RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Rnf187Q8BFX1 236 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Necab1Q8BG18 352 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Sv2bQ8BG39 683 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Tmx3Q8BXZ1 456 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Dhx9O70133 1380 aaKnown RBP12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Gm10093D3YYI8 482 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Hdac1O09106 482 aaKnown RBP12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 MyclP10166 368 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Exoc8Q6PGF7 716 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 HmmrQ00547 794 aaKnown RBP12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Ccdc181Q80ZU5 509 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Gnl2Q99LH1 728 aaKnown RBP12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Chd1lQ9CXF7 900 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Tbc1d9Q3UYK3 1264 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Jakmip3Q5DTN8 844 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Irx4Q9QY61 515 aa12.09□□□□□ -0.47
Lig4-201ENSMUST00000095476 Gnai2P08752 355 aaKnown RBP12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 AppP12023 770 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Dydc1Q9D9T0 175 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 CebpzP53569 1052 aaKnown RBP12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Hspa4Q61316 841 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Tmx4Q8C0L0 335 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Krt82Q99M74 516 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Naip2Q9QUK4 1447 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Lemd3Q9WU40 921 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Kdm4aQ8BW72 1064 aa12.08□□□□□ -0.48
Lig4-201ENSMUST00000095476 Mindy4Q3UQI9 744 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Chrna2Q91X60 512 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Snw1Q9CSN1 536 aaKnown RBP12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ube2hP62257 183 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Map4k4P97820 1233 aaKnown RBP12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Rassf4Q8CB96 322 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ccar2Q8VDP4 922 aaKnown RBP12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Cc2d2bA0A286YDU8 1405 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ttll5Q8CHB8 1328 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Map3k1P53349 1493 aa12.07□□□□□ -0.48
Lig4-201ENSMUST00000095476 Eif5P59325 429 aaKnown RBP12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ccdc178Q8CDV0 866 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 NinlQ6ZQ12 1394 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Q8C5K5 320 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ktn1Q61595 1327 aaKnown RBP12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Cfap157Q0VFX2 523 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Iqca1Q9CUL5 857 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Soga1E1U8D0 1418 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 Tdrd9Q14BI7 1383 aa12.06□□□□□ -0.48
Lig4-201ENSMUST00000095476 CenphQ9QYM8 241 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 Tbc1d8Q9Z1A9 1134 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 FanciQ8K368 1330 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 EprsQ8CGC7 1512 aaKnown RBP12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 KdrP35918 1367 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 Gm1043A0A140LJC2 1431 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 Rad54l2Q99NG0 1466 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 Nsd2Q8BVE8 1365 aa12.05□□□□□ -0.48
Lig4-201ENSMUST00000095476 Wdr63B2RY71 923 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Aldh1l1Q8R0Y6 902 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Duxf3A0A0N4SV92 674 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Strn4P58404 760 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Abcf1Q6P542 837 aaKnown RBP12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Bloc1s4Q8VED2 215 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 DonsonQ9QXP4 560 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Zmym4A2A791 1549 aaKnown RBP12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Duox2A2AQ99 1517 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Cfap73J3QPZ5 306 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Nap1l1P28656 391 aaKnown RBP12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Usp25P57080 1055 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ncoa2Q61026 1462 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ccdc73Q8CDM4 1066 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Vps18Q8R307 973 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Top1mtQ8R4U6 593 aa12.04□□□□□ -0.48
Lig4-201ENSMUST00000095476 Ptpdc1Q6NZK8 747 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Pof1bQ8K4L4 587 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Igbp1bQ9QZ29 343 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 U2af2P26369 475 aaKnown RBP12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 ErbinQ80TH2 1402 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Smc2Q8CG48 1191 aaKnown RBP12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Zbtb22Q9Z0G7 638 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Cfdp1O88271 295 aaKnown RBP12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Sh3bp1P55194 680 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Zfp397Q7TNK4 527 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 PdiltQ9DAN1 588 aa12.03□□□□□ -0.48
Lig4-201ENSMUST00000095476 Mink1Q9JM52 1308 aa12.02□□□□□ -0.48
Lig4-201ENSMUST00000095476 Kdm2bQ6P1G2 1309 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 Hap1O35668 628 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 Mcm6P97311 821 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 Asxl1P59598 1514 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gjb2Q00977 226 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 Zeb2Q9R0G7 1215 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 WrnO09053 1401 aa12.02□□□□□ -0.49
Lig4-201ENSMUST00000095476 Me1P06801 572 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Neurod6P48986 337 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Pank2Q3U4S0 443 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Stx6Q9JKK1 255 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 PogzQ8BZH4 1409 aaKnown RBP12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gm18336A0A140LIU8 765 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Fam107bQ3TGF2 131 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Puf60Q3UEB3 564 aaKnown RBP12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Gbp4Q61107 620 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Anp32cQ64G17 123 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 TnikP83510 1323 aa12.01□□□□□ -0.49
Lig4-201ENSMUST00000095476 Sycp1Q62209 993 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms