RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 TRPC5Q9UL62 973 aaPredicted RBP12.55□□□□□ -0.4
UBBP4-201ENST00000583708 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
UBBP4-201ENST00000583708 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
UBBP4-201ENST00000583708 MARF1Q9Y4F3 1742 aaKnown RBP12.54□□□□□ -0.4
UBBP4-201ENST00000583708 RRS1Q15050 365 aaKnown RBP12.54□□□□□ -0.4
UBBP4-201ENST00000583708 AFF2P51816 1311 aa12.54□□□□□ -0.4
UBBP4-201ENST00000583708 WDR17Q8IZU2 1322 aa12.54□□□□□ -0.4
UBBP4-201ENST00000583708 ABCA3Q99758 1704 aa12.54□□□□□ -0.4
UBBP4-201ENST00000583708 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
UBBP4-201ENST00000583708 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
UBBP4-201ENST00000583708 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
UBBP4-201ENST00000583708 PHF23Q9BUL5 403 aaPredicted RBP12.53□□□□□ -0.4
UBBP4-201ENST00000583708 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
UBBP4-201ENST00000583708 CARD10Q9BWT7 1032 aa12.53□□□□□ -0.4
UBBP4-201ENST00000583708 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
UBBP4-201ENST00000583708 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
UBBP4-201ENST00000583708 PLEKHG2Q9H7P9 1386 aa12.53□□□□□ -0.4
UBBP4-201ENST00000583708 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.41
UBBP4-201ENST00000583708 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
UBBP4-201ENST00000583708 AXIN2Q9Y2T1 843 aa12.52□□□□□ -0.41
UBBP4-201ENST00000583708 ERBB3P21860 1342 aa12.52□□□□□ -0.41
UBBP4-201ENST00000583708 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
UBBP4-201ENST00000583708 CDK12Q9NYV4 1490 aaPredicted RBP12.52□□□□□ -0.41
UBBP4-201ENST00000583708 ZBTB7CA1YPR0 619 aa12.51□□□□□ -0.41
UBBP4-201ENST00000583708 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
UBBP4-201ENST00000583708 DIEXFQ68CQ4 756 aaKnown RBP12.51□□□□□ -0.41
UBBP4-201ENST00000583708 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
UBBP4-201ENST00000583708 QTRT2Q9H974 415 aaKnown RBP12.51□□□□□ -0.41
UBBP4-201ENST00000583708 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
UBBP4-201ENST00000583708 DIAPH1O60610 1272 aaKnown RBP12.5□□□□□ -0.41
UBBP4-201ENST00000583708 CSB-PGBD3P0DP91 1061 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 FBLN1P23142 703 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 RBM6P78332 1123 aaKnown RBP12.5□□□□□ -0.41
UBBP4-201ENST00000583708 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 GJD4Q96KN9 370 aaPredicted RBP12.5□□□□□ -0.41
UBBP4-201ENST00000583708 SPATA31A5Q5VU36 1347 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 SPATA31A7Q8IWB4 1347 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 CRB1P82279 1406 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
UBBP4-201ENST00000583708 LMO7Q8WWI1 1683 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 COL18A1P39060 1754 aa12.5□□□□□ -0.41
UBBP4-201ENST00000583708 ATRNO75882 1429 aa12.49□□□□□ -0.41
UBBP4-201ENST00000583708 ONECUT3O60422 494 aaPredicted RBP12.49□□□□□ -0.41
UBBP4-201ENST00000583708 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
UBBP4-201ENST00000583708 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
UBBP4-201ENST00000583708 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
UBBP4-201ENST00000583708 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
UBBP4-201ENST00000583708 IL13P35225 146 aa12.48□□□□□ -0.41
UBBP4-201ENST00000583708 TCP11L2Q8N4U5 519 aa12.48□□□□□ -0.41
UBBP4-201ENST00000583708 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
UBBP4-201ENST00000583708 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.48□□□□□ -0.41
UBBP4-201ENST00000583708 CCER2I3L3R5 266 aa12.47□□□□□ -0.41
UBBP4-201ENST00000583708 RXRBP28702 533 aa12.47□□□□□ -0.41
UBBP4-201ENST00000583708 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
UBBP4-201ENST00000583708 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
UBBP4-201ENST00000583708 NLRP2Q9NX02 1062 aa12.47□□□□□ -0.41
UBBP4-201ENST00000583708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.41
UBBP4-201ENST00000583708 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
UBBP4-201ENST00000583708 LTN1O94822 1766 aa12.46□□□□□ -0.42
UBBP4-201ENST00000583708 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
UBBP4-201ENST00000583708 FCHSD2O94868 740 aa12.45□□□□□ -0.42
UBBP4-201ENST00000583708 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
UBBP4-201ENST00000583708 EYA1Q99502 592 aa12.45□□□□□ -0.42
UBBP4-201ENST00000583708 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
UBBP4-201ENST00000583708 NCAPD2Q15021 1401 aa12.45□□□□□ -0.42
UBBP4-201ENST00000583708 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
UBBP4-201ENST00000583708 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
UBBP4-201ENST00000583708 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
UBBP4-201ENST00000583708 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
UBBP4-201ENST00000583708 PLCH1Q4KWH8 1693 aa12.44□□□□□ -0.42
UBBP4-201ENST00000583708 FAM208AQ9UK61 1670 aaKnown RBP12.44□□□□□ -0.42
UBBP4-201ENST00000583708 IL2RBP14784 551 aa12.43□□□□□ -0.42
UBBP4-201ENST00000583708 KDRP35968 1356 aa12.43□□□□□ -0.42
UBBP4-201ENST00000583708 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
UBBP4-201ENST00000583708 NEFMP07197 916 aa12.42□□□□□ -0.42
UBBP4-201ENST00000583708 TATP17735 454 aaPredicted RBP12.42□□□□□ -0.42
UBBP4-201ENST00000583708 AMOTQ4VCS5 1084 aa12.42□□□□□ -0.42
UBBP4-201ENST00000583708 PEAK1Q9H792 1746 aa12.42□□□□□ -0.42
UBBP4-201ENST00000583708 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
UBBP4-201ENST00000583708 EXOC5O00471 708 aa12.41□□□□□ -0.42
UBBP4-201ENST00000583708 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBBP4-201ENST00000583708 POTEAQ6S8J7 498 aa12.41□□□□□ -0.42
UBBP4-201ENST00000583708 U2SURPO15042 1029 aaKnown RBP12.4□□□□□ -0.42
UBBP4-201ENST00000583708 U2AF1L5P0DN76 240 aaPredicted RBP12.4□□□□□ -0.42
UBBP4-201ENST00000583708 U2AF1Q01081 240 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBBP4-201ENST00000583708 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
UBBP4-201ENST00000583708 SULT6B1Q6IMI4 303 aa12.4□□□□□ -0.42
UBBP4-201ENST00000583708 SPG7Q9UQ90 795 aa12.4□□□□□ -0.42
UBBP4-201ENST00000583708 DDB1Q16531 1140 aa12.39□□□□□ -0.43
UBBP4-201ENST00000583708 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
UBBP4-201ENST00000583708 DISP2A7MBM2 1401 aa12.38□□□□□ -0.43
UBBP4-201ENST00000583708 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
UBBP4-201ENST00000583708 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
UBBP4-201ENST00000583708 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
UBBP4-201ENST00000583708 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
UBBP4-201ENST00000583708 USP35Q9P2H5 1018 aa12.38□□□□□ -0.43
UBBP4-201ENST00000583708 HSP90AB1P08238 724 aaKnown RBP12.37□□□□□ -0.43
UBBP4-201ENST00000583708 PDE3BQ13370 1112 aa12.37□□□□□ -0.43
UBBP4-201ENST00000583708 SEPT12Q8IYM1 358 aa12.37□□□□□ -0.43
UBBP4-201ENST00000583708 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms