RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 MpripP97434 1024 aa25.25■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Slit2Q9R1B9 1521 aa25.24■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Eya1P97767 591 aa25.23■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Ccdc30Q8BVF4 654 aa25.22■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Bcl11bQ99PV8 884 aa25.22■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Eif5bQ05D44 1216 aaKnown RBP25.21■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Dusp27Q148W8 1138 aa25.21■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Neurod2Q62414 383 aa25.21■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Gm21698A0A087WQP8 267 aa25.21■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Gm21671G3UY31 267 aa25.21■■□□□ 1.63
Ttc39a-203ENSMUST00000106619 Marf1Q8BJ34 1730 aaKnown RBP25.19■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Mcm10Q0VBD2 885 aa25.19■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 TnikP83510 1323 aa25.19■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Kdm6aO70546 1401 aa25.19■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Card10P58660 1021 aa25.18■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Stk31Q99MW1 1018 aa25.18■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Iqcf3Q9D498 203 aa25.18■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Kank1E9Q238 1360 aa25.18■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Nol11Q8BJW5 723 aaKnown RBP25.18■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 ZgpatQ8VDM1 511 aa25.16■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Swt1Q9DBQ9 907 aa25.16■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 L3mbtl2P59178 703 aa25.16■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Hspa1lP16627 641 aa25.15■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Ttc41Q692V3 1318 aa25.15■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Amotl2Q8K371 772 aa25.14■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Atxn3Q9CVD2 355 aa25.14■■□□□ 1.62
Ttc39a-203ENSMUST00000106619 Cabp2Q9JLK4 216 aa25.13■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Tom1O88746 492 aa25.13■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 HdgfP51859 237 aaKnown RBP25.13■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Plin1Q8CGN5 517 aa25.12■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Rab11fip3Q8CHD8 1047 aa25.12■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Zfp142G5E869 1843 aa25.12■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Upf2A2AT37 1269 aaKnown RBP25.11■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Ybx3Q9JKB3 361 aaKnown RBP25.1■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Cdhr2E9Q7P9 1308 aa25.1■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Erbb3Q61526 1339 aa25.1■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Plekhh1Q80TI1 1356 aa25.1■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Ecm2Q5FW85 670 aa25.09■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Trpm3Q5F4S9 1721 aa25.09■■□□□ 1.61
Ttc39a-203ENSMUST00000106619 Gsdma3Q5Y4Y6 464 aa25.08■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 TmpoQ61033 693 aaKnown RBP25.07■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 HypkQ9CR41 129 aa25.07■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 OptnQ8K3K8 584 aa25.06■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 TkfcQ8VC30 578 aa25.06■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Acsbg1Q99PU5 721 aa25.06■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Txnrd1Q9JMH6 613 aa25.06■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 CrklP47941 303 aa25.05■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Znf526Q8BI66 675 aa25.05■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Col15a1O35206 1367 aa25.04■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Simc1E9Q6E9 1354 aa25.04■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Smim5Q8BT42 78 aa25.03■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Slx1bQ8BX32 270 aa25.03■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Slit1Q80TR4 1531 aa25.03■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Arfgef2A2A5R2 1792 aa25.02■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Ttc21aQ8C0S4 1314 aa25.02■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Qtrt2B8ZXI1 415 aa25.02■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Gas2l2Q5SSG4 860 aa25.02■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 Ppp1r37Q8BKR5 712 aa25.02■■□□□ 1.6
Ttc39a-203ENSMUST00000106619 FocadA2AKG8 1798 aa25.01■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Ahnak2E9PYB0 1738 aaKnown RBP25.01■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Ankrd50F7BE84 1390 aa25.01■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Amotl1Q9D4H4 968 aa24.99■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Ksr2Q3UVC0 959 aa24.98■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Bcl2l12Q9D3J3 255 aa24.98■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Larp1bA0A0A6YXJ7 370 aaKnown RBP24.98■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 RgmbQ7TQ33 436 aa24.98■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Gm10471E9Q1C7 252 aa24.96■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Arhgef1Q61210 920 aaKnown RBP24.96■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Lrrc59Q922Q8 307 aaKnown RBP24.96■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Pard3Q99NH2 1333 aa24.96■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Gnai1B2RSH2 354 aa24.95■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Ccar1Q8CH18 1146 aaKnown RBP24.95■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Gnai3Q9DC51 354 aa24.95■■□□□ 1.59
Ttc39a-203ENSMUST00000106619 Nup153E9Q3G8 1462 aaKnown RBP24.95■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Rtf1A2AQ19 715 aaKnown RBP24.94■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Plekhd1B2RPU2 505 aa24.94■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Rbm25B2RY56 838 aaKnown RBP24.94■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 NudcO35685 332 aaKnown RBP24.93■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Cdc37l1Q9CZP7 335 aa24.93■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Aplp2Q06335 707 aa24.92■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Rtl5Q5DTT4 599 aa24.92■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Zranb3Q6NZP1 1069 aa24.91■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Ddx54Q8K4L0 874 aaKnown RBP24.91■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Slc5a4bQ91ZP4 660 aa24.91■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 CastP51125 788 aa24.9■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Rwdd1Q9CQK7 243 aa24.9■■□□□ 1.58
Ttc39a-203ENSMUST00000106619 Sos1Q62245 1319 aa24.88■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 ThemisQ8BGW0 636 aa24.88■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Snap23O09044 210 aa24.87■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Aox2Q5SGK3 1345 aa24.86■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Pak3Q61036 559 aa24.85■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Abcc12Q80WJ6 1366 aa24.85■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Tnks1bp1P58871 1720 aa24.85■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Zpr1Q62384 459 aa24.85■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Calr4Q3TQS0 420 aa24.84■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Adgrb1Q3UHD1 1582 aa24.84■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Ccdc171E9Q1U1 1324 aa24.83■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Tns2Q8CGB6 1400 aa24.83■■□□□ 1.57
Ttc39a-203ENSMUST00000106619 Myo5bP21271 1818 aa24.83■■□□□ 1.56
Ttc39a-203ENSMUST00000106619 Usp16Q99LG0 825 aa24.82■■□□□ 1.56
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms