RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 PRKRIP1Q9H875 184 aaPredicted RBP18.03■□□□□ 0.48
ATPAF2-203ENST00000465337 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
ATPAF2-203ENST00000465337 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
ATPAF2-203ENST00000465337 CRYBG1Q9Y4K1 1723 aa18.03■□□□□ 0.48
ATPAF2-203ENST00000465337 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.48
ATPAF2-203ENST00000465337 MTHFSP49914 203 aa18.02■□□□□ 0.48
ATPAF2-203ENST00000465337 SMG6Q86US8 1419 aaKnown RBP18.02■□□□□ 0.48
ATPAF2-203ENST00000465337 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 AXIN2Q9Y2T1 843 aa18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 ANKRD26Q9UPS8 1709 aa18.01■□□□□ 0.47
ATPAF2-203ENST00000465337 ERBB3P21860 1342 aa18■□□□□ 0.47
ATPAF2-203ENST00000465337 MYBBP1AQ9BQG0 1328 aaKnown RBP18■□□□□ 0.47
ATPAF2-203ENST00000465337 CSB-PGBD3P0DP91 1061 aa18■□□□□ 0.47
ATPAF2-203ENST00000465337 ABCA3Q99758 1704 aa18■□□□□ 0.47
ATPAF2-203ENST00000465337 ANKRD24Q8TF21 1146 aa17.99■□□□□ 0.47
ATPAF2-203ENST00000465337 CDCA7Q9BWT1 371 aaPredicted RBP17.99■□□□□ 0.47
ATPAF2-203ENST00000465337 CARD10Q9BWT7 1032 aa17.99■□□□□ 0.47
ATPAF2-203ENST00000465337 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
ATPAF2-203ENST00000465337 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
ATPAF2-203ENST00000465337 FBLN1P23142 703 aa17.98■□□□□ 0.47
ATPAF2-203ENST00000465337 RBM6P78332 1123 aaKnown RBP17.98■□□□□ 0.47
ATPAF2-203ENST00000465337 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
ATPAF2-203ENST00000465337 GJD4Q96KN9 370 aaPredicted RBP17.98■□□□□ 0.47
ATPAF2-203ENST00000465337 CDK12Q9NYV4 1490 aaPredicted RBP17.97■□□□□ 0.47
ATPAF2-203ENST00000465337 TOM1L2Q6ZVM7 507 aa17.97■□□□□ 0.47
ATPAF2-203ENST00000465337 STRN4Q9NRL3 753 aa17.97■□□□□ 0.47
ATPAF2-203ENST00000465337 NWD2Q9ULI1 1742 aa17.97■□□□□ 0.47
ATPAF2-203ENST00000465337 CRB1P82279 1406 aa17.97■□□□□ 0.47
ATPAF2-203ENST00000465337 CAMTA1Q9Y6Y1 1673 aa17.96■□□□□ 0.47
ATPAF2-203ENST00000465337 COL5A2P05997 1499 aaPredicted RBP17.96■□□□□ 0.47
ATPAF2-203ENST00000465337 SPATA31A5Q5VU36 1347 aa17.96■□□□□ 0.46
ATPAF2-203ENST00000465337 SPATA31A7Q8IWB4 1347 aa17.96■□□□□ 0.46
ATPAF2-203ENST00000465337 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 ONECUT3O60422 494 aaPredicted RBP17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 RXRBP28702 533 aa17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 TCP11L2Q8N4U5 519 aa17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 ATRNO75882 1429 aa17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 SPATA31A1Q5TZJ5 1347 aa17.95■□□□□ 0.46
ATPAF2-203ENST00000465337 LMO7Q8WWI1 1683 aa17.94■□□□□ 0.46
ATPAF2-203ENST00000465337 DIEXFQ68CQ4 756 aaKnown RBP17.94■□□□□ 0.46
ATPAF2-203ENST00000465337 NLRP2Q9NX02 1062 aa17.94■□□□□ 0.46
ATPAF2-203ENST00000465337 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
ATPAF2-203ENST00000465337 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
ATPAF2-203ENST00000465337 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
ATPAF2-203ENST00000465337 EIF4A2Q14240 407 aaKnown RBP17.92■□□□□ 0.46
ATPAF2-203ENST00000465337 PNNQ9H307 717 aaKnown RBP17.92■□□□□ 0.46
ATPAF2-203ENST00000465337 COL18A1P39060 1754 aa17.91■□□□□ 0.46
ATPAF2-203ENST00000465337 IL13P35225 146 aa17.91■□□□□ 0.46
ATPAF2-203ENST00000465337 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.9■□□□□ 0.46
ATPAF2-203ENST00000465337 LTV1Q96GA3 475 aaPredicted RBP17.9■□□□□ 0.46
ATPAF2-203ENST00000465337 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
ATPAF2-203ENST00000465337 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
ATPAF2-203ENST00000465337 MAP2P11137 1827 aaKnown RBP17.88■□□□□ 0.45
ATPAF2-203ENST00000465337 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
ATPAF2-203ENST00000465337 EYA1Q99502 592 aa17.88■□□□□ 0.45
ATPAF2-203ENST00000465337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.88■□□□□ 0.45
ATPAF2-203ENST00000465337 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
ATPAF2-203ENST00000465337 PLCH1Q4KWH8 1693 aa17.87■□□□□ 0.45
ATPAF2-203ENST00000465337 LTN1O94822 1766 aa17.87■□□□□ 0.45
ATPAF2-203ENST00000465337 IL2RBP14784 551 aa17.87■□□□□ 0.45
ATPAF2-203ENST00000465337 FCHSD2O94868 740 aa17.86■□□□□ 0.45
ATPAF2-203ENST00000465337 POTEAQ6S8J7 498 aa17.86■□□□□ 0.45
ATPAF2-203ENST00000465337 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
ATPAF2-203ENST00000465337 TATP17735 454 aaPredicted RBP17.85■□□□□ 0.45
ATPAF2-203ENST00000465337 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
ATPAF2-203ENST00000465337 NCAPD2Q15021 1401 aa17.84■□□□□ 0.45
ATPAF2-203ENST00000465337 EXOC5O00471 708 aa17.84■□□□□ 0.45
ATPAF2-203ENST00000465337 NEFMP07197 916 aa17.84■□□□□ 0.45
ATPAF2-203ENST00000465337 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
ATPAF2-203ENST00000465337 FAM208AQ9UK61 1670 aaKnown RBP17.83■□□□□ 0.45
ATPAF2-203ENST00000465337 KDRP35968 1356 aa17.83■□□□□ 0.45
ATPAF2-203ENST00000465337 NRAPQ86VF7 1730 aa17.83■□□□□ 0.44
ATPAF2-203ENST00000465337 PEAK1Q9H792 1746 aa17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 WDR43Q15061 677 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 SPG7Q9UQ90 795 aa17.82■□□□□ 0.44
ATPAF2-203ENST00000465337 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
ATPAF2-203ENST00000465337 DDB1Q16531 1140 aa17.81■□□□□ 0.44
ATPAF2-203ENST00000465337 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
ATPAF2-203ENST00000465337 SULT6B1Q6IMI4 303 aa17.81■□□□□ 0.44
ATPAF2-203ENST00000465337 SEPT12Q8IYM1 358 aa17.81■□□□□ 0.44
ATPAF2-203ENST00000465337 COL3A1P02461 1466 aaPredicted RBP17.81■□□□□ 0.44
ATPAF2-203ENST00000465337 A0A0G2JS52 829 aa17.79■□□□□ 0.44
ATPAF2-203ENST00000465337 MYT1Q01538 1121 aa17.79■□□□□ 0.44
ATPAF2-203ENST00000465337 ZCRB1Q8TBF4 217 aaKnown RBP17.79■□□□□ 0.44
ATPAF2-203ENST00000465337 MRS2Q9HD23 443 aa17.79■□□□□ 0.44
ATPAF2-203ENST00000465337 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
ATPAF2-203ENST00000465337 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
ATPAF2-203ENST00000465337 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms