RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Zc3h13E9Q784 1729 aaKnown RBP21.63■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Gnai1B2RSH2 354 aa21.62■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Gnai3Q9DC51 354 aa21.62■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Aplp1Q03157 653 aa21.62■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Chmp4bQ9D8B3 224 aaKnown RBP21.62■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Ankrd44B2RXR6 993 aa21.61■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Cetn4Q8K4K1 168 aa21.61■■□□□ 1.05
Ddx28-201ENSMUST00000058579 4933402E13RikQ9D4D2 429 aa21.61■■□□□ 1.05
Ddx28-201ENSMUST00000058579 PplQ9R269 1755 aa21.61■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Gm10093D3YYI8 482 aa21.6■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Hdac1O09106 482 aaKnown RBP21.6■■□□□ 1.05
Ddx28-201ENSMUST00000058579 LifrP42703 1092 aa21.59■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Safb2Q80YR5 991 aaKnown RBP21.59■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Wdr63B2RY71 923 aa21.58■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Ssh1Q76I79 1042 aa21.58■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Asxl2Q8BZ32 1370 aa21.58■■□□□ 1.05
Ddx28-201ENSMUST00000058579 Mcm4P49717 862 aa21.58■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Txndc2Q6P902 515 aa21.58■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Senp3Q9EP97 568 aaKnown RBP21.58■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Uhrf1bp1lA2RSJ4 1457 aa21.57■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Dnttip2Q8R2M2 758 aaKnown RBP21.57■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Psme1P97371 249 aa21.56■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Nwd1A6H603 1563 aa21.56■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Usp16Q99LG0 825 aa21.55■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Nsfl1cQ9CZ44 370 aaKnown RBP21.55■■□□□ 1.04
Ddx28-201ENSMUST00000058579 CarsQ9ER72 831 aaKnown RBP21.54■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Spef2Q8C9J3 1734 aa21.54■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Rfx1P48377 963 aa21.54■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Znf316Q6PGE4 1016 aa21.54■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Cabp2Q9JLK4 216 aa21.54■■□□□ 1.04
Ddx28-201ENSMUST00000058579 AU015836B2RUM3 263 aa21.53■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Mcm10Q0VBD2 885 aa21.53■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Tbc1d9Q3UYK3 1264 aa21.53■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Rsph6aQ8CDR2 708 aa21.53■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Cavin2Q63918 418 aaKnown RBP21.52■■□□□ 1.04
Ddx28-201ENSMUST00000058579 Trim27Q62158 513 aa21.52■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Chd2E9PZM4 1827 aaKnown RBP21.52■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Ncapd2Q8K2Z4 1392 aa21.51■■□□□ 1.03
Ddx28-201ENSMUST00000058579 U2surpQ6NV83 1029 aaKnown RBP21.51■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Tfip11Q9ERA6 838 aaKnown RBP21.51■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Nek4Q9Z1J2 792 aa21.51■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Plcb2A3KGF7 1181 aa21.5■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Rsph3aQ3UFY4 516 aa21.5■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Idi2Q8BFZ6 227 aa21.5■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Dip2aQ8BWT5 1523 aa21.5■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Sos1Q62245 1319 aa21.5■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Ddit3P35639 168 aa21.49■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Fgd1P52734 960 aa21.49■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Kif1aP33173 1695 aa21.49■■□□□ 1.03
Ddx28-201ENSMUST00000058579 MarsQ68FL6 902 aaKnown RBP21.49■■□□□ 1.03
Ddx28-201ENSMUST00000058579 GorabQ8BRM2 368 aa21.49■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Phf14Q9D4H9 881 aa21.49■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Cgnl1Q6AW69 1298 aa21.48■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Ric3Q8BPM6 367 aa21.48■■□□□ 1.03
Ddx28-201ENSMUST00000058579 HnrnpuQ8VEK3 800 aaKnown RBP21.46■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Klhdc4Q921I2 584 aa21.46■■□□□ 1.03
Ddx28-201ENSMUST00000058579 IghaA0A0A6YXW6 389 aa21.46■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Kdm4cQ8VCD7 1054 aa21.46■■□□□ 1.03
Ddx28-201ENSMUST00000058579 Eif4g2Q62448 906 aaKnown RBP21.45■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Aldh8a1Q8BH00 487 aa21.45■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Plin1Q8CGN5 517 aa21.45■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Hoxb7P09024 217 aa21.44■■□□□ 1.02
Ddx28-201ENSMUST00000058579 PtpruB1AUH1 1446 aa21.44■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Gemin5Q8BX17 1502 aaKnown RBP21.44■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Pdcl3Q8BVF2 240 aa21.44■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Ccdc146E9Q9F7 977 aa21.43■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Chd4Q6PDQ2 1915 aaKnown RBP21.43■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Kif20aP97329 887 aa21.42■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Rab11fip3Q8CHD8 1047 aa21.42■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Aldh1l2Q8K009 923 aa21.42■■□□□ 1.02
Ddx28-201ENSMUST00000058579 CenppQ9CZ92 286 aa21.42■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Il4rP16382 810 aa21.41■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Stk31Q99MW1 1018 aa21.41■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Kif24Q6NWW5 1356 aa21.41■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Gcc1Q9D4H2 778 aa21.41■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Anapc15-psA0A140T8L6 141 aa21.4■■□□□ 1.02
Ddx28-201ENSMUST00000058579 CatipB9EKE5 520 aa21.4■■□□□ 1.02
Ddx28-201ENSMUST00000058579 FanclQ9CR14 375 aa21.4■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Triml2E9PW10 424 aa21.39■■□□□ 1.02
Ddx28-201ENSMUST00000058579 Eif4a2P10630 407 aa21.39■■□□□ 1.01
Ddx28-201ENSMUST00000058579 1700010I14RikQ7TPG0 532 aa21.39■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Kcnn1Q9EQR3 537 aa21.39■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Kif20bQ80WE4 1774 aaKnown RBP21.38■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Tm6sf1P58749 370 aa21.38■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Mcm2P97310 904 aa21.38■■□□□ 1.01
Ddx28-201ENSMUST00000058579 MpripP97434 1024 aa21.38■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Aifm3Q3TY86 605 aa21.38■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Isy1Q69ZQ2 285 aaKnown RBP21.37■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Pcdh10E9PXQ7 1057 aa21.36■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Chl1P70232 1209 aa21.36■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Fam13aQ8BGI4 693 aa21.36■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Dmrtc1Q9D9R7 182 aa21.36■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Slit3Q9WVB4 1523 aa21.36■■□□□ 1.01
Ddx28-201ENSMUST00000058579 1700019A02RikA0A087WPV9 146 aa21.35■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Ppip5k2Q6ZQB6 1129 aa21.35■■□□□ 1.01
Ddx28-201ENSMUST00000058579 EngaseQ8BX80 734 aa21.35■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Dip2bQ3UH60 1574 aa21.35■■□□□ 1.01
Ddx28-201ENSMUST00000058579 DekQ7TNV0 380 aaKnown RBP21.35■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Casq1O09165 405 aa21.34■■□□□ 1.01
Ddx28-201ENSMUST00000058579 Ppp6r3Q922D4 844 aa21.34■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms