RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 NR1H3Q13133 447 aa9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 CD2BP2O95400 341 aaKnown RBP9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 RPIAP49247 311 aa9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 PRKD2Q9BZL6 878 aa9.05□□□□□ -0.96
AMBRA1-209ENST00000529963 SH3RF1Q7Z6J0 888 aa9.04□□□□□ -0.96
AMBRA1-209ENST00000529963 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
AMBRA1-209ENST00000529963 ADAMTS19Q8TE59 1207 aa9.04□□□□□ -0.96
AMBRA1-209ENST00000529963 SOGA1O94964 1423 aa9.04□□□□□ -0.96
AMBRA1-209ENST00000529963 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
AMBRA1-209ENST00000529963 RAD54L2Q9Y4B4 1467 aa9.03□□□□□ -0.96
AMBRA1-209ENST00000529963 CHD1O14646 1710 aa9.02□□□□□ -0.97
AMBRA1-209ENST00000529963 HDGFL1Q5TGJ6 251 aa9.02□□□□□ -0.97
AMBRA1-209ENST00000529963 SPRYD7Q5W111 196 aa9.02□□□□□ -0.97
AMBRA1-209ENST00000529963 GLMNQ92990 594 aa9.02□□□□□ -0.97
AMBRA1-209ENST00000529963 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
AMBRA1-209ENST00000529963 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.97
AMBRA1-209ENST00000529963 RC3H1Q5TC82 1133 aaKnown RBP9.01□□□□□ -0.97
AMBRA1-209ENST00000529963 GPSM3Q9Y4H4 160 aa9.01□□□□□ -0.97
AMBRA1-209ENST00000529963 WDR97A6NE52 1622 aa9.01□□□□□ -0.97
AMBRA1-209ENST00000529963 FGD5Q6ZNL6 1462 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 WNT7BP56706 349 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 ERFEQ4G0M1 354 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 ARID3AQ99856 593 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 FOXC1Q12948 553 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 ZNF697Q5TEC3 545 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 EHBP1Q8NDI1 1231 aa9□□□□□ -0.97
AMBRA1-209ENST00000529963 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
AMBRA1-209ENST00000529963 SNAPC4Q5SXM2 1469 aa8.99□□□□□ -0.97
AMBRA1-209ENST00000529963 EIF4G2P78344 907 aaKnown RBP eCLIP8.99□□□□□ -0.97
AMBRA1-209ENST00000529963 SEMA3FQ13275 785 aa8.99□□□□□ -0.97
AMBRA1-209ENST00000529963 ALG2Q9H553 416 aa8.99□□□□□ -0.97
AMBRA1-209ENST00000529963 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
AMBRA1-209ENST00000529963 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
AMBRA1-209ENST00000529963 MAGI1Q96QZ7 1491 aaPredicted RBP8.98□□□□□ -0.97
AMBRA1-209ENST00000529963 CUX1P39880 1505 aa8.98□□□□□ -0.97
AMBRA1-209ENST00000529963 ARID5BQ14865 1188 aa8.97□□□□□ -0.97
AMBRA1-209ENST00000529963 ZNF598Q86UK7 904 aaKnown RBP8.97□□□□□ -0.97
AMBRA1-209ENST00000529963 MRGPRX2Q96LB1 330 aa8.97□□□□□ -0.97
AMBRA1-209ENST00000529963 TLL2Q9Y6L7 1015 aa8.97□□□□□ -0.97
AMBRA1-209ENST00000529963 GRIN2BQ13224 1484 aa8.97□□□□□ -0.97
AMBRA1-209ENST00000529963 VARSP26640 1264 aaKnown RBP8.96□□□□□ -0.97
AMBRA1-209ENST00000529963 CCDC82Q8N4S0 544 aa8.96□□□□□ -0.97
AMBRA1-209ENST00000529963 C1QTNF2Q9BXJ5 285 aa8.96□□□□□ -0.97
AMBRA1-209ENST00000529963 SYNJ1O43426 1573 aa8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 V9GY48 417 aaPredicted RBP8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 TNFRSF10AO00220 468 aa8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 PIK3CDO00329 1044 aa8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 FAM174AQ8TBP5 190 aa8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 SLC10A4Q96EP9 437 aa8.95□□□□□ -0.98
AMBRA1-209ENST00000529963 CLASP1Q7Z460 1538 aa8.94□□□□□ -0.98
AMBRA1-209ENST00000529963 SYNJ2O15056 1496 aa8.94□□□□□ -0.98
AMBRA1-209ENST00000529963 WNT7AO00755 349 aa8.94□□□□□ -0.98
AMBRA1-209ENST00000529963 RAB15P59190 212 aa8.94□□□□□ -0.98
AMBRA1-209ENST00000529963 CEP126Q9P2H0 1117 aa8.94□□□□□ -0.98
AMBRA1-209ENST00000529963 SIAH2O43255 324 aa8.93□□□□□ -0.98
AMBRA1-209ENST00000529963 GIGYF1O75420 1035 aaPredicted RBP8.93□□□□□ -0.98
AMBRA1-209ENST00000529963 SOX11P35716 441 aa8.93□□□□□ -0.98
AMBRA1-209ENST00000529963 UCN2Q96RP3 112 aa8.93□□□□□ -0.98
AMBRA1-209ENST00000529963 VASH1Q7L8A9 365 aaPredicted RBP8.92□□□□□ -0.98
AMBRA1-209ENST00000529963 GAPVD1Q14C86 1478 aa8.92□□□□□ -0.98
AMBRA1-209ENST00000529963 TSGA10IPQ3SY00 556 aa8.91□□□□□ -0.98
AMBRA1-209ENST00000529963 TRMT44Q8IYL2 757 aaKnown RBP8.91□□□□□ -0.98
AMBRA1-209ENST00000529963 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
AMBRA1-209ENST00000529963 GDF9O60383 454 aa8.9□□□□□ -0.98
AMBRA1-209ENST00000529963 ALDH1A1P00352 501 aa8.9□□□□□ -0.98
AMBRA1-209ENST00000529963 TBC1D9Q6ZT07 1266 aa8.9□□□□□ -0.98
AMBRA1-209ENST00000529963 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
AMBRA1-209ENST00000529963 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
AMBRA1-209ENST00000529963 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
AMBRA1-209ENST00000529963 PBRM1Q86U86 1689 aa8.89□□□□□ -0.99
AMBRA1-209ENST00000529963 RFX1P22670 979 aa8.89□□□□□ -0.99
AMBRA1-209ENST00000529963 FSHRP23945 695 aa8.89□□□□□ -0.99
AMBRA1-209ENST00000529963 SLFNL1Q499Z3 407 aa8.89□□□□□ -0.99
AMBRA1-209ENST00000529963 TFIP11Q9UBB9 837 aaKnown RBP8.89□□□□□ -0.99
AMBRA1-209ENST00000529963 J3QL48 77 aa8.88□□□□□ -0.99
AMBRA1-209ENST00000529963 GRM5P41594 1212 aa8.88□□□□□ -0.99
AMBRA1-209ENST00000529963 RNF135Q8IUD6 432 aa8.88□□□□□ -0.99
AMBRA1-209ENST00000529963 PPP1R12CQ9BZL4 782 aa8.88□□□□□ -0.99
AMBRA1-209ENST00000529963 ABCA5Q8WWZ7 1642 aa8.88□□□□□ -0.99
AMBRA1-209ENST00000529963 WRNQ14191 1432 aaPredicted RBP eCLIP8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 PALM3A6NDB9 673 aaPredicted RBP8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 SKIP12755 728 aa8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 NBPF20Q3BBV1 942 aa8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 DEPDC4Q8N2C3 294 aa8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 PHTF2Q8N3S3 785 aa8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 CDK15Q96Q40 435 aa8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 SERPINA10Q9UK55 444 aa8.87□□□□□ -0.99
AMBRA1-209ENST00000529963 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
AMBRA1-209ENST00000529963 CYP4X1Q8N118 509 aa8.86□□□□□ -0.99
AMBRA1-209ENST00000529963 CCDC85AQ96PX6 553 aaPredicted RBP8.86□□□□□ -0.99
AMBRA1-209ENST00000529963 ADH1CP00326 375 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 NR3C2P08235 984 aa8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 SNIP1Q8TAD8 396 aaKnown RBP8.85□□□□□ -0.99
AMBRA1-209ENST00000529963 CDCA7Q9BWT1 371 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms