RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Il4rP16382 810 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Nsfl1cQ9CZ44 370 aaKnown RBP11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Cep152A2AUM9 1736 aaKnown RBP11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Myo5cE9Q1F5 1742 aa11.94□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Wdr63B2RY71 923 aa11.93□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Fchsd2Q3USJ8 740 aa11.93□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ap3b2Q9JME5 1082 aa11.93□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Fndc1E9Q043 1732 aa11.93□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Sv2bQ8BG39 683 aa11.93□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ppip5k2Q6ZQB6 1129 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Cyp46a1Q9WVK8 500 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Itsn2Q9Z0R6 1659 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Abca9Q8K449 1623 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Brd1E9PZ26 1189 aaKnown RBP11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 CalcaP70160 136 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Dmrtc1Q9D9R7 182 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ppp1r15aP17564 657 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 IbspQ61711 324 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 FanclQ9CR14 375 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Prex1Q69ZK0 1650 aa11.92□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Map3k19E9Q3S4 1311 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 CgnP59242 1191 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Filip1lQ6P6L0 1131 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ddrgk1Q80WW9 315 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Hfm1D3Z4R1 1434 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Fam135bQ9DAI6 1403 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Uggt1Q6P5E4 1551 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Rab11fip3Q8CHD8 1047 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ankrd44B2RXR6 993 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 1700010I14RikQ7TPG0 532 aa11.91□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Ankrd50F7BE84 1390 aa11.9□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Adgrb3Q80ZF8 1522 aa11.9□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Vamp4O70480 141 aa11.9□□□□□ -0.5
Pcdh1-201ENSMUST00000057185 Prkar2bP31324 416 aa11.9□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Myom2Q14BI5 1463 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Babam1Q3UI43 333 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Bcl2l13P59017 434 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 VgfQ0VGU4 617 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Cpa2Q504N0 417 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Gtf2a1Q99PM3 378 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Stk3Q9JI10 497 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Trim27Q62158 513 aa11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Rbm10Q99KG3 930 aaKnown RBP11.89□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Aifm3Q3TY86 605 aa11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Q3UJC8 639 aa11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 TmpoQ61033 693 aaKnown RBP11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Zkscan1Q8BGS3 561 aaKnown RBP11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Abca17E9PX95 1733 aa11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Gpatch11Q3UFS4 262 aa11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Idi2Q8BFZ6 227 aa11.88□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Atp10aO54827 1508 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Clasp1Q80TV8 1535 aaKnown RBP11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Hs1bp3Q3TC93 395 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Wwc1Q5SXA9 1104 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 CatipB9EKE5 520 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Cwc27Q3TKY6 469 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 St18Q80TY4 1045 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Srgap3Q812A2 1099 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 PtmsQ9D0J8 101 aaKnown RBP11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Gcc1Q9D4H2 778 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Bcar3Q9QZK2 820 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Tubgcp6G5E8P0 1769 aa11.87□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Rasa1E9PYG6 1038 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Jakmip1Q8BVL9 626 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Rsph6aQ8CDR2 708 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Gm10093D3YYI8 482 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Hdac1O09106 482 aaKnown RBP11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Bag4Q8CI61 457 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 KdrP35918 1367 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Tshz3Q8CGV9 1081 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Ttc21aQ8C0S4 1314 aa11.86□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Ush1cQ9ES64 910 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Nsd3Q6P2L6 1439 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Knl1Q66JQ7 1612 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Dennd6aQ8BH65 605 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Gripap1Q8VD04 806 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Synj2Q9D2G5 1434 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Dip2cE9PWR4 1557 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Syce3B5KM66 88 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Erc2Q6PH08 957 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Bloc1s4Q8VED2 215 aa11.85□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 NpatQ8BMA5 1420 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Eif4a2P10630 407 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Fam13aQ8BGI4 693 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Znf521Q6KAS7 1311 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Becn1O88597 448 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 MecomP14404 1042 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Rrp9Q91WM3 475 aaKnown RBP11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Nphp1Q9QY53 687 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Plxnc1Q9QZC2 1574 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 PaskQ8CEE6 1383 aa11.84□□□□□ -0.51
Pcdh1-201ENSMUST00000057185 Zfp777B9EKF4 885 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Cfdp1O88271 295 aaKnown RBP11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Mcm2P97310 904 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Zkscan2G3X952 960 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Gnai2P08752 355 aaKnown RBP11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Ccne1Q61457 408 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Polr3gQ6NXY9 223 aa11.83□□□□□ -0.52
Pcdh1-201ENSMUST00000057185 Sytl4Q9R0Q1 673 aa11.83□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms