RNA–Protein interactions for RNA: ENSMUST00000026926.4

Sec61a2-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

TSL 5 BASIC

Gene Sec61a2, Length 756 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2-201ENSMUST00000026926 Plekhd1B2RPU2 505 aa29.24■■■□□ 2.27
Sec61a2-201ENSMUST00000026926 Ppfibp2O35711 882 aa29.24■■■□□ 2.27
Sec61a2-201ENSMUST00000026926 FancaQ9JL70 1439 aa29.24■■■□□ 2.27
Sec61a2-201ENSMUST00000026926 Zpr1Q62384 459 aa29.22■■■□□ 2.27
Sec61a2-201ENSMUST00000026926 Exoc5Q3TPX4 708 aa29.2■■■□□ 2.26
Sec61a2-201ENSMUST00000026926 Sik1Q60670 779 aa29.19■■■□□ 2.26
Sec61a2-201ENSMUST00000026926 Tmem132eQ6IEE6 982 aa29.19■■■□□ 2.26
Sec61a2-201ENSMUST00000026926 Slit1Q80TR4 1531 aa29.19■■■□□ 2.26
Sec61a2-201ENSMUST00000026926 Snapc4Q8BP86 1333 aa29.17■■■□□ 2.26
Sec61a2-201ENSMUST00000026926 Mdc1Q5PSV9 1707 aa29.17■■■□□ 2.26
Sec61a2-201ENSMUST00000026926 Ubr1O70481 1757 aa29.13■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Chd4Q6PDQ2 1915 aaKnown RBP29.13■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Erbb3Q61526 1339 aa29.12■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Prdm10Q3UTQ7 1184 aa29.11■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Rpgrip1Q9EPQ2 1331 aa29.1■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Nsd3Q6P2L6 1439 aa29.1■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Kcnh4A2A5F7 1018 aa29.09■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Fam184bQ0KK56 942 aa29.09■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Zranb3Q6NZP1 1069 aa29.09■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Gpr150Q8BL07 427 aa29.09■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 TkfcQ8VC30 578 aa29.09■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Ppargc1bQ8VHJ7 1014 aa29.09■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 PsdQ5DTT2 1024 aa29.08■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Pim2Q62070 370 aa29.08■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 Arhgap33Q80YF9 1305 aa29.08■■■□□ 2.25
Sec61a2-201ENSMUST00000026926 En2P09066 324 aa29.07■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Bsdc1Q80Y55 427 aa29.07■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Hoxc9P09633 260 aa29.06■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Scn7aB1AYL1 1681 aa29.05■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Slc4a1apE9PX68 744 aa29.05■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Afg3l2Q8JZQ2 802 aaKnown RBP29.05■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Cc2d1aQ8K1A6 943 aa29.04■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Magea1O89006 320 aa29.03■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Magea5O89009 320 aa29.03■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Magea2Q9R2A2 320 aa29.03■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Ccdc85cE9Q6B2 420 aa29.02■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Col15a1O35206 1367 aa29.01■■■□□ 2.24
Sec61a2-201ENSMUST00000026926 Map2P20357 1828 aa29■■■□□ 2.23
Sec61a2-201ENSMUST00000026926 Birc3O08863 600 aa29■■■□□ 2.23
Sec61a2-201ENSMUST00000026926 FocadA2AKG8 1798 aa29■■■□□ 2.23
Sec61a2-201ENSMUST00000026926 Pnpla7A2AJ88 1352 aa28.99■■■□□ 2.23
Sec61a2-201ENSMUST00000026926 Slc24a1Q91WD8 1130 aa28.98■■■□□ 2.23
Sec61a2-201ENSMUST00000026926 Elp1Q7TT37 1333 aaKnown RBP28.97■■■□□ 2.23
Sec61a2-201ENSMUST00000026926 Hoxb7P09024 217 aa28.95■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Rad17Q6NXW6 688 aa28.94■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Cwc22Q8C5N3 908 aaKnown RBP28.94■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Gm10471E9Q1C7 252 aa28.93■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Kcna3P16390 528 aa28.92■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Ccne1Q61457 408 aa28.92■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Q8BT18 775 aa28.92■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Ciz1Q8VEH2 845 aa28.92■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Ankrd13dQ6PD24 605 aa28.9■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Fam50bQ9WTJ8 334 aa28.89■■■□□ 2.22
Sec61a2-201ENSMUST00000026926 Sos2Q02384 1333 aa28.89■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Kif23E9Q5G3 953 aa28.88■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 IbtkQ6ZPR6 1352 aaKnown RBP28.88■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Ptpn23Q6PB44 1692 aa28.86■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Gm21680A0A0G2JGR8 267 aa28.86■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Hmgb2P30681 210 aaKnown RBP28.86■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Adgrb1Q3UHD1 1582 aa28.85■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Akt1s1Q9D1F4 257 aa28.84■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Kcnq2Q9Z351 759 aa28.84■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Smg6P61406 1418 aaKnown RBP28.84■■■□□ 2.21
Sec61a2-201ENSMUST00000026926 Rps6ka4Q9Z2B9 773 aa28.82■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Trpc5Q9QX29 975 aa28.81■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Arfgef2A2A5R2 1792 aa28.8■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Ubxn2bQ0KL01 331 aa28.79■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Speer4bQ9D9F7 267 aa28.79■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Simc1E9Q6E9 1354 aa28.78■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Ahnak2E9PYB0 1738 aaKnown RBP28.78■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Tmf1B9EKI3 1091 aa28.77■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Aplp2Q06335 707 aa28.77■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 4930572O03RikQ8C5Y0 211 aa28.77■■■□□ 2.2
Sec61a2-201ENSMUST00000026926 Fam198bQ3UPI1 517 aa28.76■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 Kiaa0319lQ8K135 1048 aa28.76■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 ThemisQ8BGW0 636 aa28.75■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 AtrnQ9WU60 1428 aa28.75■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 Pank3Q8R2W9 370 aa28.74■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 Dcaf11Q91VU6 549 aa28.74■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 PrxO55103 1391 aa28.74■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 Kdm6aO70546 1401 aa28.73■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 Ppp1r37Q8BKR5 712 aa28.73■■■□□ 2.19
Sec61a2-201ENSMUST00000026926 Sin3aQ60520 1274 aaKnown RBP28.7■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 Klc3Q91W40 508 aa28.67■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 Inpp5dQ9ES52 1191 aa28.67■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 IncenpQ9WU62 880 aa28.67■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 ApobrQ8VBT6 942 aa28.66■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 Eya1P97767 591 aa28.65■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 Fchsd2Q3USJ8 740 aa28.65■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 Larp1Q6ZQ58 1072 aaKnown RBP28.64■■■□□ 2.18
Sec61a2-201ENSMUST00000026926 Emilin1Q99K41 1017 aa28.61■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Abca3Q8R420 1704 aa28.6■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Eif4a2P10630 407 aa28.6■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Gprasp1Q5U4C1 1347 aa28.59■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Igsf1Q7TQA1 1317 aa28.59■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 PnisrA2AJT4 805 aaKnown RBP28.58■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Ccnl1Q52KE7 532 aaKnown RBP28.58■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 ErfeQ6PGN1 340 aa28.58■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Egfem1Q8C088 590 aa28.58■■■□□ 2.17
Sec61a2-201ENSMUST00000026926 Parp14Q2EMV9 1817 aa28.57■■■□□ 2.16
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms