RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 CenppQ9CZ92 286 aa12.25□□□□□ -0.45
Nedd1-201ENSMUST00000020163 AdgbG3UZ78 1657 aa12.25□□□□□ -0.45
Nedd1-201ENSMUST00000020163 PaskQ8CEE6 1383 aa12.25□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Cdc42bpgQ80UW5 1551 aa12.25□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Cnga1P29974 684 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Prdm10Q3UTQ7 1184 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Znf330Q922H9 316 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Kiaa0556Q8C753 1610 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Plxnc1Q9QZC2 1574 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 G3bp1P97855 465 aaKnown RBP12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Chmp4bQ9D8B3 224 aaKnown RBP12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Kiaa0753Q6A000 959 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Tbc1d31Q6NXY1 996 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Map3k5O35099 1380 aa12.24□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Anp32cQ64G17 123 aa12.23□□□□□ -0.45
Nedd1-201ENSMUST00000020163 MvpQ9EQK5 861 aa12.23□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Gm45140A0A0N4SUM8 220 aa12.23□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Cgnl1Q6AW69 1298 aa12.23□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Aldh1l1Q8R0Y6 902 aa12.23□□□□□ -0.45
Nedd1-201ENSMUST00000020163 CarsQ9ER72 831 aaKnown RBP12.23□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Cavin4A2AMM0 362 aa12.22□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Nectin2P32507 530 aa12.22□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Glipr1l2Q9CQ35 332 aa12.22□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Skint5A7XUY5 1461 aa12.22□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Kif3aP28741 701 aa12.22□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Fndc1E9Q043 1732 aa12.22□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Zdhhc9P59268 364 aa12.21□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Ppip5k2Q6ZQB6 1129 aa12.21□□□□□ -0.45
Nedd1-201ENSMUST00000020163 NhsB1AV60 1647 aa12.21□□□□□ -0.45
Nedd1-201ENSMUST00000020163 Nrxn1Q9CS84 1514 aa12.21□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Aldh8a1Q8BH00 487 aa12.21□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Dnajc14Q921R4 703 aa12.21□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Grpel1Q99LP6 217 aa12.21□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ift172Q6VH22 1749 aa12.21□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Syce3B5KM66 88 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 E4f1Q8CCE9 783 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Usp32F8VPZ3 1604 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Elp1Q7TT37 1333 aaKnown RBP12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 AatkQ80YE4 1365 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ankrd44B2RXR6 993 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Puf60Q3UEB3 564 aaKnown RBP12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Q3UPC7 1272 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Cyp27a1Q9DBG1 533 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Kidins220E9Q9B7 1793 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Atp10dQ8K2X1 1416 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Gripap1Q8VD04 806 aa12.2□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Adgrb3Q80ZF8 1522 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Trim27Q62158 513 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Nutm1Q8BHP2 1126 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Inpp5bQ8K337 993 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ttc21bQ0HA38 1315 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Nsd3Q6P2L6 1439 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Atp7bQ64446 1462 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ppp6r3Q922D4 844 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 MsnP26041 577 aaKnown RBP12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Kif4P33174 1231 aa12.19□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Depdc5P61460 1591 aa12.18□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ccdc173A0JLY1 547 aa12.18□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Rbm27Q5SFM8 1060 aaKnown RBP12.18□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Plekhm2Q80TQ5 1018 aa12.18□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Nucb1Q02819 459 aaKnown RBP12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ncbp1Q3UYV9 790 aaKnown RBP12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 PalldQ9ET54 1408 aa12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Ccdc146E9Q9F7 977 aa12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Tbc1d30Q69ZT9 766 aa12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Gcc1Q9D4H2 778 aa12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Mcm2P97310 904 aa12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Abca6Q8K441 1624 aa12.17□□□□□ -0.46
Nedd1-201ENSMUST00000020163 NinlQ6ZQ12 1394 aa12.16□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Rnf123Q5XPI3 1314 aa12.16□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Vgll3P85442 326 aa12.16□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Stk24Q99KH8 431 aa12.16□□□□□ -0.46
Nedd1-201ENSMUST00000020163 AglF8VPN4 1532 aa12.15□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Pdia3P27773 505 aaKnown RBP12.15□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Bach2P97303 839 aa12.15□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Eif4g2Q62448 906 aaKnown RBP12.15□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Mrps27Q8BK72 415 aaKnown RBP12.15□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Fam13bQ8K2H3 851 aa12.15□□□□□ -0.46
Nedd1-201ENSMUST00000020163 Rnf214Q8BFU3 668 aaKnown RBP12.15□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Chd1lQ9CXF7 900 aa12.15□□□□□ -0.47
Nedd1-201ENSMUST00000020163 HnrnpuQ8VEK3 800 aaKnown RBP12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Vamp4O70480 141 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Tmco5bQ80X59 307 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Swt1Q9DBQ9 907 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Gdpd2Q9ESM6 539 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Gm45015A0A140LII9 184 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Gm18336A0A140LIU8 765 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Gadd45bP22339 160 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Ptgs1P22437 602 aa12.14□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Stag3O70576 1240 aa12.13□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Stk11ipQ3TAA7 1072 aa12.13□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Kank4Q6P9J5 1016 aa12.13□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Zfp251Q6PCX8 632 aa12.13□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Fam184aE9PW83 1143 aa12.13□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Rangap1P46061 589 aaKnown RBP12.13□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Hvcn1Q3U2S8 269 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Fchsd2Q3USJ8 740 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Irx4Q9QY61 515 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 TimelessQ9R1X4 1197 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 CenpjQ569L8 1344 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms