RNA–Protein interactions for RNA: ENSMUST00000114779.8

Ssbp1-202, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-202ENSMUST00000114779 Mst1rQ62190 1378 aa9.71□□□□□ -0.85
Ssbp1-202ENSMUST00000114779 Uhrf1bp1lA2RSJ4 1457 aa9.71□□□□□ -0.85
Ssbp1-202ENSMUST00000114779 Tnrc6cQ3UHC0 1690 aaKnown RBP9.71□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Nsd3Q6P2L6 1439 aa9.71□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Q8BT18 775 aa9.7□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Zcrb1Q9CZ96 217 aaKnown RBP9.7□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 CenpbP27790 599 aa9.69□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Taok2Q6ZQ29 1240 aa9.69□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Cacna1sQ02789 1880 aa9.69□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 4930523C07RikE9Q2T4 99 aa9.68□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 CrklP47941 303 aa9.68□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Ddb1Q3U1J4 1140 aaKnown RBP9.68□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Ankrd23Q812A3 306 aa9.68□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Rgs17Q9QZB0 210 aa9.68□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Exoc5Q3TPX4 708 aa9.67□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 OptnQ8K3K8 584 aa9.67□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Vsig10D3YX43 558 aa9.67□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 RgmbQ7TQ33 436 aa9.66□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Cc2d1aQ8K1A6 943 aa9.66□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Ltbp1Q8CG19 1712 aa9.66□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Birc3O08863 600 aa9.66□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Apba2P98084 750 aa9.66□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Mdc1Q5PSV9 1707 aa9.66□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Elp1Q7TT37 1333 aaKnown RBP9.65□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Slit1Q80TR4 1531 aa9.65□□□□□ -0.86
Ssbp1-202ENSMUST00000114779 Zranb3Q6NZP1 1069 aa9.65□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 FancaQ9JL70 1439 aa9.65□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 PnisrA2AJT4 805 aaKnown RBP9.64□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Prdm10Q3UTQ7 1184 aa9.64□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Robo1O89026 1612 aa9.64□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Nckap5lQ6GQX2 1323 aa9.64□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Sik1Q60670 779 aa9.64□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Hoxc9P09633 260 aa9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Pank3Q8R2W9 370 aa9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Dcaf11Q91VU6 549 aa9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Kat6bQ8BRB7 1872 aa9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 4930572O03RikQ8C5Y0 211 aa9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Kcnh4A2A5F7 1018 aa9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Eif5bQ05D44 1216 aaKnown RBP9.63□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 PrxO55103 1391 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Nwd2Q6P5U7 1742 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Ubap1lG3UW59 384 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Plekhg5Q66T02 1073 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Kdm6aO70546 1401 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Adamtsl1Q8BLI0 1745 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Fer1l6E0CZ42 1862 aa9.62□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 GalcP54818 684 aa9.61□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Gm10471E9Q1C7 252 aa9.61□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Smg6P61406 1418 aaKnown RBP9.61□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Ly75Q60767 1723 aa9.61□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Vars2Q3U2A8 1060 aa9.61□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Scn7aB1AYL1 1681 aa9.61□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Zscan10Q3URR7 782 aa9.6□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Tmem132eQ6IEE6 982 aa9.6□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Rab11fip3Q8CHD8 1047 aa9.6□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Ppfibp2O35711 882 aa9.6□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Gprasp1Q5U4C1 1347 aa9.6□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Ubr1O70481 1757 aa9.59□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Afg3l2Q8JZQ2 802 aaKnown RBP9.59□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Rab3gap2Q8BMG7 1366 aa9.59□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Inpp5dQ9ES52 1191 aa9.59□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Anp32bQ9EST5 272 aaKnown RBP9.59□□□□□ -0.87
Ssbp1-202ENSMUST00000114779 Gsdma3Q5Y4Y6 464 aa9.59□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Simc1E9Q6E9 1354 aa9.58□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Sin3aQ60520 1274 aaKnown RBP9.57□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Ccne1Q61457 408 aa9.57□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Chd4Q6PDQ2 1915 aaKnown RBP9.57□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Ppp1r15aP17564 657 aa9.57□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Gm21680A0A0G2JGR8 267 aa9.57□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Arhgap33Q80YF9 1305 aa9.57□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Eif3bQ8JZQ9 803 aaKnown RBP9.56□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Lrit1Q8K099 624 aa9.56□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Pim2Q62070 370 aa9.56□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Col15a1O35206 1367 aa9.56□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Speer4bQ9D9F7 267 aa9.55□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Rps6ka4Q9Z2B9 773 aa9.55□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Map2P20357 1828 aa9.55□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 ThemisQ8BGW0 636 aa9.54□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Ankrd13dQ6PD24 605 aa9.54□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Ciz1Q8VEH2 845 aa9.54□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Cald1E9QA15 768 aaKnown RBP9.54□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Gpr150Q8BL07 427 aa9.54□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 GakQ99KY4 1305 aa9.53□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Mast2Q60592 1734 aa9.53□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Fam50bQ9WTJ8 334 aa9.53□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Snapc4Q8BP86 1333 aa9.53□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 Ptpn23Q6PB44 1692 aa9.52□□□□□ -0.88
Ssbp1-202ENSMUST00000114779 FocadA2AKG8 1798 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Akap11E9Q777 1895 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 HypkQ9CR41 129 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Trim28Q62318 834 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Nlrp6Q91WS2 869 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Iqcf3Q9D498 203 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Sos2Q02384 1333 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Adgrb1Q3UHD1 1582 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Klc3Q91W40 508 aa9.52□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Egfem1Q8C088 590 aa9.51□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 ApobrQ8VBT6 942 aa9.51□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Pknox2Q8BG99 474 aa9.51□□□□□ -0.89
Ssbp1-202ENSMUST00000114779 Eif4a2P10630 407 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms