Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Gm25239-201ENSMUST00000174915 86 ntBASIC37.89■■■■□ 3.66
SgcgP82348 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SgcgP82348 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SgcgP82348 Gm15042-201ENSMUST00000120212 883 ntBASIC33.15■■■□□ 2.9
SgcgP82348 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
SgcgP82348 Gm24109-201ENSMUST00000175489 103 ntBASIC32.8■■■□□ 2.84
SgcgP82348 Gm15045-201ENSMUST00000117359 883 ntBASIC32.45■■■□□ 2.79
SgcgP82348 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SgcgP82348 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SgcgP82348 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
SgcgP82348 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
SgcgP82348 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SgcgP82348 Gm23366-201ENSMUST00000175022 89 ntBASIC31.62■■■□□ 2.65
SgcgP82348 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SgcgP82348 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SgcgP82348 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SgcgP82348 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.86■■■□□ 2.53
SgcgP82348 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
SgcgP82348 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SgcgP82348 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.59■■■□□ 2.49
SgcgP82348 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
SgcgP82348 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.42■■■□□ 2.46
SgcgP82348 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SgcgP82348 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
SgcgP82348 Psd-208ENSMUST00000224556 2034 ntBASIC30.35■■■□□ 2.45
SgcgP82348 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SgcgP82348 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
SgcgP82348 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SgcgP82348 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
SgcgP82348 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.15■■■□□ 2.42
SgcgP82348 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SgcgP82348 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SgcgP82348 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SgcgP82348 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SgcgP82348 Gm25238-201ENSMUST00000174914 89 ntBASIC29.9■■■□□ 2.38
SgcgP82348 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.81■■■□□ 2.36
SgcgP82348 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
SgcgP82348 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.64■■■□□ 2.33
SgcgP82348 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SgcgP82348 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SgcgP82348 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SgcgP82348 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SgcgP82348 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.24■■■□□ 2.27
SgcgP82348 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
SgcgP82348 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.17■■■□□ 2.26
SgcgP82348 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
SgcgP82348 Gm27325-201ENSMUST00000175467 74 ntBASIC29.07■■■□□ 2.24
SgcgP82348 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SgcgP82348 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.05■■■□□ 2.24
SgcgP82348 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
SgcgP82348 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.93■■■□□ 2.22
SgcgP82348 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SgcgP82348 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.89■■■□□ 2.22
SgcgP82348 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
SgcgP82348 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.81■■■□□ 2.2
SgcgP82348 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.72■■■□□ 2.19
SgcgP82348 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SgcgP82348 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SgcgP82348 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
SgcgP82348 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SgcgP82348 Gm25262-201ENSMUST00000174934 133 ntBASIC28.56■■■□□ 2.16
SgcgP82348 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SgcgP82348 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.5■■■□□ 2.15
SgcgP82348 Rab21-202ENSMUST00000218831 843 ntBASIC28.48■■■□□ 2.15
SgcgP82348 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SgcgP82348 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.39■■■□□ 2.14
SgcgP82348 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SgcgP82348 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SgcgP82348 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
SgcgP82348 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.34■■■□□ 2.13
SgcgP82348 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
SgcgP82348 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SgcgP82348 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SgcgP82348 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.26■■■□□ 2.11
SgcgP82348 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SgcgP82348 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SgcgP82348 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SgcgP82348 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SgcgP82348 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
SgcgP82348 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
SgcgP82348 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SgcgP82348 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.16■■■□□ 2.1
SgcgP82348 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SgcgP82348 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.06■■■□□ 2.08
SgcgP82348 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
SgcgP82348 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.04■■■□□ 2.08
SgcgP82348 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.04■■■□□ 2.08
SgcgP82348 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SgcgP82348 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.01■■■□□ 2.07
SgcgP82348 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
SgcgP82348 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SgcgP82348 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.93■■■□□ 2.06
SgcgP82348 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
SgcgP82348 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
SgcgP82348 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
SgcgP82348 Gm26115-201ENSMUST00000175605 87 ntBASIC27.81■■■□□ 2.04
SgcgP82348 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
SgcgP82348 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SgcgP82348 Gm8109-201ENSMUST00000194076 746 ntBASIC27.73■■■□□ 2.03
SgcgP82348 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.72■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms