RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Ccdc60Q8C4J0 545 aa23.18■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Gimap6Q8K349 305 aa23.18■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Ncoa4Q5U4H9 625 aa23.17■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Slit2Q9R1B9 1521 aa23.16■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Ubr1O70481 1757 aa23.15■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Duxf3A0A0N4SV92 674 aa23.14■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Vamp4O70480 141 aa23.14■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Tmem2Q5FWI3 1383 aa23.14■■□□□ 1.3
Chmp6-201ENSMUST00000026434 Cabp4Q8VHC5 271 aa23.14■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Sox12Q04890 314 aa23.13■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Egfem1Q8C088 590 aa23.13■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Ipo9Q91YE6 1041 aa23.13■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Trim26Q99PN3 545 aa23.13■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Cabp2Q9JLK4 216 aa23.13■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Col14a1Q80X19 1797 aa23.13■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Scn7aB1AYL1 1681 aa23.12■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Pak3Q61036 559 aa23.12■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Nrxn3Q6P9K9 1571 aa23.12■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Thsd7aQ69ZU6 1645 aa23.11■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Gm21190A0A0G2JGJ6 266 aa23.11■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Plekhm2Q80TQ5 1018 aa23.1■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Aldh1l1Q8R0Y6 902 aa23.1■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Ncapd2Q8K2Z4 1392 aa23.1■■□□□ 1.29
Chmp6-201ENSMUST00000026434 C3P01027 1663 aa23.09■■□□□ 1.29
Chmp6-201ENSMUST00000026434 TmpoQ61033 693 aaKnown RBP23.09■■□□□ 1.29
Chmp6-201ENSMUST00000026434 MlecQ6ZQI3 291 aaKnown RBP23.09■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Ptpn23Q6PB44 1692 aa23.08■■□□□ 1.29
Chmp6-201ENSMUST00000026434 MpripP97434 1024 aa23.08■■□□□ 1.29
Chmp6-201ENSMUST00000026434 Kcnh5Q920E3 988 aa23.07■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Usp16Q99LG0 825 aa23.07■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Map2P20357 1828 aa23.07■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Camta1A2A891 1682 aa23.06■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Tmc1Q8R4P5 757 aa23.06■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Gsdma3Q5Y4Y6 464 aa23.06■■□□□ 1.28
Chmp6-201ENSMUST00000026434 KarsQ99MN1 595 aaKnown RBP23.06■■□□□ 1.28
Chmp6-201ENSMUST00000026434 TimelessQ9R1X4 1197 aa23.06■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Mcm10Q0VBD2 885 aa23.05■■□□□ 1.28
Chmp6-201ENSMUST00000026434 FancaQ9JL70 1439 aa23.04■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Rtf1A2AQ19 715 aaKnown RBP23.04■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Hoxc9P09633 260 aa23.04■■□□□ 1.28
Chmp6-201ENSMUST00000026434 HypkQ9CR41 129 aa23.04■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Gm6268A2A3U9 297 aa23.03■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Eya1P97767 591 aa23.03■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Fyb1O35601 819 aa23.02■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Q3UPC7 1272 aa23.02■■□□□ 1.28
Chmp6-201ENSMUST00000026434 B4galnt3Q6L8S8 986 aa23.02■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Maco1Q7TQE6 664 aaKnown RBP23.02■■□□□ 1.28
Chmp6-201ENSMUST00000026434 Cyb5rlB1AS42 316 aa23.01■■□□□ 1.27
Chmp6-201ENSMUST00000026434 MarsQ68FL6 902 aaKnown RBP23.01■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Rlbp1Q9Z275 317 aa23.01■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Wdr17E9Q271 1322 aa23■■□□□ 1.27
Chmp6-201ENSMUST00000026434 MvpQ9EQK5 861 aa23■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Phlpp1Q8CHE4 1687 aa22.99■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Wwc1Q5SXA9 1104 aa22.99■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Trpm3Q5F4S9 1721 aa22.99■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Igsf1Q7TQA1 1317 aa22.99■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Kcna6Q61923 529 aa22.98■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Sipa1l2Q80TE4 1722 aa22.98■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Nsd3Q6P2L6 1439 aa22.98■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Ankrd44B2RXR6 993 aa22.97■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Tmco5bQ80X59 307 aa22.97■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Dbr1Q923B1 550 aa22.97■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Aldh1l2Q8K009 923 aa22.96■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Kdm6aO70546 1401 aa22.95■■□□□ 1.27
Chmp6-201ENSMUST00000026434 Fmnl2A2APV2 1086 aa22.95■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Chl1P70232 1209 aa22.95■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Ccne1Q61457 408 aa22.95■■□□□ 1.26
Chmp6-201ENSMUST00000026434 U2surpQ6NV83 1029 aaKnown RBP22.95■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Slain2Q8CI08 581 aa22.95■■□□□ 1.26
Chmp6-201ENSMUST00000026434 PtprvP70289 1705 aa22.95■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Ppp2r3aB2RXC8 1150 aa22.94■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Map7O88735 730 aa22.94■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Slc35g1Q8BY79 368 aa22.94■■□□□ 1.26
Chmp6-201ENSMUST00000026434 TatQ8QZR1 454 aa22.94■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Nckap5lQ6GQX2 1323 aa22.94■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Ppm1gQ61074 542 aa22.93■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Ipo8Q7TMY7 1010 aa22.93■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Parp14Q2EMV9 1817 aa22.92■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Amotl1Q9D4H4 968 aa22.92■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Ppp1r3fQ9JIG4 799 aa22.92■■□□□ 1.26
Chmp6-201ENSMUST00000026434 HnrnpuQ8VEK3 800 aaKnown RBP22.91■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Plin1Q8CGN5 517 aa22.9■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Nfat5Q9WV30 1534 aa22.9■■□□□ 1.26
Chmp6-201ENSMUST00000026434 SkilQ60665 675 aa22.89■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Ric3Q8BPM6 367 aa22.89■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Foxp4Q9DBY0 795 aaKnown RBP22.89■■□□□ 1.26
Chmp6-201ENSMUST00000026434 Adgrb1Q3UHD1 1582 aa22.89■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Farp2Q91VS8 1065 aa22.89■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Cetn4Q8K4K1 168 aa22.88■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Robo1O89026 1612 aa22.87■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Phlpp2Q8BXA7 1320 aa22.87■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Wnk3Q80XP9 1757 aa22.87■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Nectin2P32507 530 aa22.87■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Rapgef3Q8VCC8 918 aa22.87■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Znf330Q922H9 316 aa22.87■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Ccdc183A2AJB1 534 aa22.86■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Tet3Q8BG87 1668 aa22.86■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Abcc12Q80WJ6 1366 aa22.85■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Trim30dE9PWL0 497 aa22.84■■□□□ 1.25
Chmp6-201ENSMUST00000026434 Atf3Q60765 181 aa22.84■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 82 ms