RNA–Protein interactions for RNA: ENSMUST00000018531.11

Shroom1-201, Transcript of Protein Shroom1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom1, Length 2,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1-201ENSMUST00000018531 Ccdc9Q8VC31 543 aaKnown RBP17.36■□□□□ 0.37
Shroom1-201ENSMUST00000018531 Prkrip1Q9CWV6 186 aaKnown RBP17.35■□□□□ 0.37
Shroom1-201ENSMUST00000018531 TnrQ8BYI9 1358 aa17.35■□□□□ 0.37
Shroom1-201ENSMUST00000018531 Qtrt2B8ZXI1 415 aa17.34■□□□□ 0.37
Shroom1-201ENSMUST00000018531 Fbxo41Q6NS60 873 aa17.34■□□□□ 0.37
Shroom1-201ENSMUST00000018531 Cabp4Q8VHC5 271 aa17.34■□□□□ 0.37
Shroom1-201ENSMUST00000018531 Ipo9Q91YE6 1041 aa17.34■□□□□ 0.37
Shroom1-201ENSMUST00000018531 Birc3O08863 600 aa17.33■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Fmnl2A2APV2 1086 aa17.33■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Zfp777B9EKF4 885 aa17.33■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Znf526Q8BI66 675 aa17.33■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Nlrp6Q91WS2 869 aa17.33■□□□□ 0.36
Shroom1-201ENSMUST00000018531 HdgfP51859 237 aaKnown RBP17.32■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Nckap5lQ6GQX2 1323 aa17.31■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Slit2Q9R1B9 1521 aa17.31■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Slc5a4bQ91ZP4 660 aa17.31■□□□□ 0.36
Shroom1-201ENSMUST00000018531 P2rx7Q9Z1M0 595 aa17.31■□□□□ 0.36
Shroom1-201ENSMUST00000018531 FocadA2AKG8 1798 aa17.3■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Card10P58660 1021 aa17.3■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Gtf3c3Q3TMP1 882 aa17.3■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Cdhr2E9Q7P9 1308 aa17.29■□□□□ 0.36
Shroom1-201ENSMUST00000018531 TatQ8QZR1 454 aa17.29■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Lrrc59Q922Q8 307 aaKnown RBP17.29■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Bcl2l12Q9D3J3 255 aa17.28■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Znf541Q0GGX2 1363 aa17.28■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Kiaa1107Q80TK0 1369 aa17.28■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Uhrf1bp1lA2RSJ4 1457 aa17.28■□□□□ 0.36
Shroom1-201ENSMUST00000018531 GsdmaQ9EST1 446 aa17.28■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Parp14Q2EMV9 1817 aa17.28■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Hoxc9P09633 260 aa17.27■□□□□ 0.36
Shroom1-201ENSMUST00000018531 Arhgef1Q61210 920 aaKnown RBP17.26■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Nhsl1Q8CAF4 1587 aa17.26■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Hsp90aa1P07901 733 aaKnown RBP17.26■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Slx1bQ8BX32 270 aa17.26■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Gm21698A0A087WQP8 267 aa17.25■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Gm21671G3UY31 267 aa17.25■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Rsph6aQ8CDR2 708 aa17.25■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Dnajc10Q9DC23 793 aa17.25■□□□□ 0.35
Shroom1-201ENSMUST00000018531 TnikP83510 1323 aa17.25■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Nol11Q8BJW5 723 aaKnown RBP17.25■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Apbb1Q9QXJ1 710 aa17.24■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Kdm6aO70546 1401 aa17.24■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Irx3P81067 507 aa17.23■□□□□ 0.35
Shroom1-201ENSMUST00000018531 B4galnt3Q6L8S8 986 aa17.23■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Amotl2Q8K371 772 aa17.23■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Slc12a5Q91V14 1138 aa17.23■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Slit1Q80TR4 1531 aa17.22■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Eif4a2P10630 407 aa17.22■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Fchsd2Q3USJ8 740 aa17.22■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Pard3Q99NH2 1333 aa17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Map4k4P97820 1233 aaKnown RBP17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Neurod2Q62414 383 aa17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Speer4f1Q9D5Q6 258 aa17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 ChgaP26339 463 aaKnown RBP17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Tsen2Q6P7W5 460 aa17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Kat6bQ8BRB7 1872 aa17.21■□□□□ 0.35
Shroom1-201ENSMUST00000018531 Rwdd1Q9CQK7 243 aa17.2■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Ttc41Q692V3 1318 aa17.2■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Ncbp3Q8BZR9 615 aaKnown RBP17.19■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Plekhh1Q80TI1 1356 aa17.18■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Dbr1Q923B1 550 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Mbd3Q9Z2D8 285 aaKnown RBP17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Cntnap1O54991 1385 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Shank2Q80Z38 1476 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Fnbp4Q6ZQ03 1031 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Smim5Q8BT42 78 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Emilin2Q8K482 1074 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Acsbg1Q99PU5 721 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Txnrd1Q9JMH6 613 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Tmem132eQ6IEE6 982 aa17.17■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Trpm3Q5F4S9 1721 aa17.16■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Usp19Q3UJD6 1360 aa17.16■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Ccne1Q61457 408 aa17.16■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Ccdc30Q8BVF4 654 aa17.16■□□□□ 0.34
Shroom1-201ENSMUST00000018531 U2af1Q9D883 239 aaKnown RBP17.16■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Kdm2bQ6P1G2 1309 aa17.15■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Rab11fip3Q8CHD8 1047 aa17.15■□□□□ 0.34
Shroom1-201ENSMUST00000018531 TkfcQ8VC30 578 aa17.15■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Simc1E9Q6E9 1354 aa17.15■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Plcd4Q8K3R3 807 aa17.15■□□□□ 0.34
Shroom1-201ENSMUST00000018531 PalmQ9Z0P4 383 aa17.15■□□□□ 0.34
Shroom1-201ENSMUST00000018531 Arfgef2A2A5R2 1792 aa17.14■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Fgd1P52734 960 aa17.14■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Zeb2Q9R0G7 1215 aa17.14■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Plekhd1B2RPU2 505 aa17.14■□□□□ 0.33
Shroom1-201ENSMUST00000018531 CrklP47941 303 aa17.14■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Ciz1Q8VEH2 845 aa17.14■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Eya1P97767 591 aa17.13■□□□□ 0.33
Shroom1-201ENSMUST00000018531 OptnQ8K3K8 584 aa17.13■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Col15a1O35206 1367 aa17.13■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Lrp6O88572 1613 aa17.13■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Golga2Q921M4 999 aa17.13■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Tnks1bp1P58871 1720 aa17.12■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Nyap1Q6PFX7 833 aa17.12■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Ddx54Q8K4L0 874 aaKnown RBP17.12■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Adgrb1Q3UHD1 1582 aa17.11■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Uhrf1bp1B2KF50 1429 aa17.11■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Fer1l6E0CZ42 1862 aa17.11■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Cacna1sQ02789 1880 aa17.1■□□□□ 0.33
Shroom1-201ENSMUST00000018531 Sema6bO54951 886 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms