RNA–Protein interactions for RNA: ENSMUST00000109113.7

Clk4-203, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 1 (best) BASIC

Gene Clk4, Length 1,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-203ENSMUST00000109113 Arhgap35Q91YM2 1499 aa7.89□□□□□ -1.15
Clk4-203ENSMUST00000109113 Hoxb3P09026 433 aa7.89□□□□□ -1.15
Clk4-203ENSMUST00000109113 Fchsd2Q3USJ8 740 aa7.89□□□□□ -1.15
Clk4-203ENSMUST00000109113 Hhipl2Q9D2G9 717 aa7.89□□□□□ -1.15
Clk4-203ENSMUST00000109113 Lrch3Q8BVU0 778 aa7.89□□□□□ -1.15
Clk4-203ENSMUST00000109113 Kif7B7ZNG0 1348 aa7.88□□□□□ -1.15
Clk4-203ENSMUST00000109113 Leng1Q9DB98 261 aa7.88□□□□□ -1.15
Clk4-203ENSMUST00000109113 Fam208aQ69ZR9 1610 aaKnown RBP7.87□□□□□ -1.15
Clk4-203ENSMUST00000109113 Ncoa1P70365 1447 aa7.87□□□□□ -1.15
Clk4-203ENSMUST00000109113 Ptch1Q61115 1434 aa7.87□□□□□ -1.15
Clk4-203ENSMUST00000109113 LmlnQ8BMN4 681 aa7.87□□□□□ -1.15
Clk4-203ENSMUST00000109113 Gm17324Q8C6J8 137 aa7.87□□□□□ -1.15
Clk4-203ENSMUST00000109113 Erich3F6QRE9 1637 aa7.86□□□□□ -1.15
Clk4-203ENSMUST00000109113 A0A1L1SQF0 893 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Mfsd10Q9D2V8 456 aaKnown RBP7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Phlpp1Q8CHE4 1687 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Gli3Q61602 1583 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Dennd4bQ3U1Y4 1499 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Slurp2P0DP59 97 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Zfp943Q6NZP4 507 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Pip4k2bQ80XI4 416 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Tpcn1Q9EQJ0 817 aa7.85□□□□□ -1.15
Clk4-203ENSMUST00000109113 Cfap65Q3V0B4 1847 aa7.84□□□□□ -1.15
Clk4-203ENSMUST00000109113 InhbbQ04999 411 aa7.84□□□□□ -1.15
Clk4-203ENSMUST00000109113 Foxj1Q61660 421 aa7.84□□□□□ -1.15
Clk4-203ENSMUST00000109113 Clip1Q922J3 1391 aa7.84□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kidins220E9Q9B7 1793 aa7.83□□□□□ -1.16
Clk4-203ENSMUST00000109113 Hspa1lP16627 641 aa7.83□□□□□ -1.16
Clk4-203ENSMUST00000109113 Onecut2Q6XBJ3 505 aa7.83□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kat6aQ8BZ21 2003 aa7.83□□□□□ -1.16
Clk4-203ENSMUST00000109113 Trpm1Q2TV84 1622 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 NefmP08553 848 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Rc3h1Q4VGL6 1130 aaKnown RBP7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Agbl2Q8CDK2 862 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Anks4bQ8K3X6 423 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kri1Q8VDQ9 704 aaKnown RBP7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 PlvapQ91VC4 438 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Ly6iQ9WU67 134 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Bcl9Q9D219 1425 aa7.82□□□□□ -1.16
Clk4-203ENSMUST00000109113 Apba2P98084 750 aa7.81□□□□□ -1.16
Clk4-203ENSMUST00000109113 Lemd3Q9WU40 921 aa7.81□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kif27Q7M6Z4 1394 aa7.81□□□□□ -1.16
Clk4-203ENSMUST00000109113 Hecw1Q8K4P8 1604 aa7.81□□□□□ -1.16
Clk4-203ENSMUST00000109113 Wnt7bP28047 349 aa7.81□□□□□ -1.16
Clk4-203ENSMUST00000109113 Mmp16Q9WTR0 607 aa7.81□□□□□ -1.16
Clk4-203ENSMUST00000109113 Arhgap5P97393 1501 aa7.8□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kcnma1Q08460 1209 aa7.8□□□□□ -1.16
Clk4-203ENSMUST00000109113 Prom2Q3UUY6 835 aa7.8□□□□□ -1.16
Clk4-203ENSMUST00000109113 Hic1Q9R1Y5 733 aa7.8□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kcnj4P52189 445 aa7.79□□□□□ -1.16
Clk4-203ENSMUST00000109113 Rimbp3Q3V0F0 1606 aa7.79□□□□□ -1.16
Clk4-203ENSMUST00000109113 Dhx57Q6P5D3 1388 aaKnown RBP7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 VegfbP49766 207 aa7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 Trim47Q8C0E3 641 aa7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 Cdc42bpgQ80UW5 1551 aa7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 Trpm2Q91YD4 1506 aa7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 Cdc42bpaQ3UU96 1719 aa7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 CenpbP27790 599 aa7.78□□□□□ -1.16
Clk4-203ENSMUST00000109113 Kiaa1551Q5DTW7 1521 aa7.77□□□□□ -1.17
Clk4-203ENSMUST00000109113 Arhgap23Q69ZH9 1483 aa7.77□□□□□ -1.17
Clk4-203ENSMUST00000109113 Cfap74Q3UY96 1578 aa7.77□□□□□ -1.17
Clk4-203ENSMUST00000109113 Defa-rs1P17533 116 aa7.77□□□□□ -1.17
Clk4-203ENSMUST00000109113 RictorQ6QI06 1708 aa7.77□□□□□ -1.17
Clk4-203ENSMUST00000109113 Rims2Q9EQZ7 1530 aa7.76□□□□□ -1.17
Clk4-203ENSMUST00000109113 VaspP70460 375 aaKnown RBP7.76□□□□□ -1.17
Clk4-203ENSMUST00000109113 Znf687Q9D2D7 1237 aa7.76□□□□□ -1.17
Clk4-203ENSMUST00000109113 Zc3h13E9Q784 1729 aaKnown RBP7.76□□□□□ -1.17
Clk4-203ENSMUST00000109113 AlkP97793 1621 aa7.76□□□□□ -1.17
Clk4-203ENSMUST00000109113 Knl1Q66JQ7 1612 aa7.76□□□□□ -1.17
Clk4-203ENSMUST00000109113 Ncoa3O09000 1398 aa7.75□□□□□ -1.17
Clk4-203ENSMUST00000109113 PzpQ61838 1495 aa7.75□□□□□ -1.17
Clk4-203ENSMUST00000109113 Capn5O08688 640 aaKnown RBP7.74□□□□□ -1.17
Clk4-203ENSMUST00000109113 Kirrel2Q7TSU7 700 aa7.74□□□□□ -1.17
Clk4-203ENSMUST00000109113 CltcQ68FD5 1675 aaKnown RBP7.74□□□□□ -1.17
Clk4-203ENSMUST00000109113 Mug1P28665 1476 aa7.74□□□□□ -1.17
Clk4-203ENSMUST00000109113 Gm32742A0A1B0GT42 1604 aa7.74□□□□□ -1.17
Clk4-203ENSMUST00000109113 Pdcd11Q6NS46 1862 aaKnown RBP7.74□□□□□ -1.17
Clk4-203ENSMUST00000109113 Abcc3B2RX12 1523 aa7.73□□□□□ -1.17
Clk4-203ENSMUST00000109113 Peg3Q3URU2 1571 aa7.73□□□□□ -1.17
Clk4-203ENSMUST00000109113 DnmbpQ6TXD4 1580 aa7.73□□□□□ -1.17
Clk4-203ENSMUST00000109113 Kdm3bQ6ZPY7 1562 aa7.73□□□□□ -1.17
Clk4-203ENSMUST00000109113 Aplp2Q06335 707 aa7.73□□□□□ -1.17
Clk4-203ENSMUST00000109113 Nop53Q8BK35 484 aaKnown RBP7.73□□□□□ -1.17
Clk4-203ENSMUST00000109113 FechP22315 420 aaKnown RBP7.72□□□□□ -1.17
Clk4-203ENSMUST00000109113 KhsrpQ3U0V1 748 aaKnown RBP7.72□□□□□ -1.17
Clk4-203ENSMUST00000109113 Aebp1Q640N1 1128 aa7.72□□□□□ -1.17
Clk4-203ENSMUST00000109113 A0A286YCP9 139 aa7.71□□□□□ -1.17
Clk4-203ENSMUST00000109113 Afap1Q80YS6 731 aa7.71□□□□□ -1.17
Clk4-203ENSMUST00000109113 Fhod3Q76LL6 1578 aa7.71□□□□□ -1.18
Clk4-203ENSMUST00000109113 Lmo7E9PYF4 1699 aaKnown RBP7.71□□□□□ -1.18
Clk4-203ENSMUST00000109113 Pnma5Q5DTT8 618 aa7.7□□□□□ -1.18
Clk4-203ENSMUST00000109113 Tll2Q9WVM6 1012 aa7.7□□□□□ -1.18
Clk4-203ENSMUST00000109113 Gm18596A0A1W2P860 280 aa7.7□□□□□ -1.18
Clk4-203ENSMUST00000109113 Catsper2A2ARP9 588 aa7.7□□□□□ -1.18
Clk4-203ENSMUST00000109113 Slit2Q9R1B9 1521 aa7.69□□□□□ -1.18
Clk4-203ENSMUST00000109113 Gm8765B7ZWJ3 1017 aa7.69□□□□□ -1.18
Clk4-203ENSMUST00000109113 Spryd3E9Q9B3 442 aa7.69□□□□□ -1.18
Clk4-203ENSMUST00000109113 Gm906Q3V0M1 1017 aa7.69□□□□□ -1.18
Clk4-203ENSMUST00000109113 Trappc8E9PWG2 1437 aa7.69□□□□□ -1.18
Clk4-203ENSMUST00000109113 Scaf11E9PZM7 1456 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 9.4 ms