RNA–Protein interactions for RNA: ENSMUST00000114779.8

Ssbp1-202, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-202ENSMUST00000114779 Gm35339A0A140LHH9 1649 aa15.97■□□□□ 0.15
Ssbp1-202ENSMUST00000114779 NischQ80TM9 1593 aa15.77■□□□□ 0.12
Ssbp1-202ENSMUST00000114779 Abcc9P70170 1546 aa15.24■□□□□ 0.03
Ssbp1-202ENSMUST00000114779 Abcc8B2RUS7 1588 aa15.24■□□□□ 0.03
Ssbp1-202ENSMUST00000114779 ScribQ80U72 1612 aa14.61□□□□□ -0.07
Ssbp1-202ENSMUST00000114779 NacadQ5SWP3 1504 aa14.35□□□□□ -0.11
Ssbp1-202ENSMUST00000114779 Kdm5dQ62240 1548 aa14.21□□□□□ -0.14
Ssbp1-202ENSMUST00000114779 Dcaf1Q80TR8 1506 aa14.12□□□□□ -0.15
Ssbp1-202ENSMUST00000114779 Sycp2Q9CUU3 1500 aa14.01□□□□□ -0.17
Ssbp1-202ENSMUST00000114779 Rb1cc1Q9ESK9 1588 aa13.74□□□□□ -0.21
Ssbp1-202ENSMUST00000114779 BicraF8VPZ9 1578 aa13.71□□□□□ -0.21
Ssbp1-202ENSMUST00000114779 Rhox8Q6VSS7 320 aa13.67□□□□□ -0.22
Ssbp1-202ENSMUST00000114779 Crybg2B7ZCC2 1516 aa13.62□□□□□ -0.23
Ssbp1-202ENSMUST00000114779 Ccdc180J3QNE4 1664 aa13.61□□□□□ -0.23
Ssbp1-202ENSMUST00000114779 Pds5bQ4VA53 1446 aaKnown RBP13.58□□□□□ -0.24
Ssbp1-202ENSMUST00000114779 Baz1aO88379 1555 aa13.57□□□□□ -0.24
Ssbp1-202ENSMUST00000114779 Zcchc6Q5BLK4 1491 aaKnown RBP13.39□□□□□ -0.27
Ssbp1-202ENSMUST00000114779 Atad2bE9Q166 1460 aaKnown RBP13.39□□□□□ -0.27
Ssbp1-202ENSMUST00000114779 Dnajc5bQ9CQ94 199 aa13.34□□□□□ -0.27
Ssbp1-202ENSMUST00000114779 Thoc2B1AZI6 1594 aaKnown RBP13.32□□□□□ -0.28
Ssbp1-202ENSMUST00000114779 Ercc6F8VPZ5 1481 aa13.3□□□□□ -0.28
Ssbp1-202ENSMUST00000114779 Smarca4Q3TKT4 1613 aaKnown RBP13.21□□□□□ -0.3
Ssbp1-202ENSMUST00000114779 Smarca2Q6DIC0 1577 aa13.19□□□□□ -0.3
Ssbp1-202ENSMUST00000114779 Baz1bQ9Z277 1479 aa13.15□□□□□ -0.3
Ssbp1-202ENSMUST00000114779 Iqgap2Q3UQ44 1575 aa13.11□□□□□ -0.31
Ssbp1-202ENSMUST00000114779 Cc2d2aQ8CFW7 1633 aa13.11□□□□□ -0.31
Ssbp1-202ENSMUST00000114779 Fam135aQ6NS59 1506 aa13.07□□□□□ -0.32
Ssbp1-202ENSMUST00000114779 Phldb1Q6PDH0 1371 aaKnown RBP13.04□□□□□ -0.32
Ssbp1-202ENSMUST00000114779 Cecr2E9Q2Z1 1453 aa13.03□□□□□ -0.32
Ssbp1-202ENSMUST00000114779 Wdr62Q3U3T8 1523 aa13.01□□□□□ -0.33
Ssbp1-202ENSMUST00000114779 Frmpd1A2AKB4 1549 aa12.97□□□□□ -0.33
Ssbp1-202ENSMUST00000114779 Ubl4bQ9CQ84 188 aa12.91□□□□□ -0.34
Ssbp1-202ENSMUST00000114779 Rtl1Q7M732 1744 aa12.9□□□□□ -0.34
Ssbp1-202ENSMUST00000114779 Brd4Q9ESU6 1400 aaKnown RBP12.9□□□□□ -0.34
Ssbp1-202ENSMUST00000114779 Cttnbp2B9EJA2 1648 aa12.83□□□□□ -0.36
Ssbp1-202ENSMUST00000114779 CftrP26361 1476 aa12.82□□□□□ -0.36
Ssbp1-202ENSMUST00000114779 Mrc2Q64449 1479 aa12.8□□□□□ -0.36
Ssbp1-202ENSMUST00000114779 Synj1Q8CHC4 1574 aa12.73□□□□□ -0.37
Ssbp1-202ENSMUST00000114779 Esf1Q3V1V3 845 aaKnown RBP12.73□□□□□ -0.37
Ssbp1-202ENSMUST00000114779 Trim41Q5NCC3 630 aa12.71□□□□□ -0.37
Ssbp1-202ENSMUST00000114779 Ccdc136Q3TVA9 1136 aa12.71□□□□□ -0.38
Ssbp1-202ENSMUST00000114779 Unc13aQ4KUS2 1712 aa12.66□□□□□ -0.38
Ssbp1-202ENSMUST00000114779 Rsf1E9PWW9 1441 aaKnown RBP12.66□□□□□ -0.38
Ssbp1-202ENSMUST00000114779 Kif15Q6P9L6 1387 aa12.58□□□□□ -0.4
Ssbp1-202ENSMUST00000114779 Cux2P70298 1426 aa12.56□□□□□ -0.4
Ssbp1-202ENSMUST00000114779 Npm1Q61937 292 aaKnown RBP12.53□□□□□ -0.4
Ssbp1-202ENSMUST00000114779 Cep164Q5DU05 1446 aa12.48□□□□□ -0.41
Ssbp1-202ENSMUST00000114779 Lamc3Q9R0B6 1581 aa12.48□□□□□ -0.41
Ssbp1-202ENSMUST00000114779 Lrriq1Q0P5X1 1673 aa12.42□□□□□ -0.42
Ssbp1-202ENSMUST00000114779 Ccdc18Q640L5 1455 aa12.41□□□□□ -0.42
Ssbp1-202ENSMUST00000114779 Kif21aQ9QXL2 1672 aa12.37□□□□□ -0.43
Ssbp1-202ENSMUST00000114779 Golga3P55937 1487 aa12.36□□□□□ -0.43
Ssbp1-202ENSMUST00000114779 Dnajc5P60904 198 aa12.34□□□□□ -0.43
Ssbp1-202ENSMUST00000114779 Cngb1E1AZ71 1325 aa12.33□□□□□ -0.44
Ssbp1-202ENSMUST00000114779 Eif4g3Q80XI3 1579 aaKnown RBP12.31□□□□□ -0.44
Ssbp1-202ENSMUST00000114779 Dhx29Q6PGC1 1365 aaKnown RBP12.3□□□□□ -0.44
Ssbp1-202ENSMUST00000114779 LrpprcQ6PB66 1392 aaKnown RBP12.29□□□□□ -0.44
Ssbp1-202ENSMUST00000114779 Il27Q8K3I6 234 aa12.29□□□□□ -0.44
Ssbp1-202ENSMUST00000114779 TnnQ80Z71 1560 aa12.28□□□□□ -0.44
Ssbp1-202ENSMUST00000114779 Urb2E9Q7L1 1524 aaKnown RBP12.26□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Fmn1Q05860 1466 aa12.26□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Top2bQ64511 1612 aa12.25□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Shroom2A2ALU4 1481 aa12.24□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Camsap1A2AHC3 1581 aa12.22□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Ift140E9PY46 1464 aa12.22□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Crocc2F6XLV1 1638 aa12.22□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 Plb1Q3TTY0 1478 aa12.22□□□□□ -0.45
Ssbp1-202ENSMUST00000114779 PogzQ8BZH4 1409 aaKnown RBP12.19□□□□□ -0.46
Ssbp1-202ENSMUST00000114779 Pabpn1Q8CCS6 302 aaKnown RBP12.17□□□□□ -0.46
Ssbp1-202ENSMUST00000114779 Rusc2Q80U22 1514 aa12.11□□□□□ -0.47
Ssbp1-202ENSMUST00000114779 Duox2A2AQ99 1517 aa12.11□□□□□ -0.47
Ssbp1-202ENSMUST00000114779 Efcab5A0JP43 1406 aa12.08□□□□□ -0.48
Ssbp1-202ENSMUST00000114779 Grin2bQ01097 1482 aa12.08□□□□□ -0.48
Ssbp1-202ENSMUST00000114779 Cc2d2bA0A286YDU8 1405 aa12.08□□□□□ -0.48
Ssbp1-202ENSMUST00000114779 Pbrm1Q8BSQ9 1634 aaKnown RBP12.06□□□□□ -0.48
Ssbp1-202ENSMUST00000114779 Pelp1Q9DBD5 1123 aaKnown RBP12.05□□□□□ -0.48
Ssbp1-202ENSMUST00000114779 Col17a1Q07563 1470 aa12.01□□□□□ -0.49
Ssbp1-202ENSMUST00000114779 Disp1Q3TDN0 1521 aa12.01□□□□□ -0.49
Ssbp1-202ENSMUST00000114779 Nup160Q9Z0W3 1402 aaKnown RBP11.99□□□□□ -0.49
Ssbp1-202ENSMUST00000114779 Zcchc11B2RX14 1644 aaKnown RBP11.99□□□□□ -0.49
Ssbp1-202ENSMUST00000114779 NrkQ9R0G8 1455 aa11.98□□□□□ -0.49
Ssbp1-202ENSMUST00000114779 Fgd6Q69ZL1 1399 aa11.94□□□□□ -0.5
Ssbp1-202ENSMUST00000114779 AqrQ8CFQ3 1481 aaKnown RBP11.93□□□□□ -0.5
Ssbp1-202ENSMUST00000114779 Top2aQ01320 1528 aaKnown RBP11.93□□□□□ -0.5
Ssbp1-202ENSMUST00000114779 Samd9lQ69Z37 1561 aa11.93□□□□□ -0.5
Ssbp1-202ENSMUST00000114779 Zeb1Q64318 1117 aa11.91□□□□□ -0.5
Ssbp1-202ENSMUST00000114779 Grin2aP35436 1464 aa11.9□□□□□ -0.5
Ssbp1-202ENSMUST00000114779 Shroom4Q1W617 1475 aa11.89□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 Rad54l2Q99NG0 1466 aa11.88□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 Ccdc88bQ4QRL3 1481 aa11.87□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 PtprkP35822 1457 aa11.85□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 Magi3Q9EQJ9 1476 aa11.84□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 SynmQ70IV5 1561 aa11.84□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 CadpsQ80TJ1 1355 aa11.84□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 Gpatch8A2A6A1 1505 aa11.83□□□□□ -0.51
Ssbp1-202ENSMUST00000114779 Npm2Q80W85 207 aa11.83□□□□□ -0.52
Ssbp1-202ENSMUST00000114779 Ttbk1Q6PCN3 1308 aa11.83□□□□□ -0.52
Ssbp1-202ENSMUST00000114779 Adgrl3Q80TS3 1537 aa11.82□□□□□ -0.52
Ssbp1-202ENSMUST00000114779 AknaQ80VW7 1404 aa11.81□□□□□ -0.52
Ssbp1-202ENSMUST00000114779 Gapvd1Q6PAR5 1458 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 102.1 ms