RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Insig1Q8BGI3 259 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Pak4Q8BTW9 593 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tbc1d17Q8BYH7 645 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Irak3Q8K4B2 609 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ndufs1Q91VD9 727 aaKnown RBP11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Osbpl1aQ91XL9 950 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Pdxdc1Q99K01 787 aaKnown RBP11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ecrg4Q99LS0 148 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Slc26a5Q99NH7 744 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Nudt8Q9CR24 210 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 MceeQ9D1I5 178 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 2010005H15RikQ9D8D6 97 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ift43Q9DA69 206 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ca7Q9ERQ8 264 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Akip1Q9JJR5 212 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 QkiQ9QYS9 341 aaKnown RBP11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gtf3c1Q8K284 2101 aa11.47□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cfap54Q8C6S9 3106 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ighv11-1A0A075B5R6 117 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Armt1A6H630 439 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gm3173A6NAS3 172 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gm14525B1AZA0 212 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gm2012B1B0R1 212 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gm1141B9EJU1 475 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vmn1r168K7N6B6 309 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Sema3aO08665 772 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 EdaO54693 391 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Chrna4O70174 629 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Stx7O70439 261 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Wipf3P0C7L0 485 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Rps6ka1P18653 724 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Bmp6P20722 510 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tpm3P21107 285 aaKnown RBP11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ap1g1P22892 822 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 PdgfraP26618 1089 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cdk4P30285 303 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ptger4P32240 513 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ccna2P51943 422 aaKnown RBP11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Atxn1P54254 791 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Ap1s1P61967 158 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Aup1P70295 410 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 StacP97306 403 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Csrp2P97314 193 aaKnown RBP11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mc1rQ01727 315 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mcm9Q2KHI9 1134 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Hdhd2Q3UGR5 259 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 FaxcQ3UMF9 409 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Sema3gQ4LFA9 780 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Fzd3Q61086 666 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Mtnr1aQ61184 353 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Six1Q62231 284 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Gm14819Q62478 212 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Klra3Q64329 266 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Bcl2l1Q64373 233 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cyp1b1Q64429 543 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tas2r102Q7M717 329 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Pnma8aQ80VM8 430 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 FicdQ8BIX9 458 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tarsl2Q8BLY2 790 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Sfr1Q8BP27 319 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Hus1Q8BQY8 280 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 P3h2Q8CG71 703 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cd209bQ8CJ91 325 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Pnpla8Q8K1N1 776 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Lgi4Q8K1S1 537 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Txndc11Q8K2W3 948 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Sirt3Q8R104 334 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Med17Q8VCD5 649 aaKnown RBP11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vmn1r71Q8VIC0 307 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 EpgnQ924X1 152 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Arl2Q9D0J4 184 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Vsig1Q9D2J4 407 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tor1bQ9ER41 336 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Tm9sf3Q9ET30 587 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Cldn19Q9ET38 224 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Anxa9Q9JHQ0 345 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 DmtnQ9WV69 405 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Rps6kb2Q9Z1M4 485 aa11.46□□□□□ -0.57
Ccdc28b-201ENSMUST00000030586 Igkv17-127A0A0G2JDN5 117 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Klhl41A2AUC9 606 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 NuggcD3YWJ0 796 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Serpina3iD3Z450 408 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Gm3460E9QAI8 215 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Klf6O08584 283 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 MlxO08609 298 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Eif3eP60229 445 aaKnown RBP11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Msx3P70354 204 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 SgcgP82348 291 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 ItkQ03526 625 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 St3gal2Q11204 350 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Lipo3Q3UT41 399 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 4930438A08RikQ5SPH3 536 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Fzd4Q61088 537 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Cct6bQ61390 531 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Syn2Q64332 586 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Sarm1Q6PDS3 724 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Q810S2 196 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Xylt1Q811B1 953 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Ttc34Q8C0Q3 554 aa11.45□□□□□ -0.58
Ccdc28b-201ENSMUST00000030586 Ano4Q8C5H1 955 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms