22□□□□□ -2.05
PEP1YBL017C RFC1P38630 861 aaKnown RBP2.22□□□□□ -2.05
PEP1YBL017C PUS6P53294 404 aa2.22□□□□□ -2.05
PEP1YBL017C LYS14P40971 790 aa2.22□□□□□ -2.05
PEP1YBL017C RET3P53600 189 aa2.22□□□□□ -2.05
PEP1YBL017C YDR344CQ05510 147 aa2.22□□□□□ -2.05
PEP1YBL017C SPN1Q06505 410 aaPredicted RBP2.22□□□□□ -2.05
PEP1YBL017C CTI6Q08923 506 aa2.22□□□□□ -2.05
PEP1YBL017C ERP3Q12403 225 aa2.22□□□□□ -2.05
PEP1YBL017C PHR1P05066 565 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
PEP1YBL017C RNA1P11745 407 aaKnown RBP2.22□□□□□ -2.05
PEP1YBL017C COQ1P18900 473 aa2.22□□□□□ -2.05
PEP1YBL017C RNR3P21672 869 aaKnown RBP2.22□□□□□ -2.05
PEP1YBL017C RIM4P38741 713 aa2.22□□□□□ -2.05
PEP1YBL017C PAN5P38787 379 aa2.22□□□□□ -2.05
PEP1YBL017C VHR2P40041 505 aa2.22□□□□□ -2.05
PEP1YBL017C DAK2P43550 591 aa2.22□□□□□ -2.05
PEP1YBL017C GCR2Q01722 534 aa2.22□□□□□ -2.05
PEP1YBL017C PIB1Q06651 286 aa2.22□□□□□ -2.05
PEP1YBL017C AI2P03876 854 aa2.22□□□□□ -2.05
PEP1YBL017C PFK2P16862 959 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
PEP1YBL017C DPB3P27344 201 aa2.22□□□□□ -2.05
PEP1YBL017C AFG2P32794 780 aa2.22□□□□□ -2.05
PEP1YBL017C PTK1P36002 662 aaPredicted RBP2.22□□□□□ -2.05
PEP1YBL017C VAB2P40003 282 aa2.22□□□□□ -2.05
PEP1YBL017C KRE33P53914 1056 aaKnown RBP2.22□□□□□ -2.05
PEP1YBL017C SRC1Q03707 834 aa2.22□□□□□ -2.05
PEP1YBL017C SNU66Q12420 587 aaPredicted RBP2.22□□□□□ -2.05
PEP1YBL017C YDR034W-BQ6Q5X2 51 aa2.22□□□□□ -2.05
PEP1YBL017C HPR1P17629 752 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C SLI15P38283 698 aa2.21□□□□□ -2.06
PEP1YBL017C AFG3P39925 761 aa2.21□□□□□ -2.06
PEP1YBL017C YGR122WP53272 402 aa2.21□□□□□ -2.06
PEP1YBL017C YNL193WP53870 558 aa2.21□□□□□ -2.06
PEP1YBL017C RPS9AO13516 197 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C TUB2P02557 457 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C EST1P17214 699 aaPredicted RBP2.21□□□□□ -2.06
PEP1YBL017C KSP1P38691 1029 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C FIR1P40020 876 aa2.21□□□□□ -2.06
PEP1YBL017C PUS2P53167 370 aa2.21□□□□□ -2.06
PEP1YBL017C SQS1P53866 767 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C PRE10P21242 288 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
PEP1YBL017C NGR1P32831 672 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C MAC1P35192 417 aa2.21□□□□□ -2.06
PEP1YBL017C MET1P36150 593 aa2.21□□□□□ -2.06
PEP1YBL017C YNG2P38806 282 aaKnown RBP2.21□□□□□ -2.06
PEP1YBL017C IRC8P47046 822 aa2.21□□□□□ -2.06
PEP1YBL017C YMR321CQ04898 105 aa2.21□□□□□ -2.06
PEP1YBL017C CFT2Q12102 859 aaPredicted RBP2.21□□□□□ -2.06
PEP1YBL017C CBP1P07252 654 aa2.2□□□□□ -2.06
PEP1YBL017C FIG4P42837 879 aa2.2□□□□□ -2.06
PEP1YBL017C INM2Q05533 292 aa2.2□□□□□ -2.06
PEP1YBL017C CDC53Q12018 815 aaKnown RBP2.2□□□□□ -2.06
PEP1YBL017C RIM20Q12033 661 aa2.2□□□□□ -2.06
PEP1YBL017C GIN4Q12263 1142 aa2.2□□□□□ -2.06
PEP1YBL017C THS1P04801 734 aaKnown RBP2.2□□□□□ -2.06
PEP1YBL017C GAP1P19145 602 aaPredicted RBP2.2□□□□□ -2.06
PEP1YBL017C CKA2P19454 339 aa2.2□□□□□ -2.06
PEP1YBL017C ISM1P48526 1002 aa2.2□□□□□ -2.06
PEP1YBL017C UBP10P53874 792 aaPredicted RBP2.2□□□□□ -2.06
PEP1YBL017C SUB1P54000 292 aaKnown RBP2.2□□□□□ -2.06
PEP1YBL017C ROD1Q02805 837 aa2.2□□□□□ -2.06
PEP1YBL017C ECM7Q06200 448 aa2.2□□□□□ -2.06
PEP1YBL017C DSE3Q08729 430 aa2.2□□□□□ -2.06
PEP1YBL017C LSP1Q12230 341 aaKnown RBP2.2□□□□□ -2.06
PEP1YBL017C SUT2Q12286 268 aa2.2□□□□□ -2.06
PEP1YBL017C CDC19P00549 500 aaKnown RBP2.2□□□□□ -2.06
PEP1YBL017C MCR1P36060 302 aaKnown RBP2.2□□□□□ -2.06
PEP1YBL017C FOB1O13329 566 aa2.2□□□□□ -2.06
PEP1YBL017C ELM1P32801 640 aa2.2□□□□□ -2.06
PEP1YBL017C BRL1P38770 471 aa2.2□□□□□ -2.06
PEP1YBL017C ACA1P39970 489 aa2.2□□□□□ -2.06
PEP1YBL017C NUP82P40368 713 aa2.2□□□□□ -2.06
PEP1YBL017C JJJ2P46997 583 aa2.2□□□□□ -2.06
PEP1YBL017C CAF130P53280 1122 aaPredicted RBP2.2□□□□□ -2.06
PEP1YBL017C TCO89Q08921 799 aa2.2□□□□□ -2.06
PEP1YBL017C RLF2Q12495 606 aa2.2□□□□□ -2.06
PEP1YBL017C ALG1P16661 449 aa2.19□□□□□ -2.06
PEP1YBL017C AFT1P22149 690 aa2.19□□□□□ -2.06
PEP1YBL017C EUG1P32474 517 aa2.19□□□□□ -2.06
PEP1YBL017C ANP1P32629 500 aa2.19□□□□□ -2.06
PEP1YBL017C RPT1P33299 467 aaKnown RBP2.19□□□□□ -2.06
PEP1YBL017C YGR153WP48238 217 aa2.19□□□□□ -2.06
PEP1YBL017C PMA1P05030 918 aaKnown RBP2.19□□□□□ -2.06
PEP1YBL017C SNA3P14359 133 aa2.19□□□□□ -2.06
PEP1YBL017C SLX1P38324 304 aa2.19□□□□□ -2.06
PEP1YBL017C RRD1P40454 393 aaKnown RBP2.19□□□□□ -2.06
PEP1YBL017C LSB6P42951 607 aa2.19□□□□□ -2.06
PEP1YBL017C CUE3P53137 624 aaKnown RBP2.19□□□□□ -2.06
PEP1YBL017C NAF1P53919 492 aaKnown RBP2.19□□□□□ -2.06
PEP1YBL017C CIR2Q08822 631 aa2.19□□□□□ -2.06
PEP1YBL017C RPL17AP05740 184 aaKnown RBP2.19□□□□□ -2.06
PEP1YBL017C RPL17BP46990 184 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms