RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Stk31Q99MW1 1018 aa13.93□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Ap3b2Q9JME5 1082 aa13.93□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Kif20bQ80WE4 1774 aaKnown RBP13.93□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Pnmal2G3X9N3 661 aa13.93□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Gnai1B2RSH2 354 aa13.92□□□□□ -0.18
Cfap54-201ENSMUST00000020200 D430041D05RikF6ZGR6 1678 aa13.92□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Gnai3Q9DC51 354 aa13.92□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Ccdc171E9Q1U1 1324 aa13.92□□□□□ -0.18
Cfap54-201ENSMUST00000020200 1700019A02RikA0A087WPV9 146 aa13.92□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Znf335A2A5K6 1337 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Snap23O09044 210 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Q3UPC7 1272 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Pik3c2aQ61194 1686 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Zmym3Q9JLM4 1370 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Parp14Q2EMV9 1817 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 AU019823E9PUQ3 292 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Pibf1E9Q6K3 756 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 FancaQ9JL70 1439 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Frmpd2A0A140LI67 1392 aa13.91□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Nsd3Q6P2L6 1439 aa13.9□□□□□ -0.18
Cfap54-201ENSMUST00000020200 C5P06684 1680 aa13.9□□□□□ -0.18
Cfap54-201ENSMUST00000020200 Ak7Q9D2H2 614 aa13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 CemipQ8BI06 1361 aa13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Camta1A2A891 1682 aa13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Als2Q920R0 1651 aa13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 TmpoQ61033 693 aaKnown RBP13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Ccne1Q61457 408 aa13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Map2P20357 1828 aa13.89□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Cdk12Q14AX6 1484 aaKnown RBP13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Eya1P97767 591 aa13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Ggnbp2Q5SV77 696 aa13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Tmem132eQ6IEE6 982 aa13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 KarsQ99MN1 595 aaKnown RBP13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Med1Q925J9 1575 aa13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Iqcf3Q9D498 203 aa13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Ubr1O70481 1757 aa13.88□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Aplp1Q03157 653 aa13.87□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.87□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Prim1P20664 417 aa13.87□□□□□ -0.19
Cfap54-201ENSMUST00000020200 CanxP35564 591 aaKnown RBP13.87□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Nkx1-2P42580 305 aa13.87□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Ccdc27Q3V036 639 aa13.86□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Aldh1l1Q8R0Y6 902 aa13.86□□□□□ -0.19
Cfap54-201ENSMUST00000020200 NalcnQ8BXR5 1738 aa13.86□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Ccdc183A2AJB1 534 aa13.86□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Bcl9Q9D219 1425 aa13.86□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Col16a1Q8BLX7 1580 aa13.85□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Mon2Q80TL7 1715 aa13.84□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Topaz1E5FYH1 1653 aa13.84□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Aifm3Q3TY86 605 aa13.84□□□□□ -0.19
Cfap54-201ENSMUST00000020200 C3P01027 1663 aa13.84□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Ppp2r3aB2RXC8 1150 aa13.84□□□□□ -0.19
Cfap54-201ENSMUST00000020200 AampJ3QN89 436 aa13.84□□□□□ -0.19
Cfap54-201ENSMUST00000020200 Hoxc9P09633 260 aa13.83□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Ipo8Q7TMY7 1010 aa13.83□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Eif2s2Q99L45 331 aaKnown RBP13.83□□□□□ -0.2
Cfap54-201ENSMUST00000020200 ArxO35085 564 aa13.83□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Ric3Q8BPM6 367 aa13.82□□□□□ -0.2
Cfap54-201ENSMUST00000020200 MvpQ9EQK5 861 aa13.82□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Sipa1l2Q80TE4 1722 aa13.81□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Ankrd44B2RXR6 993 aa13.81□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Hsp90ab1P11499 724 aaKnown RBP13.81□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Atl3Q91YH5 541 aa13.81□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Tns3Q5SSZ5 1440 aa13.8□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Mdc1Q5PSV9 1707 aa13.8□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Rtf1A2AQ19 715 aaKnown RBP13.8□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Sos1Q62245 1319 aa13.79□□□□□ -0.2
Cfap54-201ENSMUST00000020200 MarsQ68FL6 902 aaKnown RBP13.79□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Sart3Q9JLI8 962 aaKnown RBP13.79□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Dnai1Q8C0M8 701 aa13.79□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Fyb1O35601 819 aa13.78□□□□□ -0.2
Cfap54-201ENSMUST00000020200 PtprvP70289 1705 aa13.78□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Scn7aB1AYL1 1681 aa13.78□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Chl1P70232 1209 aa13.78□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Col14a1Q80X19 1797 aa13.77□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Tmem2Q5FWI3 1383 aa13.77□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Kif24Q6NWW5 1356 aa13.77□□□□□ -0.2
Cfap54-201ENSMUST00000020200 Lmtk3Q5XJV6 1424 aa13.77□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Evi5lH3BKQ3 813 aa13.76□□□□□ -0.21
Cfap54-201ENSMUST00000020200 SkilQ60665 675 aa13.76□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Amotl2Q8K371 772 aa13.76□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Irx6Q9ER75 438 aa13.76□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Slain2Q8CI08 581 aa13.76□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Kif18aQ91WD7 886 aa13.76□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Cavin2Q63918 418 aaKnown RBP13.75□□□□□ -0.21
Cfap54-201ENSMUST00000020200 TatQ8QZR1 454 aa13.75□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Rims2Q9EQZ7 1530 aa13.75□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Ppm1gQ61074 542 aa13.75□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Dnajc10Q9DC23 793 aa13.75□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Cog6Q8R3I3 657 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Tet3Q8BG87 1668 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Thsd7aQ69ZU6 1645 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Phlpp2Q8BXA7 1320 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Triml2E9PW10 424 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Tnnt1O88346 262 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Ddx17Q501J6 650 aaKnown RBP13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Ano8Q6PB70 1060 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 HypkQ9CR41 129 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Ncapd2Q8K2Z4 1392 aa13.74□□□□□ -0.21
Cfap54-201ENSMUST00000020200 Hs1bp3Q3TC93 395 aa13.73□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms