RNA–Protein interactions for RNA: ENSMUST00000167755.2

Trim9-203, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-203ENSMUST00000167755 Klhdc4Q921I2 584 aa11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 Mapk8ip1Q9WVI9 707 aa11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 R3hcc1Q8BSI6 488 aa11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 Trim34aQ99PP6 485 aa11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 CrcpO35427 148 aa11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 Map4k4P97820 1233 aaKnown RBP11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 Rapgef4Q9EQZ6 1011 aa11.26□□□□□ -0.61
Trim9-203ENSMUST00000167755 Dot1lQ6XZL8 1540 aa11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Noc3lQ8VI84 807 aaKnown RBP11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Klc3Q91W40 508 aa11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 NgdnQ9DB96 315 aaKnown RBP11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Cgnl1Q6AW69 1298 aa11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Duxf3A0A0N4SV92 674 aa11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Ppp1r3fQ9JIG4 799 aa11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Ell2Q3UKU1 639 aa11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Ccdc47Q9D024 483 aaKnown RBP11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 PtmsQ9D0J8 101 aaKnown RBP11.25□□□□□ -0.61
Trim9-203ENSMUST00000167755 Frmpd2A0A140LI67 1392 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Pde4bB1AWC9 736 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Pcmtd1P59913 357 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Slain2Q8CI08 581 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Mast1Q9R1L5 1570 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 SkilQ60665 675 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Flad1Q8R123 492 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Cfap74Q3UY96 1578 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 SlkO54988 1233 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Ankib1Q6ZPS6 1085 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Kri1Q8VDQ9 704 aaKnown RBP11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Kif18aQ91WD7 886 aa11.24□□□□□ -0.61
Trim9-203ENSMUST00000167755 Lamc1P02468 1607 aaKnown RBP11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Nkx1-2P42580 305 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Q9D2X8 372 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Rabep1O35551 862 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Ppp1r15aP17564 657 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Q4VA45 678 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Atl3Q91YH5 541 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Gm16486A0A1D5RMD1 1434 aa11.23□□□□□ -0.61
Trim9-203ENSMUST00000167755 Mbd5B1AYB6 1498 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Pcdh10E9PXQ7 1057 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Rapgef3Q8VCC8 918 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Dnajc10Q9DC23 793 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Fchsd2Q3USJ8 740 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Qtrt2B8ZXI1 415 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Plekhm2Q80TQ5 1018 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Amotl2Q8K371 772 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Naip7Q9JIB3 1402 aa11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Rrbp1Q99PL5 1605 aaKnown RBP11.22□□□□□ -0.61
Trim9-203ENSMUST00000167755 Cplx2P84086 134 aa11.21□□□□□ -0.61
Trim9-203ENSMUST00000167755 Krt82Q99M74 516 aa11.21□□□□□ -0.61
Trim9-203ENSMUST00000167755 AU022751B1B0V2 589 aa11.21□□□□□ -0.61
Trim9-203ENSMUST00000167755 UvssaQ9D479 717 aa11.21□□□□□ -0.61
Trim9-203ENSMUST00000167755 Gm21969J3QJZ1 289 aa11.21□□□□□ -0.62
Trim9-203ENSMUST00000167755 Usp54Q8BL06 1588 aaKnown RBP11.21□□□□□ -0.62
Trim9-203ENSMUST00000167755 Abl1P00520 1123 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Q3UPC7 1272 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Jmjd4Q8BFT6 427 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Nol8Q3UHX0 1147 aaKnown RBP11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Hmox1P14901 289 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 CastP51125 788 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Ddx17Q501J6 650 aaKnown RBP11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Smarca5Q91ZW3 1051 aaKnown RBP11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Ccdc171E9Q1U1 1324 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Gli2Q0VGT2 1544 aa11.2□□□□□ -0.62
Trim9-203ENSMUST00000167755 Cwc27Q3TKY6 469 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Stk3Q9JI10 497 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 ArsiQ32KI9 573 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Rlbp1Q9Z275 317 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Dnmt1P13864 1620 aaKnown RBP11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Prrc2bQ7TPM1 1486 aaKnown RBP11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Phactr2B1AVP0 632 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Tfip11Q9ERA6 838 aaKnown RBP11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Sbno1Q689Z5 1390 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Tmc1Q8R4P5 757 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Gtf2a1Q99PM3 378 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Ppip5k1A2ARP1 1436 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Atf7ipQ7TT18 1306 aa11.19□□□□□ -0.62
Trim9-203ENSMUST00000167755 Zmym3Q9JLM4 1370 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Pnmal2G3X9N3 661 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Ankrd13dQ6PD24 605 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Ccer1Q9CQL2 403 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Erich6bQ9D4S6 220 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Txnrd1Q9JMH6 613 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Setd1bQ8CFT2 1985 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 VeztQ3ZK22 780 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Ccp110Q7TSH4 1004 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Nol12Q8BG17 217 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Nlrp3Q8R4B8 1033 aa11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Nsfl1cQ9CZ44 370 aaKnown RBP11.18□□□□□ -0.62
Trim9-203ENSMUST00000167755 Gnai2P08752 355 aaKnown RBP11.17□□□□□ -0.62
Trim9-203ENSMUST00000167755 Trim34bJ3QNR8 485 aa11.17□□□□□ -0.62
Trim9-203ENSMUST00000167755 EappQ5BU09 281 aa11.17□□□□□ -0.62
Trim9-203ENSMUST00000167755 Tulp4Q9JIL5 1547 aa11.17□□□□□ -0.62
Trim9-203ENSMUST00000167755 Smarce1O54941 411 aaKnown RBP11.17□□□□□ -0.62
Trim9-203ENSMUST00000167755 Kdm2bQ6P1G2 1309 aa11.17□□□□□ -0.62
Trim9-203ENSMUST00000167755 AU019823E9PUQ3 292 aa11.16□□□□□ -0.62
Trim9-203ENSMUST00000167755 Emilin2Q8K482 1074 aa11.16□□□□□ -0.62
Trim9-203ENSMUST00000167755 Tex14Q7M6U3 1450 aa11.16□□□□□ -0.62
Trim9-203ENSMUST00000167755 Lrrc7Q80TE7 1490 aa11.16□□□□□ -0.62
Trim9-203ENSMUST00000167755 Erc2Q6PH08 957 aa11.16□□□□□ -0.62
Trim9-203ENSMUST00000167755 Mical1Q8VDP3 1048 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms