RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Hoxb7P09024 217 aa16.51■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Smg7Q5RJH6 1138 aaKnown RBP16.51■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Aldh1l1Q8R0Y6 902 aa16.51■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Q8C5K5 320 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Pprc1Q6NZN1 1644 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 AampJ3QN89 436 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Nol11Q8BJW5 723 aaKnown RBP16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Prim1P20664 417 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Cwc27Q3TKY6 469 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Fndc1E9Q043 1732 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Eya1P97767 591 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 4930572O03RikQ8C5Y0 211 aa16.5■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Col17a1Q07563 1470 aa16.49■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Ddx17Q501J6 650 aaKnown RBP16.49■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Nckap5lQ6GQX2 1323 aa16.49■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Gnai2P08752 355 aaKnown RBP16.49■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Ppp2r3aB2RXC8 1150 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Rfx1P48377 963 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Nlgn1Q99K10 843 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Chmp4cQ9D7F7 232 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Hmox1P14901 289 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Cog6Q8R3I3 657 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 MvpQ9EQK5 861 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Cdc42bpbQ7TT50 1713 aa16.48■□□□□ 0.23
Clcn3-204ENSMUST00000110301 AnkarA2RT91 1465 aa16.47■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Smc4Q8CG47 1286 aa16.47■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Chpf2Q3UU43 768 aa16.47■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Pde3bQ61409 1100 aa16.47■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Podxl2Q8CAE9 603 aa16.47■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Plekhd1B2RPU2 505 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Snap23O09044 210 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Erbb3Q61526 1339 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Abca6Q8K441 1624 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Stk11ipQ3TAA7 1072 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Sos1Q62245 1319 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Kif21bQ9QXL1 1668 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Hecw1Q8K4P8 1604 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Cetn4Q8K4K1 168 aa16.46■□□□□ 0.23
Clcn3-204ENSMUST00000110301 Taok2Q6ZQ29 1240 aa16.45■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Srgap3Q812A2 1099 aa16.45■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Cyp46a1Q9WVK8 500 aa16.45■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Kif18aQ91WD7 886 aa16.45■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Dip2cE9PWR4 1557 aa16.45■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Scaf11E9PZM7 1456 aaKnown RBP16.44■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Gimap5Q8BWF2 308 aa16.44■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Nphp1Q9QY53 687 aa16.44■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Prkar2bP31324 416 aa16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Eif3bQ8JZQ9 803 aaKnown RBP16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 ZgpatQ8VDM1 511 aa16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Stk3Q9JI10 497 aa16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Slc35g1Q8BY79 368 aa16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 ApobrQ8VBT6 942 aa16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Kiaa1210E9Q0C6 1637 aa16.43■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Smc5Q8CG46 1101 aaKnown RBP16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Smarca5Q91ZW3 1051 aaKnown RBP16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Astn2Q80Z10 1352 aa16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Kidins220E9Q9B7 1793 aa16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Fam83gQ5SWY7 812 aa16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Tex14Q7M6U3 1450 aa16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Neurl4Q5NCX5 1563 aa16.42■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Hoxc9P09633 260 aa16.41■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Slc5a1Q8C3K6 665 aa16.41■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Iffo2Q8R2V2 512 aa16.41■□□□□ 0.22
Clcn3-204ENSMUST00000110301 ShprhQ7TPQ3 1674 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Vamp4O70480 141 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 PtmaP26350 111 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 CarsQ9ER72 831 aaKnown RBP16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Duxf3A0A0N4SV92 674 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Znf326O88291 580 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Gtf3c3Q3TMP1 882 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Rapgef3Q8VCC8 918 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 P2rx7Q9Z1M0 595 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Kiaa1107Q80TK0 1369 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 PaskQ8CEE6 1383 aa16.4■□□□□ 0.22
Clcn3-204ENSMUST00000110301 Phactr2B1AVP0 632 aa16.39■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Adamts13Q769J6 1426 aa16.39■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Knl1Q66JQ7 1612 aa16.38■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Robo2Q7TPD3 1470 aa16.38■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Rabep1O35551 862 aa16.37■□□□□ 0.21
Clcn3-204ENSMUST00000110301 OptnQ8K3K8 584 aa16.36■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Txnrd1Q9JMH6 613 aa16.36■□□□□ 0.21
Clcn3-204ENSMUST00000110301 NexnQ7TPW1 607 aa16.36■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Tnpo1Q8BFY9 898 aaKnown RBP16.36■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Ankrd50F7BE84 1390 aa16.36■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Zcchc11B2RX14 1644 aaKnown RBP16.36■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Gprasp1Q5U4C1 1347 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Ppp1r3fQ9JIG4 799 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Ankrd44B2RXR6 993 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Flad1Q8R123 492 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Stard3nlQ9DCI3 235 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Ercc6l2Q9JIM3 1537 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Trim28Q62318 834 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Ppp1r42Q8R1Z4 357 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Gnl3lQ6PGG6 577 aaKnown RBP16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Chrna2Q91X60 512 aa16.35■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Ttc19Q8CC21 365 aa16.34■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Zkscan2G3X952 960 aa16.34■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Myom2Q14BI5 1463 aa16.34■□□□□ 0.21
Clcn3-204ENSMUST00000110301 Rims1Q99NE5 1463 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Gcc1Q9D4H2 778 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms