RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Erich6bQ9D4S6 220 aa10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Prrc2bQ7TPM1 1486 aaKnown RBP10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 LifrP42703 1092 aa10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Ddrgk1Q80WW9 315 aa10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Adgrl3Q80TS3 1537 aa10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Sos1Q62245 1319 aa10.16□□□□□ -0.78
Bdnf-208ENSMUST00000111049 MccE9PWI3 1003 aa10.15□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Stk11ipQ3TAA7 1072 aa10.15□□□□□ -0.78
Bdnf-208ENSMUST00000111049 Antxr1Q9CZ52 562 aa10.15□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Depdc5P61460 1591 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Q3TQI7 289 aaKnown RBP10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Nsd3Q6P2L6 1439 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Ppip5k2Q6ZQB6 1129 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Q9D2X8 372 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Prex1Q69ZK0 1650 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Trim27Q62158 513 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Cc2d1aQ8K1A6 943 aa10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Rrp9Q91WM3 475 aaKnown RBP10.14□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Cdk5rap2Q8K389 1822 aa10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Abca8aQ8K442 1620 aa10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Irx6Q9ER75 438 aa10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 MpripP97434 1024 aa10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Mcm10Q0VBD2 885 aa10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Zkscan1Q8BGS3 561 aaKnown RBP10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 PtprtQ99M80 1454 aa10.13□□□□□ -0.79
Bdnf-208ENSMUST00000111049 DnmbpQ6TXD4 1580 aa10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 MaddQ80U28 1577 aa10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Paxip1Q6NZQ4 1056 aa10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Cyp46a1Q9WVK8 500 aa10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Pik3r4Q8VD65 1358 aa10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Anapc15-psA0A140T8L6 141 aa10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Myom1Q62234 1667 aaKnown RBP10.12□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Fndc1E9Q043 1732 aa10.11□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Cfap65Q3V0B4 1847 aa10.11□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Q4VA45 678 aa10.11□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Trim28Q62318 834 aa10.11□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Cavin2Q63918 418 aaKnown RBP10.11□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Nsfl1cQ9CZ44 370 aaKnown RBP10.11□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Il4rP16382 810 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Sv2bQ8BG39 683 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Atp10aO54827 1508 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Ehbp1l1Q99MS7 1716 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Safb2Q80YR5 991 aaKnown RBP10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Klhdc4Q921I2 584 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Atp6v1dP57746 247 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Aldh8a1Q8BH00 487 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 FanclQ9CR14 375 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Abca9Q8K449 1623 aa10.1□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Map3k19E9Q3S4 1311 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Rsph6aQ8CDR2 708 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Smarca5Q91ZW3 1051 aaKnown RBP10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 CenppQ9CZ92 286 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Prkar2bP31324 416 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Filip1lQ6P6L0 1131 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Idi2Q8BFZ6 227 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Kdm4cQ8VCD7 1054 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Tecpr2Q3UH45 1423 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Arhgap23Q69ZH9 1483 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Sox12Q04890 314 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Ggnbp2Q5SV77 696 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Bag4Q8CI61 457 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Kif2cQ922S8 721 aa10.09□□□□□ -0.79
Bdnf-208ENSMUST00000111049 Erc2Q6PH08 957 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Casc1Q6TDU8 730 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Fam13aQ8BGI4 693 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Uhrf1bp1B2KF50 1429 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Zkscan2G3X952 960 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 TmpoQ61033 693 aaKnown RBP10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Cabp4Q8VHC5 271 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Tmem131lQ3U3D7 1597 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Smarce1O54941 411 aaKnown RBP10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Tnnt1O88346 262 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 St18Q80TY4 1045 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Ncapd2Q8K2Z4 1392 aa10.08□□□□□ -0.8
Bdnf-208ENSMUST00000111049 VgfQ0VGU4 617 aa10.07□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Med14A2ABV5 1459 aaKnown RBP10.07□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Topbp1Q6ZQF0 1515 aa10.07□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Phactr2B1AVP0 632 aa10.07□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Glipr1l2Q9CQ35 332 aa10.07□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Ush1cQ9ES64 910 aa10.07□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Knl1Q66JQ7 1612 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Nrxn1Q9CS84 1514 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Hoxb7P09024 217 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Gm156Q58A37 223 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Aldh1l2Q8K009 923 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Gnai2P08752 355 aaKnown RBP10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Hmox1P14901 289 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Pdia3P27773 505 aaKnown RBP10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Nucb1Q02819 459 aaKnown RBP10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Nphp1Q9QY53 687 aa10.06□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Naip7Q9JIB3 1402 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Chmp4cQ9D7F7 232 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Rasa1E9PYG6 1038 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Becn1O88597 448 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Bloc1s4Q8VED2 215 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Gripap1Q8VD04 806 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Mroh1E0CZ22 1640 aa10.05□□□□□ -0.8
Bdnf-208ENSMUST00000111049 PogkQ80TC5 607 aa10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 HnrnpmQ9D0E1 729 aaKnown RBP10.04□□□□□ -0.8
Bdnf-208ENSMUST00000111049 Asxl2Q8BZ32 1370 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms