RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Hecw1Q8K4P8 1604 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Myom2Q14BI5 1463 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Exoc6bA6H5Z3 810 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Strn4P58404 760 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Plekhh1Q80TI1 1356 aa19.05■□□□□ 0.64
Upf1-202ENSMUST00000215817 Map4k4P97820 1233 aaKnown RBP19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Neurod6P48986 337 aa19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Tceal9Q9DD24 104 aa19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Abca6Q8K441 1624 aa19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Aplp1Q03157 653 aa19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Adgrb3Q80ZF8 1522 aa19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Klhdc4Q921I2 584 aa19.04■□□□□ 0.64
Upf1-202ENSMUST00000215817 Hoxc9P09633 260 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Kif14L0N7N1 1674 aaKnown RBP19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Astn2Q80Z10 1352 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 MecomP14404 1042 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Flad1Q8R123 492 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Knl1Q66JQ7 1612 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Dot1lQ6XZL8 1540 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Kidins220E9Q9B7 1793 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Kif24Q6NWW5 1356 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Znf326O88291 580 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Smim5Q8BT42 78 aa19.03■□□□□ 0.64
Upf1-202ENSMUST00000215817 Ccdc171E9Q1U1 1324 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 GorabQ8BRM2 368 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 EspnQ9ET47 871 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 Cdc42bpbQ7TT50 1713 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 Ttc37F8VPK0 1563 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 RereQ80TZ9 1558 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 Zmym3Q9JLM4 1370 aa19.02■□□□□ 0.64
Upf1-202ENSMUST00000215817 Myo3aQ8K3H5 1613 aa19.02■□□□□ 0.63
Upf1-202ENSMUST00000215817 Eif2s2Q99L45 331 aaKnown RBP19.01■□□□□ 0.63
Upf1-202ENSMUST00000215817 Ccnl1Q52KE7 532 aaKnown RBP19.01■□□□□ 0.63
Upf1-202ENSMUST00000215817 Tulp4Q9JIL5 1547 aa19■□□□□ 0.63
Upf1-202ENSMUST00000215817 CrklP47941 303 aa19■□□□□ 0.63
Upf1-202ENSMUST00000215817 Sytl4Q9R0Q1 673 aa19■□□□□ 0.63
Upf1-202ENSMUST00000215817 Ddb1Q3U1J4 1140 aaKnown RBP19■□□□□ 0.63
Upf1-202ENSMUST00000215817 Rapgef4Q9EQZ6 1011 aa19■□□□□ 0.63
Upf1-202ENSMUST00000215817 AnkarA2RT91 1465 aa18.99■□□□□ 0.63
Upf1-202ENSMUST00000215817 Kiaa0556Q8C753 1610 aa18.99■□□□□ 0.63
Upf1-202ENSMUST00000215817 Abca9Q8K449 1623 aa18.99■□□□□ 0.63
Upf1-202ENSMUST00000215817 Jmjd4Q8BFT6 427 aa18.99■□□□□ 0.63
Upf1-202ENSMUST00000215817 PaskQ8CEE6 1383 aa18.99■□□□□ 0.63
Upf1-202ENSMUST00000215817 NexnQ7TPW1 607 aa18.98■□□□□ 0.63
Upf1-202ENSMUST00000215817 Tns3Q5SSZ5 1440 aa18.98■□□□□ 0.63
Upf1-202ENSMUST00000215817 Pprc1Q6NZN1 1644 aa18.97■□□□□ 0.63
Upf1-202ENSMUST00000215817 Stard3nlQ9DCI3 235 aa18.97■□□□□ 0.63
Upf1-202ENSMUST00000215817 Ttc19Q8CC21 365 aa18.97■□□□□ 0.63
Upf1-202ENSMUST00000215817 AdgbG3UZ78 1657 aa18.97■□□□□ 0.63
Upf1-202ENSMUST00000215817 Ankib1Q6ZPS6 1085 aa18.97■□□□□ 0.63
Upf1-202ENSMUST00000215817 Chpf2Q3UU43 768 aa18.96■□□□□ 0.63
Upf1-202ENSMUST00000215817 Arhgef1Q61210 920 aaKnown RBP18.96■□□□□ 0.63
Upf1-202ENSMUST00000215817 DekQ7TNV0 380 aaKnown RBP18.96■□□□□ 0.63
Upf1-202ENSMUST00000215817 Mfap1aC0HKD8 439 aaKnown RBP18.96■□□□□ 0.63
Upf1-202ENSMUST00000215817 Mfap1bC0HKD9 439 aaKnown RBP18.96■□□□□ 0.63
Upf1-202ENSMUST00000215817 ThemisQ8BGW0 636 aa18.96■□□□□ 0.63
Upf1-202ENSMUST00000215817 Cdc42bpgQ80UW5 1551 aa18.95■□□□□ 0.62
Upf1-202ENSMUST00000215817 AU015836B2RUM3 263 aa18.95■□□□□ 0.62
Upf1-202ENSMUST00000215817 NgdnQ9DB96 315 aaKnown RBP18.95■□□□□ 0.62
Upf1-202ENSMUST00000215817 Mapk8ip1Q9WVI9 707 aa18.95■□□□□ 0.62
Upf1-202ENSMUST00000215817 Trim34aQ99PP6 485 aa18.95■□□□□ 0.62
Upf1-202ENSMUST00000215817 Pola1P33609 1465 aa18.94■□□□□ 0.62
Upf1-202ENSMUST00000215817 Klf15Q9EPW2 415 aa18.94■□□□□ 0.62
Upf1-202ENSMUST00000215817 Sbno1Q689Z5 1390 aa18.94■□□□□ 0.62
Upf1-202ENSMUST00000215817 Cul7Q8VE73 1689 aa18.94■□□□□ 0.62
Upf1-202ENSMUST00000215817 Hspa1lP16627 641 aa18.93■□□□□ 0.62
Upf1-202ENSMUST00000215817 Prim1P20664 417 aa18.93■□□□□ 0.62
Upf1-202ENSMUST00000215817 Uspl1Q3ULM6 1089 aa18.93■□□□□ 0.62
Upf1-202ENSMUST00000215817 Ankrd13dQ6PD24 605 aa18.93■□□□□ 0.62
Upf1-202ENSMUST00000215817 Ahdc1Q6PAL7 1594 aaKnown RBP18.93■□□□□ 0.62
Upf1-202ENSMUST00000215817 CltcQ68FD5 1675 aaKnown RBP18.92■□□□□ 0.62
Upf1-202ENSMUST00000215817 Snap23O09044 210 aa18.92■□□□□ 0.62
Upf1-202ENSMUST00000215817 Neurl4Q5NCX5 1563 aa18.91■□□□□ 0.62
Upf1-202ENSMUST00000215817 Pde4bB1AWC9 736 aa18.91■□□□□ 0.62
Upf1-202ENSMUST00000215817 Pde3bQ61409 1100 aa18.91■□□□□ 0.62
Upf1-202ENSMUST00000215817 Spryd3E9Q9B3 442 aa18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 Card10P58660 1021 aa18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 MpndQ3TV65 487 aa18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 Plekhm2Q80TQ5 1018 aa18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 Lamc1P02468 1607 aaKnown RBP18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 L3mbtl2P59178 703 aa18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 Amotl1Q9D4H4 968 aa18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 Nolc1E9Q5C9 702 aaKnown RBP18.9■□□□□ 0.62
Upf1-202ENSMUST00000215817 ShprhQ7TPQ3 1674 aa18.89■□□□□ 0.61
Upf1-202ENSMUST00000215817 PnnO35691 725 aaKnown RBP18.89■□□□□ 0.61
Upf1-202ENSMUST00000215817 Nsfl1cQ9CZ44 370 aaKnown RBP18.89■□□□□ 0.61
Upf1-202ENSMUST00000215817 MccE9PWI3 1003 aa18.88■□□□□ 0.61
Upf1-202ENSMUST00000215817 Plekhg1F6S200 1446 aa18.88■□□□□ 0.61
Upf1-202ENSMUST00000215817 Pik3r4Q8VD65 1358 aa18.88■□□□□ 0.61
Upf1-202ENSMUST00000215817 Cwc27Q3TKY6 469 aa18.88■□□□□ 0.61
Upf1-202ENSMUST00000215817 PtprmP28828 1452 aa18.88■□□□□ 0.61
Upf1-202ENSMUST00000215817 Nlrp3Q8R4B8 1033 aa18.88■□□□□ 0.61
Upf1-202ENSMUST00000215817 Brinp3Q499E0 766 aa18.87■□□□□ 0.61
Upf1-202ENSMUST00000215817 Fhod3Q76LL6 1578 aa18.87■□□□□ 0.61
Upf1-202ENSMUST00000215817 Kcnh8P59111 1102 aa18.87■□□□□ 0.61
Upf1-202ENSMUST00000215817 Maco1Q7TQE6 664 aaKnown RBP18.87■□□□□ 0.61
Upf1-202ENSMUST00000215817 Nip7Q9CXK8 180 aaKnown RBP18.87■□□□□ 0.61
Upf1-202ENSMUST00000215817 Fkbp5Q64378 456 aa18.87■□□□□ 0.61
Upf1-202ENSMUST00000215817 Gnai2P08752 355 aaKnown RBP18.86■□□□□ 0.61
Upf1-202ENSMUST00000215817 Lrrc59Q922Q8 307 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms