RNA–Protein interactions for RNA: ENST00000511284.5

TRIM6-210, Transcript of tripartite motif containing 6, human

TSL 5

Gene TRIM6, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-210	ENST00000511284	NRAP	Q86VF7	1730 aa		11.4	□□□□□ -0.58
TRIM6-210	ENST00000511284	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
TRIM6-210	ENST00000511284	FAM98C	Q17RN3	349 aa	Known RBP	11.4	□□□□□ -0.58
TRIM6-210	ENST00000511284	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
TRIM6-210	ENST00000511284	PIK3C2A	O00443	1686 aa		11.4	□□□□□ -0.59
TRIM6-210	ENST00000511284	UTRN	P46939	3433 aa		11.39	□□□□□ -0.59
TRIM6-210	ENST00000511284	STRN4	Q9NRL3	753 aa		11.39	□□□□□ -0.59
TRIM6-210	ENST00000511284	LMO7	Q8WWI1	1683 aa		11.39	□□□□□ -0.59
TRIM6-210	ENST00000511284	COL5A2	P05997	1499 aa	Predicted RBP	11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	MON2	Q7Z3U7	1717 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284		A0A0G2JS52	829 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	MYT1	Q01538	1121 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	EZH2	Q15910	746 aa	Known RBP	11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	LARP1	Q6PKG0	1096 aa	Known RBP	11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	NME9	Q86XW9	330 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	TCP11L2	Q8N4U5	519 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	SPON1	Q9HCB6	807 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	ABCC6	O95255	1503 aa		11.38	□□□□□ -0.59
TRIM6-210	ENST00000511284	DISP2	A7MBM2	1401 aa		11.37	□□□□□ -0.59
TRIM6-210	ENST00000511284	CRB1	P82279	1406 aa		11.37	□□□□□ -0.59
TRIM6-210	ENST00000511284	C11orf95	C9JLR9	678 aa	Predicted RBP	11.37	□□□□□ -0.59
TRIM6-210	ENST00000511284	AXIN2	Q9Y2T1	843 aa		11.37	□□□□□ -0.59
TRIM6-210	ENST00000511284	USP54	Q70EL1	1684 aa		11.36	□□□□□ -0.59
TRIM6-210	ENST00000511284	WDR17	Q8IZU2	1322 aa		11.36	□□□□□ -0.59
TRIM6-210	ENST00000511284	OVOS2	A0A0J9YW53	1432 aa		11.36	□□□□□ -0.59
TRIM6-210	ENST00000511284	OVOS2	Q6IE36	1432 aa		11.36	□□□□□ -0.59
TRIM6-210	ENST00000511284	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.36	□□□□□ -0.59
TRIM6-210	ENST00000511284	NFAT5	O94916	1531 aa		11.35	□□□□□ -0.59
TRIM6-210	ENST00000511284	CHD4	Q14839	1912 aa		11.35	□□□□□ -0.59
TRIM6-210	ENST00000511284	FYB1	O15117	783 aa		11.35	□□□□□ -0.59
TRIM6-210	ENST00000511284	COG3	Q96JB2	828 aa		11.35	□□□□□ -0.59
TRIM6-210	ENST00000511284	THSD7A	Q9UPZ6	1657 aa		11.34	□□□□□ -0.59
TRIM6-210	ENST00000511284	KCNQ2	O43526	872 aa		11.34	□□□□□ -0.59
TRIM6-210	ENST00000511284	GIGYF1	O75420	1035 aa	Predicted RBP	11.34	□□□□□ -0.59
TRIM6-210	ENST00000511284	HSPA5	P11021	654 aa	Known RBP	11.34	□□□□□ -0.59
TRIM6-210	ENST00000511284	CARD10	Q9BWT7	1032 aa		11.34	□□□□□ -0.59
TRIM6-210	ENST00000511284	TNS1	Q9HBL0	1735 aa	Known RBP	11.34	□□□□□ -0.59
TRIM6-210	ENST00000511284	FAM196A	Q6ZSG2	479 aa		11.33	□□□□□ -0.6
TRIM6-210	ENST00000511284	TOM1L2	Q6ZVM7	507 aa		11.33	□□□□□ -0.6
TRIM6-210	ENST00000511284	IP6K1	Q92551	441 aa		11.33	□□□□□ -0.6
TRIM6-210	ENST00000511284	CAMKK2	Q96RR4	588 aa		11.33	□□□□□ -0.6
TRIM6-210	ENST00000511284	USP35	Q9P2H5	1018 aa		11.33	□□□□□ -0.6
TRIM6-210	ENST00000511284	COL18A1	P39060	1754 aa		11.33	□□□□□ -0.6
TRIM6-210	ENST00000511284	CCDC7	Q96M83	1385 aa		11.32	□□□□□ -0.6
TRIM6-210	ENST00000511284	ZBTB7C	A1YPR0	619 aa		11.32	□□□□□ -0.6
TRIM6-210	ENST00000511284	PDE3B	Q13370	1112 aa		11.32	□□□□□ -0.6
TRIM6-210	ENST00000511284	CARD14	Q9BXL6	1004 aa		11.32	□□□□□ -0.6
TRIM6-210	ENST00000511284	ERBB3	P21860	1342 aa		11.32	□□□□□ -0.6
TRIM6-210	ENST00000511284	SOX12	O15370	315 aa		11.31	□□□□□ -0.6
TRIM6-210	ENST00000511284	FAM182B	Q5T319	152 aa		11.31	□□□□□ -0.6
TRIM6-210	ENST00000511284	NBPF14	Q5TI25	921 aa		11.31	□□□□□ -0.6
TRIM6-210	ENST00000511284	KIF24	Q5T7B8	1368 aa		11.3	□□□□□ -0.6
TRIM6-210	ENST00000511284	PARD3	Q8TEW0	1356 aa		11.3	□□□□□ -0.6
TRIM6-210	ENST00000511284	CSB-PGBD3	P0DP91	1061 aa		11.3	□□□□□ -0.6
TRIM6-210	ENST00000511284	BCL9	O00512	1426 aa		11.29	□□□□□ -0.6
TRIM6-210	ENST00000511284	DDB1	Q16531	1140 aa		11.29	□□□□□ -0.6
TRIM6-210	ENST00000511284	GGNBP2	Q9H3C7	697 aa		11.29	□□□□□ -0.6
TRIM6-210	ENST00000511284	CGNL1	Q0VF96	1302 aa		11.29	□□□□□ -0.6
TRIM6-210	ENST00000511284	MAP3K19	Q56UN5	1328 aa		11.29	□□□□□ -0.6
TRIM6-210	ENST00000511284	RTL1	A6NKG5	1358 aa		11.28	□□□□□ -0.6
TRIM6-210	ENST00000511284	HOXC9	P31274	260 aa		11.28	□□□□□ -0.6
TRIM6-210	ENST00000511284	ANKRD24	Q8TF21	1146 aa		11.28	□□□□□ -0.6
TRIM6-210	ENST00000511284	RREB1	Q92766	1687 aa		11.27	□□□□□ -0.6
TRIM6-210	ENST00000511284	EXOC5	O00471	708 aa		11.27	□□□□□ -0.61
TRIM6-210	ENST00000511284	APBA3	O96018	575 aa		11.27	□□□□□ -0.61
TRIM6-210	ENST00000511284	AMPH	P49418	695 aa		11.27	□□□□□ -0.61
TRIM6-210	ENST00000511284	NSD3	Q9BZ95	1437 aa		11.26	□□□□□ -0.61
TRIM6-210	ENST00000511284	NUP188	Q5SRE5	1749 aa		11.26	□□□□□ -0.61
TRIM6-210	ENST00000511284	TRIM37	O94972	964 aa		11.26	□□□□□ -0.61
TRIM6-210	ENST00000511284	IL2RB	P14784	551 aa		11.26	□□□□□ -0.61
TRIM6-210	ENST00000511284	NLRP2	Q9NX02	1062 aa		11.26	□□□□□ -0.61
TRIM6-210	ENST00000511284	PARP4	Q9UKK3	1724 aa	Known RBP	11.26	□□□□□ -0.61
TRIM6-210	ENST00000511284	MYOM1	P52179	1685 aa		11.25	□□□□□ -0.61
TRIM6-210	ENST00000511284	PANK3	Q9H999	370 aa		11.25	□□□□□ -0.61
TRIM6-210	ENST00000511284	INSR	P06213	1382 aa		11.25	□□□□□ -0.61
TRIM6-210	ENST00000511284	OVOS2	A0A0G2JMS6	1433 aa		11.25	□□□□□ -0.61
TRIM6-210	ENST00000511284	FBLN1	P23142	703 aa		11.24	□□□□□ -0.61
TRIM6-210	ENST00000511284	RRS1	Q15050	365 aa	Known RBP	11.24	□□□□□ -0.61
TRIM6-210	ENST00000511284	MARCH10	Q8NA82	808 aa	Predicted RBP	11.24	□□□□□ -0.61
TRIM6-210	ENST00000511284	NSD2	O96028	1365 aa		11.24	□□□□□ -0.61
TRIM6-210	ENST00000511284	FLT4	P35916	1363 aa		11.24	□□□□□ -0.61
TRIM6-210	ENST00000511284	PLSCR1	O15162	318 aa		11.23	□□□□□ -0.61
TRIM6-210	ENST00000511284	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.23	□□□□□ -0.61
TRIM6-210	ENST00000511284	WASHC2A	Q641Q2	1341 aa		11.23	□□□□□ -0.61
TRIM6-210	ENST00000511284	KIF7	Q2M1P5	1343 aa		11.22	□□□□□ -0.61
TRIM6-210	ENST00000511284	TNS2	Q63HR2	1409 aa		11.22	□□□□□ -0.61
TRIM6-210	ENST00000511284	POLR3GL	Q9BT43	218 aa		11.22	□□□□□ -0.61
TRIM6-210	ENST00000511284	LTN1	O94822	1766 aa		11.21	□□□□□ -0.61
TRIM6-210	ENST00000511284	SMG6	Q86US8	1419 aa	Known RBP	11.21	□□□□□ -0.61
TRIM6-210	ENST00000511284	HSP90AB2P	Q58FF8	381 aa		11.21	□□□□□ -0.61
TRIM6-210	ENST00000511284	POLK	Q9UBT6	870 aa		11.21	□□□□□ -0.61
TRIM6-210	ENST00000511284	KNSTRN	Q9Y448	316 aa		11.21	□□□□□ -0.61
TRIM6-210	ENST00000511284	LRRC37A3	O60309	1634 aa		11.2	□□□□□ -0.62
TRIM6-210	ENST00000511284	PER1	O15534	1290 aa	Predicted RBP	11.2	□□□□□ -0.62
TRIM6-210	ENST00000511284	NBPF6	Q5VWK0	638 aa		11.2	□□□□□ -0.62
TRIM6-210	ENST00000511284	NBPF4	Q96M43	638 aa		11.2	□□□□□ -0.62
TRIM6-210	ENST00000511284	SYT17	Q9BSW7	474 aa		11.2	□□□□□ -0.62
TRIM6-210	ENST00000511284	RGPD5	Q99666	1765 aa		11.19	□□□□□ -0.62
TRIM6-210	ENST00000511284	PEAK1	Q9H792	1746 aa		11.19	□□□□□ -0.62
TRIM6-210	ENST00000511284	CAPN15	O75808	1086 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms