RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Pes1Q9EQ61 584 aaKnown RBP12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Cdc42bpbQ7TT50 1713 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Smg7Q5RJH6 1138 aaKnown RBP12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 IbspQ61711 324 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ric3Q8BPM6 367 aa12.19□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ccdc171E9Q1U1 1324 aa12.18□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Robo2Q7TPD3 1470 aa12.18□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Tarbp1E9Q368 1579 aa12.18□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Pde3bQ61409 1100 aa12.18□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Nphp4P59240 1425 aa12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Pik3r4Q8VD65 1358 aa12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Cdk13Q69ZA1 1511 aaKnown RBP12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ppp1r15aP17564 657 aa12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Rrp12Q6P5B0 1295 aaKnown RBP12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Rrp9Q91WM3 475 aaKnown RBP12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 AnkarA2RT91 1465 aa12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Abca6Q8K441 1624 aa12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 CltcQ68FD5 1675 aaKnown RBP12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Eif3bQ8JZQ9 803 aaKnown RBP12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Elp1Q7TT37 1333 aaKnown RBP12.17□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 PalmQ9Z0P4 383 aa12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ercc6l2Q9JIM3 1537 aa12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 SkilQ60665 675 aa12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Tspyl2Q7TQI8 677 aa12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Tns3Q5SSZ5 1440 aa12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 SlkO54988 1233 aa12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Ddx17Q501J6 650 aaKnown RBP12.16□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 ApobrQ8VBT6 942 aa12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Sh3bp5Q9Z131 463 aa12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Hoxb7P09024 217 aa12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Cetn4Q8K4K1 168 aa12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Map4k4P97820 1233 aaKnown RBP12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Cabp2Q9JLK4 216 aa12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Wdr17E9Q271 1322 aa12.15□□□□□ -0.46
Cpsf1-201ENSMUST00000071898 Tmem132eQ6IEE6 982 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Dnajc10Q9DC23 793 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Map3k19E9Q3S4 1311 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Kif24Q6NWW5 1356 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Brpf1B2RRD7 1212 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Pcmtd1P59913 357 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Exoc5Q3TPX4 708 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Ahdc1Q6PAL7 1594 aaKnown RBP12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Slc4a10Q5DTL9 1118 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Rassf8Q8CJ96 419 aa12.14□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Tnpo1Q8BFY9 898 aaKnown RBP12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Gtf2a1Q99PM3 378 aa12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Atxn3Q9CVD2 355 aa12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Smarce1O54941 411 aaKnown RBP12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 MecomP14404 1042 aa12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Atp6v1dP57746 247 aa12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Fchsd2Q3USJ8 740 aa12.13□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Casq1O09165 405 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Vgll3P85442 326 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 TmpoQ61033 693 aaKnown RBP12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Plekhg1F6S200 1446 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Fbxo2Q80UW2 297 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Txnrd1Q9JMH6 613 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Astn2Q80Z10 1352 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Egfem1Q8C088 590 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Smc5Q8CG46 1101 aaKnown RBP12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Bcl2l13P59017 434 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Nek4Q9Z1J2 792 aa12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Lamc1P02468 1607 aaKnown RBP12.12□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Hspa1lP16627 641 aa12.11□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 TefQ9JLC6 301 aa12.11□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 TnikP83510 1323 aa12.11□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Cnnm1Q0GA42 951 aa12.1□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Slc12a5Q91V14 1138 aa12.1□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Q9D2X8 372 aa12.1□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 4930407I10RikD3Z5T8 1512 aa12.09□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Arhgef1Q61210 920 aaKnown RBP12.09□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 ShprhQ7TPQ3 1674 aa12.09□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Iffo2Q8R2V2 512 aa12.09□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Gprasp1Q5U4C1 1347 aa12.09□□□□□ -0.47
Cpsf1-201ENSMUST00000071898 Scaf11E9PZM7 1456 aaKnown RBP12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Dot1lQ6XZL8 1540 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 CgnP59242 1191 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Filip1lQ6P6L0 1131 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Gnl3lQ6PGG6 577 aaKnown RBP12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Sv2bQ8BG39 683 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Slc5a1Q8C3K6 665 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Amotl2Q8K371 772 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Chmp3Q9CQ10 224 aa12.08□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Klc3Q91W40 508 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Cdc37l1Q9CZP7 335 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 DmtnQ9WV69 405 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 St18Q80TY4 1045 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Cog6Q8R3I3 657 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Kif18aQ91WD7 886 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 AcrbpQ3V140 540 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Brinp3Q499E0 766 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Lrrc59Q922Q8 307 aaKnown RBP12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Prex1Q69ZK0 1650 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Maco1Q7TQE6 664 aaKnown RBP12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 OptnQ8K3K8 584 aa12.07□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 PsapQ61207 557 aaKnown RBP12.06□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Rbm10Q99KG3 930 aaKnown RBP12.06□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Tulp4Q9JIL5 1547 aa12.06□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Fkbp4P30416 458 aa12.06□□□□□ -0.48
Cpsf1-201ENSMUST00000071898 Hmgb2P30681 210 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms