RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
GPNMB-208ENST00000470994 HRCP23327 699 aa10.32□□□□□ -0.76
GPNMB-208ENST00000470994 MEIOBQ8N635 442 aa10.32□□□□□ -0.76
GPNMB-208ENST00000470994 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
GPNMB-208ENST00000470994 ZMYND10O75800 440 aa10.31□□□□□ -0.76
GPNMB-208ENST00000470994 NR3C2P08235 984 aa10.31□□□□□ -0.76
GPNMB-208ENST00000470994 NBPF14Q5TI25 921 aa10.31□□□□□ -0.76
GPNMB-208ENST00000470994 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
GPNMB-208ENST00000470994 RIMBP3CA6NJZ7 1639 aa10.3□□□□□ -0.76
GPNMB-208ENST00000470994 RIMBP3BA6NNM3 1639 aa10.3□□□□□ -0.76
GPNMB-208ENST00000470994 RIMBP3Q9UFD9 1639 aa10.3□□□□□ -0.76
GPNMB-208ENST00000470994 GRM5P41594 1212 aa10.29□□□□□ -0.76
GPNMB-208ENST00000470994 RIC3Q7Z5B4 369 aa10.29□□□□□ -0.76
GPNMB-208ENST00000470994 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
GPNMB-208ENST00000470994 EIF4G3O43432 1585 aaKnown RBP10.28□□□□□ -0.76
GPNMB-208ENST00000470994 RNF225M0QZC1 329 aaPredicted RBP10.28□□□□□ -0.76
GPNMB-208ENST00000470994 FSHRP23945 695 aa10.28□□□□□ -0.76
GPNMB-208ENST00000470994 KCNMA1Q12791 1236 aa10.28□□□□□ -0.76
GPNMB-208ENST00000470994 TSC1Q92574 1164 aa10.28□□□□□ -0.76
GPNMB-208ENST00000470994 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
GPNMB-208ENST00000470994 EMILIN1Q9Y6C2 1016 aa10.28□□□□□ -0.76
GPNMB-208ENST00000470994 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.27□□□□□ -0.77
GPNMB-208ENST00000470994 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
GPNMB-208ENST00000470994 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.77
GPNMB-208ENST00000470994 FGD5Q6ZNL6 1462 aa10.27□□□□□ -0.77
GPNMB-208ENST00000470994 SOS2Q07890 1332 aaPredicted RBP10.27□□□□□ -0.77
GPNMB-208ENST00000470994 NUTM2BA6NNL0 878 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-208ENST00000470994 NUTM2EB1AL46 878 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-208ENST00000470994 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-208ENST00000470994 NUTM2AQ8IVF1 878 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-208ENST00000470994 PARP9Q8IXQ6 854 aa10.26□□□□□ -0.77
GPNMB-208ENST00000470994 C1QTNF2Q9BXJ5 285 aa10.26□□□□□ -0.77
GPNMB-208ENST00000470994 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
GPNMB-208ENST00000470994 PRDM2Q13029 1718 aa10.25□□□□□ -0.77
GPNMB-208ENST00000470994 CSPP1Q1MSJ5 1256 aa10.25□□□□□ -0.77
GPNMB-208ENST00000470994 HELBQ8NG08 1087 aaPredicted RBP10.25□□□□□ -0.77
GPNMB-208ENST00000470994 CABLES1Q8TDN4 633 aa10.25□□□□□ -0.77
GPNMB-208ENST00000470994 DNMT3LQ9UJW3 386 aa10.25□□□□□ -0.77
GPNMB-208ENST00000470994 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
GPNMB-208ENST00000470994 LOC100996750A0A140TA64 210 aa10.24□□□□□ -0.77
GPNMB-208ENST00000470994 TRMT44Q8IYL2 757 aaKnown RBP10.24□□□□□ -0.77
GPNMB-208ENST00000470994 CCDC116Q8IYX3 515 aa10.24□□□□□ -0.77
GPNMB-208ENST00000470994 ZC3H15Q8WU90 426 aaKnown RBP10.24□□□□□ -0.77
GPNMB-208ENST00000470994 KRTAP4-6Q9BYQ5 205 aa10.24□□□□□ -0.77
GPNMB-208ENST00000470994 PER1O15534 1290 aaPredicted RBP10.23□□□□□ -0.77
GPNMB-208ENST00000470994 GRIN2BQ13224 1484 aa10.23□□□□□ -0.77
GPNMB-208ENST00000470994 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
GPNMB-208ENST00000470994 CUX1P39880 1505 aa10.23□□□□□ -0.77
GPNMB-208ENST00000470994 TTLL8A6PVC2 850 aa10.22□□□□□ -0.77
GPNMB-208ENST00000470994 SH3RF1Q7Z6J0 888 aa10.22□□□□□ -0.77
GPNMB-208ENST00000470994 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.77
GPNMB-208ENST00000470994 PGPEP1Q9NXJ5 209 aa10.22□□□□□ -0.77
GPNMB-208ENST00000470994 MAGEB6P1A0A0J9YX57 407 aa10.21□□□□□ -0.77
GPNMB-208ENST00000470994 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
GPNMB-208ENST00000470994 TMEM151AQ8N4L1 468 aa10.21□□□□□ -0.77
GPNMB-208ENST00000470994 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
GPNMB-208ENST00000470994 GAPVD1Q14C86 1478 aa10.19□□□□□ -0.78
GPNMB-208ENST00000470994 TRIM66O15016 1216 aa10.19□□□□□ -0.78
GPNMB-208ENST00000470994 SUZ12Q15022 739 aaKnown RBP10.19□□□□□ -0.78
GPNMB-208ENST00000470994 SH3BP5LQ7L8J4 393 aa10.19□□□□□ -0.78
GPNMB-208ENST00000470994 MAGI1Q96QZ7 1491 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-208ENST00000470994 GDF11O95390 407 aa10.18□□□□□ -0.78
GPNMB-208ENST00000470994 PTSQ03393 145 aa10.18□□□□□ -0.78
GPNMB-208ENST00000470994 AK7Q96M32 723 aa10.18□□□□□ -0.78
GPNMB-208ENST00000470994 CNTNAP3BQ96NU0 1288 aa10.18□□□□□ -0.78
GPNMB-208ENST00000470994 CNTNAP3Q9BZ76 1288 aa10.18□□□□□ -0.78
GPNMB-208ENST00000470994 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
GPNMB-208ENST00000470994 CHD1O14646 1710 aa10.17□□□□□ -0.78
GPNMB-208ENST00000470994 CARD14Q9BXL6 1004 aa10.17□□□□□ -0.78
GPNMB-208ENST00000470994 LILRB3O75022 631 aa10.16□□□□□ -0.78
GPNMB-208ENST00000470994 RASSF7Q02833 373 aa10.16□□□□□ -0.78
GPNMB-208ENST00000470994 QPCTQ16769 361 aa10.16□□□□□ -0.78
GPNMB-208ENST00000470994 MYSM1Q5VVJ2 828 aa10.16□□□□□ -0.78
GPNMB-208ENST00000470994 NANOS1Q8WY41 292 aaKnown RBP10.16□□□□□ -0.78
GPNMB-208ENST00000470994 LIMD1Q9UGP4 676 aa10.16□□□□□ -0.78
GPNMB-208ENST00000470994 CDV3Q9UKY7 258 aaKnown RBP10.16□□□□□ -0.78
GPNMB-208ENST00000470994 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
GPNMB-208ENST00000470994 COL25A1Q9BXS0 654 aaPredicted RBP10.15□□□□□ -0.78
GPNMB-208ENST00000470994 ADAMTS8Q9UP79 889 aa10.15□□□□□ -0.78
GPNMB-208ENST00000470994 SYNJ1O43426 1573 aa10.14□□□□□ -0.79
GPNMB-208ENST00000470994 GSK3AP49840 483 aa10.14□□□□□ -0.79
GPNMB-208ENST00000470994 KRT76Q01546 638 aa10.14□□□□□ -0.79
GPNMB-208ENST00000470994 DHX9Q08211 1270 aaKnown RBP10.14□□□□□ -0.79
GPNMB-208ENST00000470994 PPP1R26Q5T8A7 1209 aaPredicted RBP10.14□□□□□ -0.79
GPNMB-208ENST00000470994 SVOPQ8N4V2 548 aa10.14□□□□□ -0.79
GPNMB-208ENST00000470994 SLC10A4Q96EP9 437 aa10.14□□□□□ -0.79
GPNMB-208ENST00000470994 FIGNL2A6NMB9 653 aa10.13□□□□□ -0.79
GPNMB-208ENST00000470994 SPINT1O43278 529 aa10.13□□□□□ -0.79
GPNMB-208ENST00000470994 ERFEQ4G0M1 354 aa10.13□□□□□ -0.79
GPNMB-208ENST00000470994 Q6ZVU0 165 aa10.13□□□□□ -0.79
GPNMB-208ENST00000470994 CCDC155Q8N6L0 562 aa10.13□□□□□ -0.79
GPNMB-208ENST00000470994 GPR161Q8N6U8 529 aaKnown RBP10.13□□□□□ -0.79
GPNMB-208ENST00000470994 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
GPNMB-208ENST00000470994 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
GPNMB-208ENST00000470994 ARHGAP9Q9BRR9 750 aa10.11□□□□□ -0.79
GPNMB-208ENST00000470994 CLASP1Q7Z460 1538 aa10.11□□□□□ -0.79
GPNMB-208ENST00000470994 PDXDC2PQ6P474 469 aa10.1□□□□□ -0.79
GPNMB-208ENST00000470994 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
GPNMB-208ENST00000470994 WDR97A6NE52 1622 aa10.1□□□□□ -0.79
GPNMB-208ENST00000470994 ITGA6P23229 1130 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms